DY257492

Overview
NameDY257492
Unique NameDY257492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257492 vs. ExPASy Swiss-Prot
Match: CANB2_DICDI (Calcineurin subunit B type 2 OS=Dictyostelium discoideum GN=cnbB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12
Identity = 38/107 (35.51%), Postives = 66/107 (61.68%), Query Frame = 2
Query:    2 LKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNM 322
            + R+G + F +FV+SL  FHP A   DKI   F++YD+   GFI R+E+ E +L ++  S+  L+ + I +IV+++ ++AD NG GK+D  ++   +  +    +NM
Sbjct:   71 VNRDGQVNFKQFVKSLSTFHPKADKADKIKILFKVYDINNDGFITRDEI-ETILTMMVGSN--LTKEQISSIVEETLNEADVNGKGKLDYPDFYNSIGSSGCNAENM 174          
BLAST of DY257492 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12
Identity = 40/105 (38.10%), Postives = 66/105 (62.86%), Query Frame = 2
Query:   14 GVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 328
            G ++F EF+ SL VF  H   E+K+ FAF++YD+ + G+I   EL  +VL ++  ++  L +D ++ IVDK+  + D + DGKI  EE+K+ V    ++  +MTL
Sbjct:   71 GDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGEL-YLVLKMMVGTN--LREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIV-SGSNVTSSMTL 171          
BLAST of DY257492 vs. ExPASy Swiss-Prot
Match: CANB_YEAST (Calcineurin subunit B OS=Saccharomyces cerevisiae GN=CNB1 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11
Identity = 36/108 (33.33%), Postives = 68/108 (62.96%), Query Frame = 2
Query:   11 NGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTLPY 334
            +G ++F EF+  L +F      ++K+ FAF++YD+ + GFI   EL  +VL ++  S+  L D+ ++ IVD++  + D++GDG++  EE+K  + +   + K++TL Y
Sbjct:   70 SGDVDFQEFITGLSIFSGRGSKDEKLRFAFKIYDIDKDGFISNGEL-FIVLKIMVGSN--LDDEQLQQIVDRTIVENDSDGDGRLSFEEFKNAI-ETTEVAKSLTLQY 173          
BLAST of DY257492 vs. ExPASy Swiss-Prot
Match: CANB_CRYNE (Calcineurin subunit B OS=Cryptococcus neoformans GN=CNB1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 36/106 (33.96%), Postives = 63/106 (59.43%), Query Frame = 2
Query:   11 NGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 328
            +G ++F EFV  L  F      ++K+ FAF++YD+ + G+I   EL  ++  ++  +   L D  ++ IVDK+  +AD +GDGK+  EE+ + V  +  ++K MTL
Sbjct:   70 SGTVDFQEFVGGLSAFSSKGGRDEKLRFAFKVYDMDRDGYISNGELYLVLKQMVGNN---LKDQQLQQIVDKTIMEADKDGDGKLSFEEFTQMV-ASTDIVKQMTL 171          
The following BLAST results are available for this feature:
BLAST of DY257492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CANB2_DICDI1.806e-1235.51Calcineurin subunit B type 2 OS=Dictyostelium disc... [more]
CANB_SCHPO8.964e-1238.10Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]
CANB_YEAST7.589e-1133.33Calcineurin subunit B OS=Saccharomyces cerevisiae ... [more]
CANB_CRYNE9.911e-1133.96Calcineurin subunit B OS=Cryptococcus neoformans G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2DD04FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257492 ID=DY257492; Name=DY257492; organism=Citrus sinensis; type=EST; length=773bp
CTTGAAACGCAATGGGGTTATCGAGTTTGGGGAATTTGTTCGATCATTGG
GTGTCTTCCATCCACATGCACTTGTGGAGGACAAAATTGCTTTTGCTTTC
AGATTGTATGATTTAAGACAAACTGGGTTTATTGAGCGGGAGGAGTTAAA
GGAGATGGTTTTGGCACTTCTGCATGAATCGGATCTTATACTTTCAGATG
ATGTGATCGAAACTATTGTGGATAAGAGCTTCAGTGATGCTGATACAAAT
GGTGATGGAAAAATTGACCCAGAAGAGTGGAAAGAGTTTGTGAAGAAGAA
TCCATCTCTGATAAAGAACATGACTCTTCCATATTTAAAGGATATAACCT
TGGCATTTCCCAGCTTTGTTTTAAGTTCTGAAGTTGAAGACTCAGAAATG
TAGGCTCATAACAAATCTACCGGGCATCAACCTCCTTGCTCCTTGGTGGC
ATTATCAATGACATTGCTACAGGAGACCTTTGGCTTTCAACTTTGCTTGA
TTTTTTATACAGGGGCAACAGAAAATCCAGCTTAGAACTCAAGTTTACGG
CGCCCTCAAGCATAACCAACTGGCAAGATGTGTTTGCCCAGCTGCCCTGT
TTAGCAACCTTTATTCGTTCTTATAACGTGTGGCCGGTACAAATCAAATG
CACATATAGGATTTGTTTAGGTTAATCTGGTCATAGCATGAGAAATTTCC
TTTTTGATAAGGTACCAAGAAGAGGTATATTTGTAGTTCAATCCTTGTTT
GTTTAATAAATGGATTTTTTTTT
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