EY702512

Overview
NameEY702512
Unique NameEY702512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ARAHI (ATP synthase subunit a, chloroplastic OS=Arabis hirsuta GN=atpI PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.827e-56
Identity = 113/135 (83.70%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LP GELAAPTNDINTT ALALLTS AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  115 ALLPWKIIQLPQGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 249
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_TOBAC (ATP synthase subunit a, chloroplastic OS=Nicotiana tabacum GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMLLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_SOLTU (ATP synthase subunit a, chloroplastic OS=Solanum tuberosum GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMLLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_SOLBU (ATP synthase subunit a, chloroplastic OS=Solanum bulbocastanum GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMLLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PEA (ATP synthase subunit a, chloroplastic OS=Pisum sativum GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAG+SKKGL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIKLPHGELAAPTNDINTTVALALLTSVAYFYAGISKKGLAYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_NICTO (ATP synthase subunit a, chloroplastic OS=Nicotiana tomentosiformis GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMLLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_NICSY (ATP synthase subunit a, chloroplastic OS=Nicotiana sylvestris GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMLLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_HELAN (ATP synthase subunit a, chloroplastic OS=Helianthus annuus GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_GUIAB (ATP synthase subunit a, chloroplastic OS=Guizotia abyssinica GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFG ILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGKILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CICAR (ATP synthase subunit a, chloroplastic OS=Cicer arietinum GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAG+SKKGL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIKLPHGELAAPTNDINTTVALALLTSVAYFYAGISKKGLAYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVIPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
The following BLAST results are available for this feature:
BLAST of EY702512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
ATPI_ARAHI5.827e-5683.70ATP synthase subunit a, chloroplastic OS=Arabis hi... [more]
ATPI_TOBAC7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Nicotiana... [more]
ATPI_SOLTU7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Solanum t... [more]
ATPI_SOLBU7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Solanum b... [more]
ATPI_PEA7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Pisum sat... [more]
ATPI_NICTO7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Nicotiana... [more]
ATPI_NICSY7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Nicotiana... [more]
ATPI_HELAN7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Helianthu... [more]
ATPI_GUIAB7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Guizotia ... [more]
ATPI_CICAR7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Cicer ari... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702512 ID=EY702512; Name=EY702512; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGG
GAGTTAGCCGCACCCACGAATGATATAAATACTACCGGTGCTTTAGCTTT
GCTCACGTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAG
GCTATTTCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAAC
ATTTTAGAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGG
GAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTAC
CTTTAGTGGGTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGT
ATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATC
TATGGAGGGACATCATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCT
TAGAACAAAGGCAATGGATGCGTAACTCAAGATAATCTACTTATACTTCT
ACTTAGGAAAAATACATATCCAAACATAAATCTACAAATACCGCATATAC
GATCAAGAGTCGTAGAAAAAAATTACGATATTGGGGGACTGTANGGAAGA
GATCTAAAGGGATCTTTTTCCTCAAATCCCTCTTTGGCCCTATATATCAT
CCCCCCCTCTCCCCGCCAATAAAATTGTCCTAATATGGGTTGGGCCATTC
TGGGGCATTCAATTCCAATAGGCAAATACCAGAGGGAGTAGGTGGATAAA
AATCCCTATAGTATCCCAGGGGGGGGGATTAACAAAAAGGAAAAAAGGTG
GTTTATAAAAAAATCCCCCTTTAGTGGATTTAGGCCATTCCTCATTCTAC
CGTGGGCCAAAGGGAAATTTATTATATAATGGGTTGGGCGGACCTCAAT
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