EY702515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS6_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.945e-50 Identity = 90/124 (72.58%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +V CM+VWPP GLKKFETLSYLPPLS E L KE+ YL+R W+PC+EF E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDN VQCISFIA KP Sbjct: 54 RVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS5_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.945e-50 Identity = 90/124 (72.58%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +V CM+VWPP GLKKFETLSYLPPLS E L KE+ YL+R W+PC+EF E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDN VQCISFIA KP Sbjct: 54 RVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS4_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.945e-50 Identity = 90/124 (72.58%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +V CM+VWPP GLKKFETLSYLPPLS E L KE+ YL+R W+PC+EF E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDN VQCISFIA KP Sbjct: 54 RVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS3_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.945e-50 Identity = 90/124 (72.58%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +V CM+VWPP GLKKFETLSYLPPLS E L KE+ YL+R W+PC+EF E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDN VQCISFIA KP Sbjct: 54 RVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS2_SPIOL (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.299e-49 Identity = 82/126 (65.08%), Postives = 103/126 (81.75%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 +VQCMKVWP +K++ETLSYLPPL+ + L +++ YL+ W+PCLEFE + G+VYREHH SPGYYDGRYWTMWKLPM+GCTD QVL E+ E +KEYP++F+RIIGFD+ VQC+SFIA KP G Sbjct: 54 RVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPAG 179
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS5_FRIAG (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Fritillaria agrestis GN=RBCS5 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.216e-49 Identity = 89/124 (71.77%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +VQCMKVWP GLKKFETLSYLP LS E+LLK+I YLIR GW+PCLEF LE G+V R+++KSPGYYDGRYWTMWKLPM+GCT A QV+KE E +KEYP +F+R+IGFDN VQC+SFI KP Sbjct: 56 RVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTGAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.446e-49 Identity = 87/124 (70.16%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +V+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFEL KG+VY EH+KSP YYDGRYWTMWKLPM+G TD QV+KEV EV YP +FVR+IGF+N VQCISFIA P Sbjct: 10 RVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVYGEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTP 133
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS1_LEMGI (Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 6.446e-49 Identity = 89/124 (71.77%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +V CM+VWPP GLKKFETLSYLPPLS E L KE+ YL+R W+PC+EF E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDN VQCISFIA KP Sbjct: 50 RVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENNASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 172
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_SILPR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Silene pratensis GN=RBCS PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.100e-48 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +V CM+VWPP LKKFETLSYLP LS+E+LLKEI+YL+ GW+PCLEFE+ VYRE++KSPGYYDGRYWTMWKLPM+GCTDA+QV EV E + YP + VRIIGFDN VQCISFIA KP Sbjct: 53 RVNCMQVWPPRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEFEVGPAHVYRENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAEVVECKNAYPDAHVRIIGFDNKRQVQCISFIAYKP 176
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_ZANAE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.876e-48 Identity = 88/126 (69.84%), Postives = 102/126 (80.95%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 +V+CM+VWPP G KKFETLSYLPPL+ E L +E+ YLIR GWIPC+EF + G+VYRE+H SPGYYDGRYWTMWKLPM+GCTD++QVLKEV E K YP F RIIGFDN VQCISF+ KP G Sbjct: 53 RVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEF-CKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKPEG 177 The following BLAST results are available for this feature:
BLAST of EY702515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702515 ID=EY702515; Name=EY702515; organism=Citrus sinensis; type=EST; length=861bpback to top |