EY702494

Overview
NameEY702494
Unique NameEY702494
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE9_RAT (Copine-9 OS=Rattus norvegicus GN=Cpne9 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 2
Query:  233 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP-----DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVE--HSGGQYHVLVIIADGQVTXSVDTEHGAISS 673
            N  V IDFT SN        Q  SLH++   Q + Y  A+  +G+ +  +D D L P +GFG     +  +   +P     ++  C G E VL  Y + +  ++L GPT FAP+I            G QY+VL+II DG ++    T+   +S+
Sbjct:  299 NFTVAIDFTASN----GNPLQPTSLHYMSPYQLSAYAMALKAVGEIIQDYDSDKLFPAYGFGAKLPPEGRISHQFPLNNNDEDPNCAGIEGVLESYFQSLRTVQLYGPTYFAPVINQVARAAAKISDGSQYYVLLIITDGVISDMTQTKEAIVSA 449          
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE9_MOUSE (Copine-9 OS=Mus musculus GN=Cpne9 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 2
Query:  233 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP-----DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVE--HSGGQYHVLVIIADGQVTXSVDTEHGAISS 673
            N  V IDFT SN        Q  SLH++   Q + Y  A+  +G+ +  +D D L P +GFG     +  +   +P     ++  C G E VL  Y + +  ++L GPT FAP+I            G QY+VL+II DG ++    T+   +S+
Sbjct:  299 NFTVAIDFTASN----GNPLQPTSLHYMSPYQLSAYAMALKAVGEIIQDYDSDKLFPAYGFGAKLPPEGRISHQFPLNNNDEDPNCAGIEGVLESYFQSLRTVQLYGPTYFAPVINQVARAAAKISDGSQYYVLLIITDGVISDMTQTKEAIVSA 449          
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE9_HUMAN (Copine-9 OS=Homo sapiens GN=CPNE9 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 2
Query:  233 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP-----DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVE--HSGGQYHVLVIIADGQVTXSVDTEHGAISS 673
            N  V IDFT SN        Q  SLH++   Q + Y  A+  +G+ +  +D D L P +GFG     +  +   +P     ++  C G E VL  Y + +  ++L GPT FAP+I            G QY+VL+II DG ++    T+   +S+
Sbjct:  299 NFTVAIDFTASN----GNPLQPTSLHYMSPYQLSAYAMALKAVGEIIQDYDSDKLFPAYGFGAKLPPEGRISHQFPLNNNDEDPNCAGIEGVLESYFQSLRTVQLYGPTYFAPVINQVARAAAKISDGSQYYVLLIITDGVISDMTQTKEAIVSA 449          
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE8_MOUSE (Copine-8 OS=Mus musculus GN=Cpne8 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 47/155 (30.32%), Postives = 73/155 (47.10%), Query Frame = 2
Query:  233 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFG-----DASTHDQEVFSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVE--HSGGQYHVLVIIADGQVTXSVDTEHGAISS 673
            N  V IDFT SN        Q  SLH++   Q N Y  A+  +G+ +  +D D + P  GFG     D     +   +  P   +C+G E V+  Y   +  ++L GPT+FAP+I            G QY VL+I+ DG ++    T+   +++
Sbjct:  309 NFTVAIDFTASN----GNPAQPTSLHYMNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDGVISDMAQTKESIVNA 459          
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE8_HUMAN (Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 47/155 (30.32%), Postives = 73/155 (47.10%), Query Frame = 2
Query:  233 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFG-----DASTHDQEVFSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVE--HSGGQYHVLVIIADGQVTXSVDTEHGAISS 673
            N  V IDFT SN        Q  SLH++   Q N Y  A+  +G+ +  +D D + P  GFG     D     +   +  P   +C+G E V+  Y   +  ++L GPT+FAP+I            G QY VL+I+ DG ++    T+   +++
Sbjct:  309 NFTVAIDFTASN----GNPAQPTSLHYMNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDGVISDMAQTKESIVNA 459          
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE7_MOUSE (Copine-7 OS=Mus musculus GN=Cpne7 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13
Identity = 52/153 (33.99%), Postives = 73/153 (47.71%), Query Frame = 2
Query:  242 VGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMA--ITIVEHSGG---QYHVLVIIADGQVTXSVDTEHGAI 667
            V IDFT SN           SLHHI   Q N Y +A+  +G+    +D D      GFG       EV      +F P++  C G + V+  Y+  +P ++L GPT+ APII     +   E S G   QY++L+I+ DG VT   DT    +
Sbjct:  309 VAIDFTASN----GDPRNSCSLHHINPYQPNEYLRALVAVGEVCQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPEDDECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTDGVVTDMSDTREAIV 457          
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE5_MOUSE (Copine-5 OS=Mus musculus GN=Cpne5 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13
Identity = 47/155 (30.32%), Postives = 73/155 (47.10%), Query Frame = 2
Query:  233 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP-----DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAI--TIVEHSGGQYHVLVIIADGQVTXSVDTEHGAISS 673
            N  V IDFT SN        Q  SLH++   Q N Y  A++ +G+ +  +D D + P  GFG     D  V   +P     +   C G + +L  Y   +  ++L GPT+FAP++            G QY VL+II DG ++    T+   +++
Sbjct:  328 NFTVAIDFTASN----GNPSQSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYHSSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNA 478          
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE5_HUMAN (Copine-5 OS=Homo sapiens GN=CPNE5 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13
Identity = 47/155 (30.32%), Postives = 73/155 (47.10%), Query Frame = 2
Query:  233 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP-----DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAI--TIVEHSGGQYHVLVIIADGQVTXSVDTEHGAISS 673
            N  V IDFT SN        Q  SLH++   Q N Y  A++ +G+ +  +D D + P  GFG     D  V   +P     +   C G + +L  Y   +  ++L GPT+FAP++            G QY VL+II DG ++    T+   +++
Sbjct:  328 NFTVAIDFTASN----GNPSQSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGNQENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDGVISDMAQTKEAIVNA 478          
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE7_HUMAN (Copine-7 OS=Homo sapiens GN=CPNE7 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13
Identity = 51/153 (33.33%), Postives = 73/153 (47.71%), Query Frame = 2
Query:  242 VGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMA--ITIVEHSGG---QYHVLVIIADGQVTXSVDTEHGAI 667
            V IDFT SN           SLH+I   Q N Y +A+  +G+    +D D      GFG       EV      +F P++  C G + V+  Y+  +P ++L GPT+ APII     +   E S G   QY++L+I+ DG VT   DT    +
Sbjct:  385 VAIDFTASN----GDPRNSCSLHYINPYQPNEYLKALVSVGEICQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPEDDECEGIQGVVEAYQNCLPRVQLYGPTNVAPIISKVARVAAAEESTGKASQYYILLILTDGVVTDMADTREAIV 533          
BLAST of EY702494 vs. ExPASy Swiss-Prot
Match: CPNE4_MOUSE (Copine-4 OS=Mus musculus GN=Cpne4 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13
Identity = 50/154 (32.47%), Postives = 72/154 (46.75%), Query Frame = 2
Query:  242 VGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGD------ASTHDQEVFSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEH-----SGGQYHVLVIIADGQVTXSVDTEHGAI 667
            V IDFT SN           SLH+I   Q N Y +A+  +G+    +D D + P FGFG         +HD  + +F  D   C G + V+  Y+  +P L+L GPT+ APII+                QY +L+I+ DG +T   DT    +
Sbjct:  310 VAIDFTASN----GDPRNSCSLHYIHPYQPNEYLKALVAVGEICQDYDSDKMFPAFGFGARIPPEYTVSHDFAI-NFNEDNPECAGIQGVVEAYQSCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLILTDGVITDMADTREAIV 458          
The following BLAST results are available for this feature:
BLAST of EY702494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
CPNE9_RAT1.349e-1431.61Copine-9 OS=Rattus norvegicus GN=Cpne9 PE=2 SV=1[more]
CPNE9_MOUSE1.349e-1431.61Copine-9 OS=Mus musculus GN=Cpne9 PE=2 SV=1[more]
CPNE9_HUMAN1.349e-1431.61Copine-9 OS=Homo sapiens GN=CPNE9 PE=1 SV=2[more]
CPNE8_MOUSE1.349e-1430.32Copine-8 OS=Mus musculus GN=Cpne8 PE=2 SV=2[more]
CPNE8_HUMAN1.349e-1430.32Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2[more]
CPNE7_MOUSE1.491e-1333.99Copine-7 OS=Mus musculus GN=Cpne7 PE=2 SV=1[more]
CPNE5_MOUSE1.491e-1330.32Copine-5 OS=Mus musculus GN=Cpne5 PE=2 SV=1[more]
CPNE5_HUMAN1.491e-1330.32Copine-5 OS=Homo sapiens GN=CPNE5 PE=1 SV=2[more]
CPNE7_HUMAN3.322e-1333.33Copine-7 OS=Homo sapiens GN=CPNE7 PE=2 SV=1[more]
CPNE4_MOUSE3.322e-1332.47Copine-4 OS=Mus musculus GN=Cpne4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-F05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702494 ID=EY702494; Name=EY702494; organism=Citrus sinensis; type=EST; length=859bp
GGTCTAGTTTTATTCATGGAATCATCACAATTATCCGCAGCAGCCACCAT
ATGGGCAACCAAGTCAAGAGTATGCCCCACAACAGTATTATGCCACTCCA
TCTCAAAGCTACAGTGGTCGGGGCCCAGAGTCGACCAGGAAGCTGGAGAG
GAAGTACTCCAAGATAGATGATAACTATCATAGCCTGGAGCAGGTTACAG
ATGCTTTGGCACGTGCTGGGCTAGAGTCATCAAATCTCATTGTTGGTATT
GATTTCACAAAGAGCAATGAGTGGACTGGTGCAAGATCATTTCAGCGGAG
AAGTCTACATCACATTGGTGATGATCAGAATCCCTACGAACAAGCAATAT
CAATTATTGGAAAAACATTGTCTTCCTTTGATGAGGATAACTTAATTCCA
TGTTTTGGGTTTGGAGATGCTTCAACACATGATCAAGAAGTGTTCAGTTT
TTATCCGGACGAAAAGTTTTGTAATGGATTTGAAGAAGTGTTGAGACGAT
ATAGAGAATTGGTCCCTCACCTACGACTTGCAGGACCAACATCTTTTGCC
CCCATTATTGAAATGGCCATCACTATTGTTGAGCACAGTGGGGGGCAGTA
CCATGTCTTAGTGATAATAGCTGATGGGCAGGTGACCANAAGTGTTGATA
CTGAGCATGGCGCCATTAGCTCACAGGGAAAAGAAACTGGTTGAAGCATT
TGTTAAAGCGAGTGAGGACCCCTTGGCGATTATATTAGATTGGGGTAGGA
GATGGGCCCATGGGACCTGATGAGGGAAATTGATGAGTACATTCCTGCTC
GAGGCATTGGATAATTTTCCGGTTGGAAATTTTCCCAAATTATGCCAAGG
ATGTTGAGC
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