EY702512

Overview
NameEY702512
Unique NameEY702512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CUSRE (ATP synthase subunit a, plastid OS=Cuscuta reflexa GN=atpI PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.099e-54
Identity = 109/134 (81.34%), Postives = 114/134 (85.07%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGH 413
            ALLPWKI++LPHGELAAPTNDINTT ALALLTS AYFYAG+SKKGLGYFSKYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIF+TLAAAYIGESMEGH
Sbjct:  113 ALLPWKILQLPHGELAAPTNDINTTVALALLTSAAYFYAGISKKGLGYFSKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFSTLAAAYIGESMEGH 246          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PELHO (ATP synthase subunit a, chloroplastic OS=Pelargonium hortorum GN=atpI PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.435e-54
Identity = 109/135 (80.74%), Postives = 113/135 (83.70%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL PWKII+LP GELAAPTNDINTT ALALLTS+AYFYAGL+KKGL YF+KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALFPWKIIQLPQGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLAYFNKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLLSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PINTH (ATP synthase subunit a, chloroplastic OS=Pinus thunbergii GN=atpI PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.874e-54
Identity = 109/135 (80.74%), Postives = 113/135 (83.70%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPW I++LP GELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALLPWGILKLPQGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVAVLVSLVPLIVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PINKO (ATP synthase subunit a, chloroplastic OS=Pinus koraiensis GN=atpI PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.874e-54
Identity = 109/135 (80.74%), Postives = 113/135 (83.70%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPW I++LP GELAAPTNDINTT ALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALLPWGILKLPQGELAAPTNDINTTVALALLTSVAYFYAGLAKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVAVLVSPVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CRYJA (ATP synthase subunit a, chloroplastic OS=Cryptomeria japonica GN=atpI PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.448e-54
Identity = 108/135 (80.00%), Postives = 112/135 (82.96%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL PW II+LPHGELAAPTNDINTT ALALLTS+AYFYAG +K+GLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALFPWGIIKLPHGELAAPTNDINTTVALALLTSVAYFYAGFTKRGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVAVLVSLVPIVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PHYPA (ATP synthase subunit a, chloroplastic OS=Physcomitrella patens GN=atpI PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.176e-54
Identity = 106/135 (78.52%), Postives = 112/135 (82.96%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPW+++ELPHGELAAPTNDINTT ALALLTS+AYFYAGL K+GL YF KYIQPTP+LLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTS IQALIFATLAAAYIGESMEGHH
Sbjct:  115 ALLPWRVLELPHGELAAPTNDINTTVALALLTSVAYFYAGLHKRGLNYFGKYIQPTPVLLPINILEDFTKPLSLSFRLFGNILADELVVAVLISLVPLVVPIPMMFLGLFTSAIQALIFATLAAAYIGESMEGHH 249          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CHLSC (ATP synthase subunit a, chloroplastic OS=Chloranthus spicatus GN=atpI PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.176e-54
Identity = 110/135 (81.48%), Postives = 113/135 (83.70%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLP KII+LPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPRKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CHAGL (ATP synthase subunit a, chloroplastic OS=Chaetosphaeridium globosum GN=atpI PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.176e-54
Identity = 106/135 (78.52%), Postives = 113/135 (83.70%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL+PWK+IELP+GELAAPTNDINTT ALALLTS+AYFYAGL+KKGL YF KYIQPTP+LLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLA AYIGES+EGHH
Sbjct:  109 ALIPWKVIELPNGELAAPTNDINTTVALALLTSVAYFYAGLNKKGLSYFGKYIQPTPVLLPINILEDFTKPLSLSFRLFGNILADELVVAVLVSLVPLVIPVPMMFLGLFTSGIQALIFATLAGAYIGESLEGHH 243          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_DRIGR (ATP synthase subunit a, chloroplastic OS=Drimys granadensis GN=atpI PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.453e-54
Identity = 109/135 (80.74%), Postives = 113/135 (83.70%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLP KI++LPHGELAAPTNDINTT ALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPRKIVQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_PSINU (ATP synthase subunit a, chloroplastic OS=Psilotum nudum GN=atpI PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.215e-53
Identity = 107/135 (79.26%), Postives = 111/135 (82.22%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL PWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGL KKGL YF +YI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTS IQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALFPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLHKKGLSYFGRYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVAVLISLVPLVVPIPMMFLGLFTSAIQALIFATLAAAYIGESMEGHH 248          
The following BLAST results are available for this feature:
BLAST of EY702512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
ATPI_CUSRE1.099e-5481.34ATP synthase subunit a, plastid OS=Cuscuta reflexa... [more]
ATPI_PELHO1.435e-5480.74ATP synthase subunit a, chloroplastic OS=Pelargoni... [more]
ATPI_PINTH1.874e-5480.74ATP synthase subunit a, chloroplastic OS=Pinus thu... [more]
ATPI_PINKO1.874e-5480.74ATP synthase subunit a, chloroplastic OS=Pinus kor... [more]
ATPI_CRYJA2.448e-5480.00ATP synthase subunit a, chloroplastic OS=Cryptomer... [more]
ATPI_PHYPA4.176e-5478.52ATP synthase subunit a, chloroplastic OS=Physcomit... [more]
ATPI_CHLSC4.176e-5481.48ATP synthase subunit a, chloroplastic OS=Chloranth... [more]
ATPI_CHAGL4.176e-5478.52ATP synthase subunit a, chloroplastic OS=Chaetosph... [more]
ATPI_DRIGR5.453e-5480.74ATP synthase subunit a, chloroplastic OS=Drimys gr... [more]
ATPI_PSINU1.215e-5379.26ATP synthase subunit a, chloroplastic OS=Psilotum ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702512 ID=EY702512; Name=EY702512; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGG
GAGTTAGCCGCACCCACGAATGATATAAATACTACCGGTGCTTTAGCTTT
GCTCACGTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAG
GCTATTTCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAAC
ATTTTAGAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGG
GAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTAC
CTTTAGTGGGTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGT
ATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATC
TATGGAGGGACATCATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCT
TAGAACAAAGGCAATGGATGCGTAACTCAAGATAATCTACTTATACTTCT
ACTTAGGAAAAATACATATCCAAACATAAATCTACAAATACCGCATATAC
GATCAAGAGTCGTAGAAAAAAATTACGATATTGGGGGACTGTANGGAAGA
GATCTAAAGGGATCTTTTTCCTCAAATCCCTCTTTGGCCCTATATATCAT
CCCCCCCTCTCCCCGCCAATAAAATTGTCCTAATATGGGTTGGGCCATTC
TGGGGCATTCAATTCCAATAGGCAAATACCAGAGGGAGTAGGTGGATAAA
AATCCCTATAGTATCCCAGGGGGGGGGATTAACAAAAAGGAAAAAAGGTG
GTTTATAAAAAAATCCCCCTTTAGTGGATTTAGGCCATTCCTCATTCTAC
CGTGGGCCAAAGGGAAATTTATTATATAATGGGTTGGGCGGACCTCAAT
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