EY702513

Overview
NameEY702513
Unique NameEY702513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25
Identity = 51/138 (36.96%), Postives = 84/138 (60.87%), Query Frame = 3
Query:  219 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 590
            ++L +L K+P    SAG + + D++ W+  I+GPPD+ Y GGVF   + FP DYP +PPK+ F T+++HPN++ NG +C+ IL             +E+W P  T+  +++S+ S+L DPN D P   + A  ++ D+
Sbjct:   12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149          
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25
Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 3
Query:  213 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQ 626
            + KE+  L  DPP      P  ED+   Q TI GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+ +NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y A AR  T+
Sbjct:   16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.529e-25
Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 3
Query:  213 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQ 626
            + KE+  L  DPP      P  ED+   Q TI GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+ +NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y A AR  T+
Sbjct:   16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25
Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 3
Query:  204 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 602
            SKR+ +EL+ L        +A P  +++F W AT+ GP D+ Y    + +T+ FP DYP+KPP V F T  +HPN++ +G+ICLDILKE W+ +  +  +LLS+ SLL +PN   PL  + A M+ S++ +Y+
Sbjct:   32 SKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYK 163          
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.528e-25
Identity = 51/138 (36.96%), Postives = 83/138 (60.14%), Query Frame = 3
Query:  219 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE-------------QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 590
            ++L +L K+P    SAG + + D++ W+  I+GPPD+ Y GGVF   + FP DYP +PPK+ F T+++HPN++ NG +C+ IL E             +W P  T+  +++S+ S+L DPN D P   + A  ++ D+
Sbjct:   12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149          
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24
Identity = 57/138 (41.30%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  213 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQ 626
            + KE+  L  DPP      P  ED+   Q TI GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+  NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y A AR  T+
Sbjct:   16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24
Identity = 57/138 (41.30%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  213 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQ 626
            + KE+  L  DPP      P  ED+   Q TI GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+  NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y A AR  T+
Sbjct:   16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24
Identity = 62/149 (41.61%), Postives = 87/149 (58.39%), Query Frame = 3
Query:  207 KRILKELKDLQK-DPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS-DKAKYEATARSWTQKYAMG 641
            KR+ KE    Q  D        PV + DMFHW+A I GP ++PY GG +++ IH    YP  PP V F+TK+ HPNI+ +NG +C+DILK  WSPA ++    L+I SLL++ +   PL  + A + ++ DK  Y +  R  T  YA G
Sbjct:    6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154          
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24
Identity = 57/147 (38.78%), Postives = 87/147 (59.18%), Query Frame = 3
Query:  201 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 599
            AS  + K+LKDL K P    SAG V E ++F W  +IMGPPD+ Y GG F   + FP +YP  PP V F ++++HPN+ S+G +C+ IL              E+W+P  T+  ++LSI S+L+ PN + P   E A  ++ ++A++
Sbjct:    6 ASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEF 152          
BLAST of EY702513 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.114e-24
Identity = 56/145 (38.62%), Postives = 82/145 (56.55%), Query Frame = 3
Query:  207 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 641
            +R+ KE+  L  DPP      P  ED+   Q  I GP  +PYA G+F + +    D+P  PPK  F TK+FHPN+++NG IC+++LK+ W   L I  VLL+I  LL  PNP+  L  E   +   +  +Y + A+  T+ +A G
Sbjct:   14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVHIEGPEGTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAKLMTEIHAQG 158          
The following BLAST results are available for this feature:
BLAST of EY702513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
UB2G1_HUMAN4.999e-2536.96Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens... [more]
UBE2S_HUMAN6.529e-2541.30Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens ... [more]
UBE2S_BOVIN6.529e-2541.30Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN... [more]
UBE2C_SPISO8.528e-2541.35Ubiquitin-conjugating enzyme E2 C OS=Spisula solid... [more]
UB2G1_MACFA8.528e-2536.96Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fasci... [more]
UBE2S_RAT1.114e-2441.30Ubiquitin-conjugating enzyme E2 S OS=Rattus norveg... [more]
UBE2S_MOUSE1.114e-2441.30Ubiquitin-conjugating enzyme E2 S OS=Mus musculus ... [more]
UBC16_SCHPO1.114e-2441.61Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccha... [more]
UBC14_ARATH1.114e-2438.78Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis ... [more]
UB2SC_XENLA1.114e-2438.62Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus lae... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702513 ID=EY702513; Name=EY702513; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCTTGAATAACAAAGGCAAGAGATTGTAGAGGAGAGAGGT
CGGGACGGCCAGTAGCCGCCGCAGATCTGCTCCGAAGCCGTTCCCCTTTC
TCACTGCTATTGCCCTCCGATCTCCTTCTTCGGCGGACAAGTGTTGCAGA
TCCTAGGTTTGTTGTGGCTTTAACTTTTAATAATCCGTTGAAGCATCATG
GCTTCGAAGCGTATTTTGAAGGAACTCAAGGATTTGCAGAAGGATCCTCC
CACGTCTTGCAGCGCTGGTCCGGTGGCTGAAGACATGTTCCATTGGCAAG
CAACAATTATGGGCCCCCCTGATAGTCCATATGCAGGAGGTGTATTTTTG
GTTACCATTCATTTTCCTCCAGATTATCCCTTCAAGCCCCCAAAGGTTGC
TTTTAGGACCAAGGTCTTCCACCCAAACATCAACAGCAATGGAAGCATAT
GTCTTGATATCCTTAAAGAACAGTGGAGCCCAGCTCTTACCATTTCAAAG
GTCCTGCTTTCTATCTGCTCGTTGCTTACTGACCCAAATCCTGACGACCC
GCTTGTACCGGAGATTGCTCACATGTACAAGTCCGACAAGGCCAAATATG
AAGCCACTGCCAGGAGCTGGACACAGAAGTATGCCATGGGATAGTTGTTT
GGATATTGCAGAAATGGAACNTCATTATATGGAATATGGTGGGGTTTTTT
CTCCTTTTTCTTCAATCCTGCTTCGGGAGGGGATGGTTTGTATTTTTATA
ATGAGGAAGATGGTTGGGGAGGAGTTGCAGGGCAAGACAATTTGGTAATG
GGGATGGTTATTGGTTGAACCCCATCATTCATGGGGTTTGTGGCCCAAAA
AAAAAAAAAGGCGGCGCC
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