EY702512

Overview
NameEY702512
Unique NameEY702512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CHLVU (ATP synthase subunit a, chloroplastic OS=Chlorella vulgaris GN=atpI PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.177e-48
Identity = 98/135 (72.59%), Postives = 106/135 (78.52%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL+PW+I+ELP+GELAAPTNDINTT ALALLTSIAYFYAG+SKKGLGYF +YI P   LLPINILED TKPLSLSFRLFGNILADE                  M LGLFTS IQAL+FATLA AYIGES+E HH
Sbjct:  113 ALIPWRILELPNGELAAPTNDINTTVALALLTSIAYFYAGISKKGLGYFKRYISPAAFLLPINILEDLTKPLSLSFRLFGNILADELVVGVLVSLVPLVVPIPIMLLGLFTSAIQALVFATLAGAYIGESVEDHH 247          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_GALSU (ATP synthase subunit a, chloroplastic OS=Galdieria sulphuraria GN=atpI PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.537e-48
Identity = 99/134 (73.88%), Postives = 108/134 (80.60%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGH 413
            AL+PWK+I LP GEL+APTNDINTT ALALLTS+AYFYAG+SKKGL YFS+YI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLF S IQALIFATLAAAYIGE++E H
Sbjct:  100 ALIPWKMIILPEGELSAPTNDINTTAALALLTSLAYFYAGISKKGLRYFSRYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVSVLTLLVPLIVPLPVMMLGLFASSIQALIFATLAAAYIGEAIEEH 233          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP6_THEEB (ATP synthase subunit a OS=Thermosynechococcus elongatus (strain BP-1) GN=atpB PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.537e-48
Identity = 98/134 (73.13%), Postives = 107/134 (79.85%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGH 413
            AL+PWK+IELP GELAAPTNDINTT ALALL S+AYFYAGL K+GL YF+KYI+PTP+LLPI ILEDFTKPLSLSFRLFGNILADE                  M LGLFTS IQAL+FATLAA YIGE+MEGH
Sbjct:  110 ALVPWKLIELPEGELAAPTNDINTTVALALLVSLAYFYAGLRKRGLKYFTKYIEPTPVLLPIAILEDFTKPLSLSFRLFGNILADELVVSVLVLLVPLFVPLPVMVLGLFTSAIQALVFATLAATYIGEAMEGH 243          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP6_NOSP7 (ATP synthase subunit a OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpB PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.537e-48
Identity = 98/134 (73.13%), Postives = 107/134 (79.85%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGH 413
            AL+PWK+I+LP GELAAPTNDINTT ALALLTS+AYFYAG SK+GLGYF KYI+PTP+LLPI ILEDFTKPLSLSFRLFGNILADE                  M LGLFTS IQAL+FATLA AYI E+MEGH
Sbjct:  112 ALIPWKLIKLPSGELAAPTNDINTTVALALLTSLAYFYAGFSKRGLGYFKKYIEPTPVLLPIAILEDFTKPLSLSFRLFGNILADELVVAVLVLLVPLFVPLPVMALGLFTSAIQALVFATLAGAYIHEAMEGH 245          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP6_SYNP1 (ATP synthase subunit a OS=Synechococcus sp. (strain PCC 6716) GN=atpB PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.007e-48
Identity = 98/134 (73.13%), Postives = 107/134 (79.85%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGH 413
            AL+PWK+IELP GELAAPTNDINTT ALALL S+AYFYAGL K+GL YF+KYI+PTP+LLPI ILEDFTKPLSLSFRLFGNILADE                  M LGLFTS IQAL+FATLAA YIGE+MEGH
Sbjct:  110 ALVPWKLIELPEGELAAPTNDINTTVALALLVSLAYFYAGLRKRGLKYFTKYIEPTPVLLPIAILEDFTKPLSLSFRLFGNILADELVVGVLVLLVPLFVPLPVMALGLFTSAIQALVFATLAATYIGEAMEGH 243          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PSEAK (ATP synthase subunit a, chloroplastic OS=Pseudendoclonium akinetum GN=atpI PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 96/135 (71.11%), Postives = 104/135 (77.04%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL+PW I E+P+GELAAPTNDINTT ALALLTS AYFYAG SKKGLGYF +Y+ P   LLPIN+LEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQAL+FATLA AYIGES+E HH
Sbjct:  113 ALIPWHIFEIPNGELAAPTNDINTTVALALLTSTAYFYAGFSKKGLGYFKRYVSPAAFLLPINVLEDFTKPLSLSFRLFGNILADELVVGVLVALVPLVVPIPIMLLGLFTSGIQALVFATLAGAYIGESIEDHH 247          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_OLTVI (ATP synthase subunit a, chloroplastic OS=Oltmannsiellopsis viridis GN=atpI PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.472e-48
Identity = 95/135 (70.37%), Postives = 106/135 (78.52%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL+PW +IELP GELAAPTNDINTT ALALLTSIAYFYAG++KKGLGYF +Y++P   LLPIN+LEDFTKPLSLSFRLFGNILADE                  M LGLFTS IQAL+F+TLA AYIGES+E HH
Sbjct:  112 ALVPWALIELPSGELAAPTNDINTTVALALLTSIAYFYAGINKKGLGYFKRYVEPAAFLLPINVLEDFTKPLSLSFRLFGNILADELVTGVLVALVPLVIPIPLMLLGLFTSAIQALVFSTLAGAYIGESLEDHH 246          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_GUITH (ATP synthase subunit a, chloroplastic OS=Guillardia theta GN=atpI PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.840e-48
Identity = 94/134 (70.15%), Postives = 108/134 (80.60%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGH 413
            AL+PWK+I+LP GELAAPTNDIN T ALALLTSI+YFYAG+SKKG+ YFS+Y+QPTPILLPINILEDFTKPLSLSFRLFGN+LADE                  M LGLF S +QALIF+TL+AAYIGE++E H
Sbjct:  113 ALIPWKLIQLPEGELAAPTNDINVTVALALLTSISYFYAGISKKGISYFSRYVQPTPILLPINILEDFTKPLSLSFRLFGNVLADELVVSVFALLVPILIPLPVMTLGLFASSVQALIFSTLSAAYIGEALEDH 246          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_STIHE (ATP synthase subunit a, chloroplastic OS=Stigeoclonium helveticum GN=atpI PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.627e-48
Identity = 94/135 (69.63%), Postives = 107/135 (79.26%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPW++IE+P+GELAAPTNDINTT ALALLTSI+YFYAG+ KKGLGYF +Y+QP   LLPIN+LEDF+KPLSLSFRLFGNILADE                  M LG+FTS IQAL+FATLA AYIGES+E HH
Sbjct:  112 ALLPWRLIEIPNGELAAPTNDINTTVALALLTSISYFYAGIRKKGLGYFKRYVQPAVFLLPINVLEDFSKPLSLSFRLFGNILADELVVGVLVALVPLIVPIPVMLLGVFTSAIQALVFATLAGAYIGESVEDHH 246          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CYACA (ATP synthase subunit a, chloroplastic OS=Cyanidium caldarium GN=atpI PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.962e-48
Identity = 96/135 (71.11%), Postives = 107/135 (79.26%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL+PWK+I++P GELAAPTNDINTT ALA+LTS++YFYAGLSKKGL YF KYI PTPILLPINILEDFTKPLSLSFRLFGNI+ADE                  M LGLF S IQALIFATL+A+YIGES+  HH
Sbjct:  105 ALVPWKLIKIPEGELAAPTNDINTTVALAMLTSVSYFYAGLSKKGLRYFLKYISPTPILLPINILEDFTKPLSLSFRLFGNIVADELVVAVFNLLFPLFLPLPVMVLGLFASSIQALIFATLSASYIGESLADHH 239          
The following BLAST results are available for this feature:
BLAST of EY702512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
ATPI_CHLVU1.177e-4872.59ATP synthase subunit a, chloroplastic OS=Chlorella... [more]
ATPI_GALSU1.537e-4873.88ATP synthase subunit a, chloroplastic OS=Galdieria... [more]
ATP6_THEEB1.537e-4873.13ATP synthase subunit a OS=Thermosynechococcus elon... [more]
ATP6_NOSP71.537e-4873.13ATP synthase subunit a OS=Nostoc punctiforme (stra... [more]
ATP6_SYNP12.007e-4873.13ATP synthase subunit a OS=Synechococcus sp. (strai... [more]
ATPI_PSEAK3.424e-4871.11ATP synthase subunit a, chloroplastic OS=Pseudendo... [more]
ATPI_OLTVI4.472e-4870.37ATP synthase subunit a, chloroplastic OS=Oltmannsi... [more]
ATPI_GUITH5.840e-4870.15ATP synthase subunit a, chloroplastic OS=Guillardi... [more]
ATPI_STIHE7.627e-4869.63ATP synthase subunit a, chloroplastic OS=Stigeoclo... [more]
ATPI_CYACA9.962e-4871.11ATP synthase subunit a, chloroplastic OS=Cyanidium... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702512 ID=EY702512; Name=EY702512; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGG
GAGTTAGCCGCACCCACGAATGATATAAATACTACCGGTGCTTTAGCTTT
GCTCACGTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAG
GCTATTTCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAAC
ATTTTAGAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGG
GAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTAC
CTTTAGTGGGTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGT
ATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATC
TATGGAGGGACATCATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCT
TAGAACAAAGGCAATGGATGCGTAACTCAAGATAATCTACTTATACTTCT
ACTTAGGAAAAATACATATCCAAACATAAATCTACAAATACCGCATATAC
GATCAAGAGTCGTAGAAAAAAATTACGATATTGGGGGACTGTANGGAAGA
GATCTAAAGGGATCTTTTTCCTCAAATCCCTCTTTGGCCCTATATATCAT
CCCCCCCTCTCCCCGCCAATAAAATTGTCCTAATATGGGTTGGGCCATTC
TGGGGCATTCAATTCCAATAGGCAAATACCAGAGGGAGTAGGTGGATAAA
AATCCCTATAGTATCCCAGGGGGGGGGATTAACAAAAAGGAAAAAAGGTG
GTTTATAAAAAAATCCCCCTTTAGTGGATTTAGGCCATTCCTCATTCTAC
CGTGGGCCAAAGGGAAATTTATTATATAATGGGTTGGGCGGACCTCAAT
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