EY702515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 3.199e-48 Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 +VQCM+VWPP G KKFETLSYLP L+ L KE+ YL+R+ WIPCLEFELE+G+V+R++ P YYDGRYWTMWKLPM+GCTD+ QVL+E+ +KEYP++F+RIIGFDN VQCISFIA KP G Sbjct: 56 RVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKG 181
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_AEGTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.588e-47 Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 +++CM+VWP G+KKFETLSYLPPLS E LLK++ YLIR+ W+PCLEF + G+++REH+ SPGYYDGRYWTMWKLPM+GC TQV+ EV EV+KEYP + RIIGFDN VQ +SFIA+KPPG Sbjct: 44 RIRCMQVWPIEGIKKFETLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFR-KVGFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKEYPDPYCRIIGFDNMRQVQSVSFIASKPPG 168
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_MAIZE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.911e-46 Identity = 84/126 (66.67%), Postives = 100/126 (79.37%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 +++CM+VWP G KKFETLSYLPPLS + LLK++ YL+R GWIPCLEF + G+VYRE+ SP YYDGRYWTMWKLPM+GC DATQV KE+ E K YP +F R+IGFDN QC+SFIA KPPG Sbjct: 44 RIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFS-KVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRVIGFDNIKQTQCVSFIAYKPPG 168
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS1_SPIOL (Ribulose bisphosphate carboxylase small chain OS=Spinacia oleracea GN=RBCS PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.138e-45 Identity = 85/122 (69.67%), Postives = 99/122 (81.15%), Query Frame = 1 Query: 16 MKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 M+VWPP GLKKFETLSYLPPL+ E LL E++YL+ GWIP LEFE++ G+VYREH KSPGYYDGRYWTMWKLPM+G TD QV+ EV EV+K P +FVR IGF++ VQCISFIA KP G Sbjct: 1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPGYYDGRYWTMWKLPMFGGTDPAQVVNEVEEVKKAPPDAFVRFIGFNDKREVQCISFIAYKPAG 122
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_PINTH (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.633e-45 Identity = 79/124 (63.71%), Postives = 101/124 (81.45%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +V+CM+VWPP G KFETLSYLP L++E L+KE+ YL+R W+PCLEF+LE G + R++++SPGYYDGRYW MWKLPM+GCT+A+QV+ EV E K YP +F+R+IGFDN VQCISFI KP Sbjct: 48 RVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLE-GSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_LARLA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.817e-43 Identity = 79/124 (63.71%), Postives = 97/124 (78.23%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 +V+CM+VWPP KKFETLSYLP L+ E L+KE+ YL++ W+PCLEFE E G + R + SPGYYDGRYW MWKLPM+GCT+A+QVL EV E K YP++F+R+IGFDN VQCISFI KP Sbjct: 64 RVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFE-EDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS3_WHEAT (Ribulose bisphosphate carboxylase small chain clone 512 (Fragment) OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.016e-43 Identity = 77/107 (71.96%), Postives = 93/107 (86.92%), Query Frame = 1 Query: 61 SYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 +YLPPLS EALLK++ YLIR+ W+PCLEF + G+++REH+ SPGYYDGRYWTMWKLPM+GCTDATQV+ EV EV+KEYP ++VRIIGFDN VQC+SFIA KPPG Sbjct: 1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 106
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_SACHY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.144e-40 Identity = 77/126 (61.11%), Postives = 94/126 (74.60%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 +++CM+VWP G KKFETLSYLPPL+ E LLK++ YL+R W+PCLEF E G+VYRE+ SP YYDGRYWTMWKLPM+GCTDA+QV KE+ E YP I+GFDN Q ++FIA KP G Sbjct: 43 RIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKE-GFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYP-ELRAILGFDNIRQTQWLTFIAYKPAG 166
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_MARPA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.686e-38 Identity = 72/125 (57.60%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEY-PHSFVRIIGFDNGAAVQCISFIAAKP 375 +V CM+VW P KFETLSYLPPLS +AL K+I Y+I++GW PC+EF+++ G V RE PGYYDGRYWTMWKLPM+GCTD+ VL+E+ E +K Y ++R +GFDN VQC SFI +P Sbjct: 55 RVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQ-GTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFIVHQP 178
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.595e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 16 MKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 MKVW P KKFET SYLPPLSD + K++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ VQ ISF+ +P G Sbjct: 135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 262 HSP 2 Score: 136.732 bits (343), Expect = 1.595e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 16 MKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 MKVW P KKFET SYLPPLSD + K++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ VQ ISF+ +P G Sbjct: 279 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 406 HSP 3 Score: 136.732 bits (343), Expect = 1.595e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 16 MKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 MKVW P KKFET SYLPPLSD + K++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ VQ ISF+ +P G Sbjct: 566 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 693 HSP 4 Score: 136.732 bits (343), Expect = 1.595e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 16 MKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 MKVW P KKFET SYLPPLSD + K++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ VQ ISF+ +P G Sbjct: 709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 836 HSP 5 Score: 136.732 bits (343), Expect = 1.595e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 16 MKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 MKVW P KKFET SYLPPLSD + K++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ VQ ISF+ +P G Sbjct: 997 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 1124 HSP 6 Score: 134.806 bits (338), Expect = 6.062e-31 Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 16 MKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 MKVW P KKFET SYLPPLSD + K++ +I G PCLEF E ++ ++ + GYYD YWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ VQ ISF+ +P G Sbjct: 422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 549 HSP 7 Score: 134.806 bits (338), Expect = 6.062e-31 Identity = 63/126 (50.00%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 16 MKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375 MKVW P KKFET SYLPPLSD + K++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ VQ ISF+ +P Sbjct: 1141 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 1266 HSP 8 Score: 132.494 bits (332), Expect = 3.008e-30 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 16 MKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381 MKVW P KKFET SYLPPLSD + K++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP +VR + FD+ VQ ISF+ +P G Sbjct: 854 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVISFVVQRPSG 980 The following BLAST results are available for this feature:
BLAST of EY702515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702515 ID=EY702515; Name=EY702515; organism=Citrus sinensis; type=EST; length=861bpback to top |