EY702512

Overview
NameEY702512
Unique NameEY702512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CHLAT (ATP synthase subunit a, chloroplastic OS=Chlorokybus atmophyticus GN=atpI PE=3 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.215e-53
Identity = 107/135 (79.26%), Postives = 112/135 (82.96%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL+PW++IELP GELAAPTNDINTT ALALLTS+AYFYAGLSKKGL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGES+EGHH
Sbjct:  115 ALIPWRLIELPSGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVAVLISLVPLVIPVPMMLLGLFTSGIQALIFATLAAAYIGESLEGHH 249          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ANGEV (ATP synthase subunit a, chloroplastic OS=Angiopteris evecta GN=atpI PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.215e-53
Identity = 106/135 (78.52%), Postives = 111/135 (82.22%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL PW+II+LPHGELAAPTNDINTT ALALLTS+AYFYAGL K+GL YF KYIQPTP+LLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTS IQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALFPWRIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLHKRGLSYFGKYIQPTPVLLPINILEDFTKPLSLSFRLFGNILADELVVAVLISLVPLVVPIPMMFLGLFTSAIQALIFATLAAAYIGESMEGHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_AMBTC (ATP synthase subunit a, chloroplastic OS=Amborella trichopoda GN=atpI PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.215e-53
Identity = 110/135 (81.48%), Postives = 112/135 (82.96%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLP KIIELP GELAAPTNDINTT ALAL TS+AYFYAG+SKKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALLPRKIIELPQGELAAPTNDINTTVALALPTSVAYFYAGISKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSLVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ADICA (ATP synthase subunit a, chloroplastic OS=Adiantum capillus-veneris GN=atpI PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.587e-53
Identity = 106/135 (78.52%), Postives = 111/135 (82.22%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPW++I+LPHGELAAPTNDINTT ALALLTS+AYFYAGL K+G  YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALLPWRVIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLYKRGFSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVAVLVSLVPLIVPVPMMLLGLFTSGIQALIFATLAAAYIGESMEGHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_STAPU (ATP synthase subunit a, chloroplastic OS=Staurastrum punctulatum GN=atpI PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.072e-53
Identity = 106/135 (78.52%), Postives = 111/135 (82.22%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL+PWK+IELPHGELAAPTNDINTT ALALLTS AYFYAG  K+GL YF KY+QPTP+LLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALVPWKLIELPHGELAAPTNDINTTVALALLTSGAYFYAGFHKRGLSYFGKYLQPTPVLLPINILEDFTKPLSLSFRLFGNILADELVVAVLVSLVPLVVPIPMMFLGLFTSGIQALIFATLAAAYIGESMEGHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CUSEX (ATP synthase subunit a, plastid OS=Cuscuta exaltata GN=atpI PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.535e-53
Identity = 107/134 (79.85%), Postives = 111/134 (82.84%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGH 413
            ALLPWKI++LPHGELAAPTNDINTT ALALLTS AYFYAG+ KKGLGYF KYI+PTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGESMEGH
Sbjct:  113 ALLPWKILQLPHGELAAPTNDINTTVALALLTSAAYFYAGILKKGLGYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMLLGLFTSGIQALIFATLAAAYIGESMEGH 246          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_MARPO (ATP synthase subunit a, chloroplastic OS=Marchantia polymorpha GN=atpI PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.030e-53
Identity = 105/135 (77.78%), Postives = 110/135 (81.48%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL PW++ ELP+GELAAPTNDINTT ALALLTS+AYFYAGL KKGL YF KYIQPTP+LLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTS IQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALFPWRVFELPNGELAAPTNDINTTVALALLTSVAYFYAGLHKKGLSYFGKYIQPTPVLLPINILEDFTKPLSLSFRLFGNILADELVVAVLISLVPLVVPIPMMFLGLFTSAIQALIFATLAAAYIGESMEGHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_LIRTU (ATP synthase subunit a, chloroplastic OS=Liriodendron tulipifera GN=atpI PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.028e-52
Identity = 108/135 (80.00%), Postives = 111/135 (82.22%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLP KII+LPHGELAAPTNDINTT ALAL TS+AYFYAG +KKGL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPRKIIQLPHGELAAPTNDINTTVALALPTSMAYFYAGFTKKGLSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_WELMI (ATP synthase subunit a, chloroplastic OS=Welwitschia mirabilis GN=atpI PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.908e-52
Identity = 103/135 (76.30%), Postives = 111/135 (82.22%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            AL+PW +++LPHGELAAPTNDINTT ALALLTS+AYFYAGL+KKGL +F KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  M LGLFTSGIQALIFATLAAAYIGES+E HH
Sbjct:  114 ALVPWGVVKLPHGELAAPTNDINTTVALALLTSVAYFYAGLAKKGLSFFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVAVLVSLVPLVVPIPVMLLGLFTSGIQALIFATLAAAYIGESLENHH 248          
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_ANTFO (ATP synthase subunit a, chloroplastic OS=Anthoceros formosae GN=atpI PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.908e-52
Identity = 106/135 (78.52%), Postives = 108/135 (80.00%), Query Frame = 3
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPW+I ELPHGELAAPTNDINTT ALAL TS+AYFYAGL KKGL Y  KYIQPTPILLPINILEDFTKPL LSFRLFGNILADE                  MFLGLFTS IQALIFATLAAAYIGESMEGHH
Sbjct:  114 ALLPWRIFELPHGELAAPTNDINTTVALALPTSVAYFYAGLRKKGLSYSGKYIQPTPILLPINILEDFTKPLPLSFRLFGNILADELVVAVPISLVPLVVPIPMMFLGLFTSAIQALIFATLAAAYIGESMEGHH 248          
The following BLAST results are available for this feature:
BLAST of EY702512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
ATPI_CHLAT1.215e-5379.26ATP synthase subunit a, chloroplastic OS=Chlorokyb... [more]
ATPI_ANGEV1.215e-5378.52ATP synthase subunit a, chloroplastic OS=Angiopter... [more]
ATPI_AMBTC1.215e-5381.48ATP synthase subunit a, chloroplastic OS=Amborella... [more]
ATPI_ADICA1.587e-5378.52ATP synthase subunit a, chloroplastic OS=Adiantum ... [more]
ATPI_STAPU2.072e-5378.52ATP synthase subunit a, chloroplastic OS=Staurastr... [more]
ATPI_CUSEX3.535e-5379.85ATP synthase subunit a, plastid OS=Cuscuta exaltat... [more]
ATPI_MARPO6.030e-5377.78ATP synthase subunit a, chloroplastic OS=Marchanti... [more]
ATPI_LIRTU1.028e-5280.00ATP synthase subunit a, chloroplastic OS=Liriodend... [more]
ATPI_WELMI3.908e-5276.30ATP synthase subunit a, chloroplastic OS=Welwitsch... [more]
ATPI_ANTFO3.908e-5278.52ATP synthase subunit a, chloroplastic OS=Anthocero... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702512 ID=EY702512; Name=EY702512; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGG
GAGTTAGCCGCACCCACGAATGATATAAATACTACCGGTGCTTTAGCTTT
GCTCACGTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAG
GCTATTTCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAAC
ATTTTAGAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGG
GAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTAC
CTTTAGTGGGTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGT
ATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATC
TATGGAGGGACATCATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCT
TAGAACAAAGGCAATGGATGCGTAACTCAAGATAATCTACTTATACTTCT
ACTTAGGAAAAATACATATCCAAACATAAATCTACAAATACCGCATATAC
GATCAAGAGTCGTAGAAAAAAATTACGATATTGGGGGACTGTANGGAAGA
GATCTAAAGGGATCTTTTTCCTCAAATCCCTCTTTGGCCCTATATATCAT
CCCCCCCTCTCCCCGCCAATAAAATTGTCCTAATATGGGTTGGGCCATTC
TGGGGCATTCAATTCCAATAGGCAAATACCAGAGGGAGTAGGTGGATAAA
AATCCCTATAGTATCCCAGGGGGGGGGATTAACAAAAAGGAAAAAAGGTG
GTTTATAAAAAAATCCCCCTTTAGTGGATTTAGGCCATTCCTCATTCTAC
CGTGGGCCAAAGGGAAATTTATTATATAATGGGTTGGGCGGACCTCAAT
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