EY702512

Overview
NameEY702512
Unique NameEY702512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP62_PELCD (ATP synthase subunit a 2 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpB2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11
Identity = 39/124 (31.45%), Postives = 60/124 (48.39%), Query Frame = 3
Query:   57 AAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQP----TPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            A PT  +NT  ALA+   +     G+ + G+ YF  ++ P    TP++LPI ++    +PLSLS RLFGN+   E                  M +G+  + IQ  +F  L+  YI  ++E  H
Sbjct:  111 APPTASLNTNAALAVGVFLVTHIVGVREHGIRYFKHFMGPVWWLTPLILPIELIGHLARPLSLSLRLFGNMYGHEIVLMIFFSLVPLLLPIPMMLMGILVAFIQTFVFMLLSMIYIAGALEEAH 234          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP61_PELPD (ATP synthase subunit a 1 OS=Pelobacter propionicus (strain DSM 2379) GN=atpB1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11
Identity = 40/122 (32.79%), Postives = 59/122 (48.36%), Query Frame = 3
Query:   63 PTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQP----TPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            PT +INTT A A++  IA    G+ + G+GY   +  P     P++  I ++   ++PLSL+ RLFGN+   E                  M +G+  S IQA +F  L   YI  S+E  H
Sbjct:  108 PTANINTTAACAIVVFIATHVVGIKRHGIGYIKHFCGPILWLAPVMFFIEVIGHLSRPLSLTLRLFGNMNGHELVLIIFFGLAPFLVPLPMMLMGVLVSFIQAFVFMLLTMIYIQGSLEEAH 229          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP63_PELPD (ATP synthase subunit a 3 OS=Pelobacter propionicus (strain DSM 2379) GN=atpB3 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11
Identity = 39/122 (31.97%), Postives = 60/122 (49.18%), Query Frame = 3
Query:   63 PTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQP----TPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            PT +INTT A A++  ++    G+ + G+GY   +  P    TPI+  I ++   ++P+SL+ RLFGN+   E                  M +G+  S IQA +F  L   YI  S+E  H
Sbjct:  108 PTANINTTAACAIVVFLSTHVVGIKRHGIGYIKHFCGPILWLTPIMFFIEVIGHLSRPVSLTLRLFGNMNGHELVLIIFFGLAPFLVPLPMMLMGVLVSFIQAFVFMLLTMIYIQGSLEEAH 229          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP6_PROMO (ATP synthase subunit a, sodium ion specific OS=Propionigenium modestum GN=atpB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11
Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 3
Query:   54 LAAPTNDINTTGALALLTSIAYFYAGLSKKGL-GYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILAD-EXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESM 404
            L  PT D+NTT  LALLT+ ++  A     G  G+F    +P P++ PIN+  +F KP ++S RLFGN+ A                     ++  LF+  +Q+ +F  L   YI  S+
Sbjct:  163 LRTPTADLNTTVGLALLTTYSFIAASFRTSGFFGFFKGLFEPMPLMFPINLAGEFAKPTNISIRLFGNMFAGMVILGLLYKAAPVLIPAPLHLYFDLFSGVVQSFVFIMLTMVYIQGSI 281          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP62_METCA (ATP synthase subunit a 2 OS=Methylococcus capsulatus GN=atpB2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11
Identity = 36/117 (30.77%), Postives = 62/117 (52.99%), Query Frame = 3
Query:   60 APTNDINTTGALALLTSIAYFYAGLSKKGLG-YFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESME 407
            +PT D++ T ALA+L   +  + G+ ++GL  Y   Y+ P P+LLP +++ + T+ L+L+ RLFGN+++ E                  + L +    +QA IF  LA  YI   ++
Sbjct:  102 SPTRDLSVTSALAVLVFFSVHWFGIRQQGLSAYLKHYLTPNPVLLPFHLIGEITRTLALAIRLFGNMMSMELIGLLLLIIGGLFVPVPVLLLHVVEGLVQAYIFGILALVYIAGGIQ 218          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP6_GEOMG (ATP synthase subunit a OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=atpB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 40/122 (32.79%), Postives = 59/122 (48.36%), Query Frame = 3
Query:   63 PTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQP----TPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            PT ++NTT A A++  ++    G+ K G  Y   ++ P     P++  I I+   ++PLSLS RLFGN+   E                  M +G+  S IQA +F  LA  YI  S+E  H
Sbjct:  108 PTANLNTTAACAIIVFLSTHVVGIKKHGFHYLQHFMGPIWWLAPLMFFIEIIGHLSRPLSLSLRLFGNMNGHELVLMIFFALAPFLVPLPMMLMGVLVSFIQAFVFMLLAMIYIQGSLEEAH 229          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP6_GEOSL (ATP synthase subunit a OS=Geobacter sulfurreducens GN=atpB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11
Identity = 40/122 (32.79%), Postives = 59/122 (48.36%), Query Frame = 3
Query:   63 PTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQP----TPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            PT ++NTT A A++  ++    G+ K G  Y   ++ P     P++  I I+   ++PLSLS RLFGN+   E                  M +G+  S IQA +F  LA  YI  S+E  H
Sbjct:  108 PTANLNTTAACAVIVFLSTHIVGIKKHGFHYLQHFMGPIWWLAPLMFFIEIIGHLSRPLSLSLRLFGNMNGHELVLMIFFALAPFLVPLPMMLMGVLVSFIQAFVFMLLAMIYIQGSLEEAH 229          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATP6_ARCB4 (ATP synthase subunit a OS=Arcobacter butzleri (strain RM4018) GN=atpB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11
Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 3
Query:   60 APTNDINTTGALALLTSIAYFYAGLSKKG-LGYFSKYIQPTPIL----LPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            APT++IN T +LAL+  + Y Y G+ K G + YF  ++ P P+L     PI I+   ++ +SLSFRLFG+I  D+                   FL      +QA IF+ L   YI  S+   H
Sbjct:  102 APTSNINFTLSLALIVFVYYNYLGIKKNGFVAYFKHFMGPMPVLAPLMFPIEIISHLSRIVSLSFRLFGSIRGDDMFLMVLLMLVPWILPLPGFFLLTAFGVLQAFIFSILTYVYIAGSIMMEH 225          
The following BLAST results are available for this feature:
BLAST of EY702512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
ATP62_PELCD1.150e-1131.45ATP synthase subunit a 2 OS=Pelobacter carbinolicu... [more]
ATP61_PELPD1.502e-1132.79ATP synthase subunit a 1 OS=Pelobacter propionicus... [more]
ATP63_PELPD2.563e-1131.97ATP synthase subunit a 3 OS=Pelobacter propionicus... [more]
ATP6_PROMO3.347e-1132.77ATP synthase subunit a, sodium ion specific OS=Pro... [more]
ATP62_METCA3.347e-1130.77ATP synthase subunit a 2 OS=Methylococcus capsulat... [more]
ATP6_GEOMG4.371e-1132.79ATP synthase subunit a OS=Geobacter metallireducen... [more]
ATP6_GEOSL5.709e-1132.79ATP synthase subunit a OS=Geobacter sulfurreducens... [more]
ATP6_ARCB47.457e-1134.68ATP synthase subunit a OS=Arcobacter butzleri (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702512 ID=EY702512; Name=EY702512; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGG
GAGTTAGCCGCACCCACGAATGATATAAATACTACCGGTGCTTTAGCTTT
GCTCACGTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAG
GCTATTTCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAAC
ATTTTAGAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGG
GAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTAC
CTTTAGTGGGTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGT
ATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATC
TATGGAGGGACATCATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCT
TAGAACAAAGGCAATGGATGCGTAACTCAAGATAATCTACTTATACTTCT
ACTTAGGAAAAATACATATCCAAACATAAATCTACAAATACCGCATATAC
GATCAAGAGTCGTAGAAAAAAATTACGATATTGGGGGACTGTANGGAAGA
GATCTAAAGGGATCTTTTTCCTCAAATCCCTCTTTGGCCCTATATATCAT
CCCCCCCTCTCCCCGCCAATAAAATTGTCCTAATATGGGTTGGGCCATTC
TGGGGCATTCAATTCCAATAGGCAAATACCAGAGGGAGTAGGTGGATAAA
AATCCCTATAGTATCCCAGGGGGGGGGATTAACAAAAAGGAAAAAAGGTG
GTTTATAAAAAAATCCCCCTTTAGTGGATTTAGGCCATTCCTCATTCTAC
CGTGGGCCAAAGGGAAATTTATTATATAATGGGTTGGGCGGACCTCAAT
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