DY257627

Overview
NameDY257627
Unique NameDY257627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY257627 vs. ExPASy Swiss-Prot
Match: RL32_SULIA (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl32e PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.172e-12
Identity = 34/98 (34.69%), Postives = 59/98 (60.20%), Query Frame = 2 
Query:   11 KISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNK 304
            ++  +E WRRP G D++ R K +G   + ++GY   K+ R + P+G ++ +VHNVN+L  +     +    IA +V  KKR EI+ +A +L + V+N+
Sbjct:   37 RLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
The following BLAST results are available for this feature:
BLAST of DY257627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
RL32_SULIA3.172e-1234.6950S ribosomal protein L32e OS=Sulfolobus islandicu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CC06FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257627 ID=DY257627; Name=DY257627; organism=Citrus sinensis; type=EST; length=520bp
GAGTGACAGGAAGATATCAGTGAAGGAAAATTGGCGAAGGCCGAAGGGTA
TTGATTCACGTGTCAGGAGAAAGTTCAAAGGATGTGTTCTGATGCCCAAT
ATTGGCTACGGCTCGGACAAGAAAACACGCCACTATCTGCCCAATGGATT
CAAGAAGTTTGTTGTGCACAATGTCAATGAACTGGAACTCTTGATGATGC
ACAACAGGACTTATTGTGCTGAGATAGCCCACAACGTATCAACCAAGAAG
AGAAAGGAGATTGTCGAGCGTGCTGCACAATTGGATGTTGTGGTCACCAA
CAAATTGGCCAGGTTGCGCAGCCAGGAGGAGGAGTAAAAATTGGTTTCTA
TATTTTATGTTAGTGTTTGCTTTTGGCCAAATGTTTCCTAGGTTGTCTTT
GGAATGGATGAACATTTCCAGGGTTGAATTATGATGTATTTTCTATTTTT
GTCACCTGAATGATATTTTGAATTTGTTGTTTTTTGCGGAGCATGATTAA
TGTTATGTCAACTTAGGAGT
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