EY702512

Overview
NameEY702512
Unique NameEY702512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_SOLLC (ATP synthase subunit a, chloroplastic OS=Solanum lycopersicum GN=atpI PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.695e-55
Identity = 110/135 (81.48%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+K+GLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKRGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMLLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_JASNU (ATP synthase subunit a, chloroplastic OS=Jasminum nudiflorum GN=atpI PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.695e-55
Identity = 110/135 (81.48%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+K+GL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKRGLSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PHAAO (ATP synthase subunit a, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=atpI PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.214e-55
Identity = 111/135 (82.22%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALAL TS+AYFYAGL KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIKLPHGELAAPTNDINTTVALALPTSVAYFYAGLRKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ORYSJ (ATP synthase subunit a, chloroplastic OS=Oryza sativa subsp. japonica GN=atpI PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.892e-55
Identity = 111/135 (82.22%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ORYSI (ATP synthase subunit a, chloroplastic OS=Oryza sativa subsp. indica GN=atpI PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.892e-55
Identity = 111/135 (82.22%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ORYSA (ATP synthase subunit a, chloroplastic OS=Oryza sativa GN=atpI PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.892e-55
Identity = 111/135 (82.22%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS AYFYAGLSKKGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_NYMAL (ATP synthase subunit a, chloroplastic OS=Nymphaea alba GN=atpI PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.892e-55
Identity = 109/135 (80.74%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPW+II+LPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPIN+LEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALLPWRIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINVLEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVIPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 248
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ILLOL (ATP synthase subunit a, chloroplastic OS=Illicium oligandrum GN=atpI PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.932e-55
Identity = 110/135 (81.48%), Postives = 113/135 (83.70%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTS IQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSSIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CALFG (ATP synthase subunit a, chloroplastic OS=Calycanthus floridus var. glaucus GN=atpI PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.442e-55
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLP KII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPRKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ORYNI (ATP synthase subunit a, chloroplastic OS=Oryza nivara GN=atpI PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.099e-54
Identity = 110/135 (81.48%), Postives = 112/135 (82.96%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS AYFYAGLS KGL YF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAYFYAGLSNKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
The following BLAST results are available for this feature:
BLAST of EY702512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
ATPI_SOLLC1.695e-5581.48ATP synthase subunit a, chloroplastic OS=Solanum l... [more]
ATPI_JASNU1.695e-5581.48ATP synthase subunit a, chloroplastic OS=Jasminum ... [more]
ATPI_PHAAO2.214e-5582.22ATP synthase subunit a, chloroplastic OS=Phalaenop... [more]
ATPI_ORYSJ2.892e-5582.22ATP synthase subunit a, chloroplastic OS=Oryza sat... [more]
ATPI_ORYSI2.892e-5582.22ATP synthase subunit a, chloroplastic OS=Oryza sat... [more]
ATPI_ORYSA2.892e-5582.22ATP synthase subunit a, chloroplastic OS=Oryza sat... [more]
ATPI_NYMAL2.892e-5580.74ATP synthase subunit a, chloroplastic OS=Nymphaea ... [more]
ATPI_ILLOL4.932e-5581.48ATP synthase subunit a, chloroplastic OS=Illicium ... [more]
ATPI_CALFG6.442e-5582.22ATP synthase subunit a, chloroplastic OS=Calycanth... [more]
ATPI_ORYNI1.099e-5481.48ATP synthase subunit a, chloroplastic OS=Oryza niv... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702512 ID=EY702512; Name=EY702512; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGG
GAGTTAGCCGCACCCACGAATGATATAAATACTACCGGTGCTTTAGCTTT
GCTCACGTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAG
GCTATTTCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAAC
ATTTTAGAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGG
GAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTAC
CTTTAGTGGGTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGT
ATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATC
TATGGAGGGACATCATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCT
TAGAACAAAGGCAATGGATGCGTAACTCAAGATAATCTACTTATACTTCT
ACTTAGGAAAAATACATATCCAAACATAAATCTACAAATACCGCATATAC
GATCAAGAGTCGTAGAAAAAAATTACGATATTGGGGGACTGTANGGAAGA
GATCTAAAGGGATCTTTTTCCTCAAATCCCTCTTTGGCCCTATATATCAT
CCCCCCCTCTCCCCGCCAATAAAATTGTCCTAATATGGGTTGGGCCATTC
TGGGGCATTCAATTCCAATAGGCAAATACCAGAGGGAGTAGGTGGATAAA
AATCCCTATAGTATCCCAGGGGGGGGGATTAACAAAAAGGAAAAAAGGTG
GTTTATAAAAAAATCCCCCTTTAGTGGATTTAGGCCATTCCTCATTCTAC
CGTGGGCCAAAGGGAAATTTATTATATAATGGGTTGGGCGGACCTCAAT
back to top