EY702512

Overview
NameEY702512
Unique NameEY702512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ATRBE (ATP synthase subunit a, chloroplastic OS=Atropa belladonna GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMLLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ACOCL (ATP synthase subunit a, chloroplastic OS=Acorus calamus GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWK+IELPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKLIELPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ACOAM (ATP synthase subunit a, chloroplastic OS=Acorus americanus GN=atpI PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWK+IELPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKLIELPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_RANMC (ATP synthase subunit a, chloroplastic OS=Ranunculus macranthus GN=atpI PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.939e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PLAOC (ATP synthase subunit a, chloroplastic OS=Platanus occidentalis GN=atpI PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.939e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PHAVU (ATP synthase subunit a, chloroplastic OS=Phaseolus vulgaris GN=atpI PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.939e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL PWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGLSKKGL YFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGES+EGHH
Sbjct:  113 ALFPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLAYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESIEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_NANDO (ATP synthase subunit a, chloroplastic OS=Nandina domestica GN=atpI PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.939e-56
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CYCTA (ATP synthase subunit a, chloroplastic OS=Cycas taitungensis GN=atpI PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.939e-56
Identity = 110/135 (81.48%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTP+LLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTS IQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLAKKGLGYFGKYIQPTPVLLPINILEDFTKPLSLSFRLFGNILADELVVAVLVSLVPLVVPIPVMFLGLFTSAIQALIFATLAAAYIGESMEGHH 248
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_WHEAT (ATP synthase subunit a, chloroplastic OS=Triticum aestivum GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 112/135 (82.96%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVIPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_SORBI (ATP synthase subunit a, chloroplastic OS=Sorghum bicolor GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 112/135 (82.96%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
The following BLAST results are available for this feature:
BLAST of EY702512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
ATPI_ATRBE7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Atropa be... [more]
ATPI_ACOCL7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Acorus ca... [more]
ATPI_ACOAM7.610e-5682.22ATP synthase subunit a, chloroplastic OS=Acorus am... [more]
ATPI_RANMC9.939e-5682.22ATP synthase subunit a, chloroplastic OS=Ranunculu... [more]
ATPI_PLAOC9.939e-5682.22ATP synthase subunit a, chloroplastic OS=Platanus ... [more]
ATPI_PHAVU9.939e-5682.22ATP synthase subunit a, chloroplastic OS=Phaseolus... [more]
ATPI_NANDO9.939e-5682.22ATP synthase subunit a, chloroplastic OS=Nandina d... [more]
ATPI_CYCTA9.939e-5681.48ATP synthase subunit a, chloroplastic OS=Cycas tai... [more]
ATPI_WHEAT1.298e-5582.96ATP synthase subunit a, chloroplastic OS=Triticum ... [more]
ATPI_SORBI1.298e-5582.96ATP synthase subunit a, chloroplastic OS=Sorghum b... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702512 ID=EY702512; Name=EY702512; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGG
GAGTTAGCCGCACCCACGAATGATATAAATACTACCGGTGCTTTAGCTTT
GCTCACGTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAG
GCTATTTCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAAC
ATTTTAGAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGG
GAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTAC
CTTTAGTGGGTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGT
ATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATC
TATGGAGGGACATCATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCT
TAGAACAAAGGCAATGGATGCGTAACTCAAGATAATCTACTTATACTTCT
ACTTAGGAAAAATACATATCCAAACATAAATCTACAAATACCGCATATAC
GATCAAGAGTCGTAGAAAAAAATTACGATATTGGGGGACTGTANGGAAGA
GATCTAAAGGGATCTTTTTCCTCAAATCCCTCTTTGGCCCTATATATCAT
CCCCCCCTCTCCCCGCCAATAAAATTGTCCTAATATGGGTTGGGCCATTC
TGGGGCATTCAATTCCAATAGGCAAATACCAGAGGGAGTAGGTGGATAAA
AATCCCTATAGTATCCCAGGGGGGGGGATTAACAAAAAGGAAAAAAGGTG
GTTTATAAAAAAATCCCCCTTTAGTGGATTTAGGCCATTCCTCATTCTAC
CGTGGGCCAAAGGGAAATTTATTATATAATGGGTTGGGCGGACCTCAAT
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