EY702512

Overview
NameEY702512
Unique NameEY702512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_SACOF (ATP synthase subunit a, chloroplastic OS=Saccharum officinarum GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 112/135 (82.96%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_SACHY (ATP synthase subunit a, chloroplastic OS=Saccharum hybrid GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 112/135 (82.96%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PIPCE (ATP synthase subunit a, chloroplastic OS=Piper cenocladum GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 110/135 (81.48%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL PWKII+LPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYFSKYIQPTPILLPIN+LEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALFPWKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFSKYIQPTPILLPINVLEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_MAIZE (ATP synthase subunit a, chloroplastic OS=Zea mays GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 112/135 (82.96%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_LOLPR (ATP synthase subunit a, chloroplastic OS=Lolium perenne GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 112/135 (82.96%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_HORVU (ATP synthase subunit a, chloroplastic OS=Hordeum vulgare GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 112/135 (82.96%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVIPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_DIOEL (ATP synthase subunit a, chloroplastic OS=Dioscorea elephantipes GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFRKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSLVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_COFAR (ATP synthase subunit a, chloroplastic OS=Coffea arabica GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 110/135 (81.48%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAG++KKGL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  110 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGITKKGLSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 244
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_BRADI (ATP synthase subunit a, chloroplastic OS=Brachypodium distachyon GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 112/135 (82.96%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_AGRST (ATP synthase subunit a, chloroplastic OS=Agrostis stolonifera GN=atpI PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55
Identity = 112/135 (82.96%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
The following BLAST results are available for this feature:
BLAST of EY702512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
ATPI_SACOF1.298e-5582.96ATP synthase subunit a, chloroplastic OS=Saccharum... [more]
ATPI_SACHY1.298e-5582.96ATP synthase subunit a, chloroplastic OS=Saccharum... [more]
ATPI_PIPCE1.298e-5581.48ATP synthase subunit a, chloroplastic OS=Piper cen... [more]
ATPI_MAIZE1.298e-5582.96ATP synthase subunit a, chloroplastic OS=Zea mays ... [more]
ATPI_LOLPR1.298e-5582.96ATP synthase subunit a, chloroplastic OS=Lolium pe... [more]
ATPI_HORVU1.298e-5582.96ATP synthase subunit a, chloroplastic OS=Hordeum v... [more]
ATPI_DIOEL1.298e-5582.22ATP synthase subunit a, chloroplastic OS=Dioscorea... [more]
ATPI_COFAR1.298e-5581.48ATP synthase subunit a, chloroplastic OS=Coffea ar... [more]
ATPI_BRADI1.298e-5582.96ATP synthase subunit a, chloroplastic OS=Brachypod... [more]
ATPI_AGRST1.298e-5582.96ATP synthase subunit a, chloroplastic OS=Agrostis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702512 ID=EY702512; Name=EY702512; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGG
GAGTTAGCCGCACCCACGAATGATATAAATACTACCGGTGCTTTAGCTTT
GCTCACGTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAG
GCTATTTCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAAC
ATTTTAGAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGG
GAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTAC
CTTTAGTGGGTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGT
ATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATC
TATGGAGGGACATCATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCT
TAGAACAAAGGCAATGGATGCGTAACTCAAGATAATCTACTTATACTTCT
ACTTAGGAAAAATACATATCCAAACATAAATCTACAAATACCGCATATAC
GATCAAGAGTCGTAGAAAAAAATTACGATATTGGGGGACTGTANGGAAGA
GATCTAAAGGGATCTTTTTCCTCAAATCCCTCTTTGGCCCTATATATCAT
CCCCCCCTCTCCCCGCCAATAAAATTGTCCTAATATGGGTTGGGCCATTC
TGGGGCATTCAATTCCAATAGGCAAATACCAGAGGGAGTAGGTGGATAAA
AATCCCTATAGTATCCCAGGGGGGGGGATTAACAAAAAGGAAAAAAGGTG
GTTTATAAAAAAATCCCCCTTTAGTGGATTTAGGCCATTCCTCATTCTAC
CGTGGGCCAAAGGGAAATTTATTATATAATGGGTTGGGCGGACCTCAAT
back to top