CX301108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_AEDAE (60S ribosomal protein L17 OS=Aedes aegypti GN=RpL17 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.694e-38 Identity = 80/186 (43.01%), Postives = 119/186 (63.98%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQ--LIXXXXXXXXXXXXXPTAARLSRKQIAQGRGKSVK 577 MGRY+ +P K+ KA G++LR+H+K+TRE AIK L+ AQ++L+NV + K+ +P ++ GG+GR A K + + WP+K+ L LLKN E+NA+ +GL+VD+LVV H+ N+AP +RRRTYRAHGRIN YMSSP HI+ L P +LS+K++ + + K ++ Sbjct: 1 MGRYAKEPDNPAKSCKARGSNLRVHFKNTRETALAIKRMPLRRAQKFLKNVCEKKECVPFRRFNGGVGRCAQAKHWNTSVGR--WPKKSAEFLLQLLKNAEANADYRGLDVDRLVVDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLTEKEDVVTKAAENEPAKKKLSKKKLQRQKEKMMR 184
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_CARGR (60S ribosomal protein L17 OS=Carabus granulatus GN=RpL17 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.213e-38 Identity = 73/150 (48.67%), Postives = 106/150 (70.67%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQL 475 MGRYS +P V +K KA G++LR+H+K+TRE AIK +L+ AQ +L+NV K+ +P ++ GG+GR + K++ + WP+K+ L +L+N ESNA+ GL+VD+LV+ H+ N+AP +RRRTYRAHGRIN YMSSP HI++ Sbjct: 1 MGRYSREPDVASKTCKARGSNLRVHFKNTRETAMAIKKMSLRRAQAFLKNVTDHKECVPFRRFNGGVGRCSQAKQWGTTQGR--WPKKSAEFLLQMLRNAESNADYSGLDVDRLVIEHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEM 148
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_ANOGA (60S ribosomal protein L17 OS=Anopheles gambiae GN=RpL17 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.213e-38 Identity = 76/151 (50.33%), Postives = 109/151 (72.19%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVS-WPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQL 475 MGRY+ +P +K+ K+ G++LR+H+K+TRE AIK L+ AQ +L+NV++ K+ +P ++ GG+GR A K + G V WP+K+ L LLKN E+NA+ KGL+VD+LV++H+ N+AP +RRRTYRAHGRIN YMSSP HI+L Sbjct: 1 MGRYAKEPDNASKSCKSRGSNLRVHFKNTRETALAIKRMPLRRAQRFLKNVIEKKECVPFRRFNGGVGRCAQAKHW---GTSVGRWPKKSAEFLLQLLKNAEANADYKGLDVDRLVINHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEL 148
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_DIACI (60S ribosomal protein L17 OS=Diaphorina citri GN=RpL17 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.890e-38 Identity = 78/186 (41.94%), Postives = 119/186 (63.98%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI--XXXXXXXXXXXXXPTAARLSRKQIAQGRGKSVK 577 MGRYS +P+ TK+ KA G++LR+H+K+TRE I L+ A ++L+NV + +P +Y GG+GR A K++ + WP+K+ L LLKN ESNA+ +GL+ D+LV+ H+ N+AP++RRRTYRAHGRIN YMSSP HI++I P ++S+K++A+ + K ++ Sbjct: 1 MGRYSKEPRNPTKSCKARGSNLRVHFKNTRETAKTISKMPLRRAIKFLKNVKDQLECVPFRRYNGGVGRCAQAKQWGTTQGR--WPRKSADFLLQLLKNAESNADYRGLDTDRLVIEHIQVNRAPRLRRRTYRAHGRINPYMSSPCHIEVILSERERVVAKPREDEPHKKKISKKKLARAKEKMLR 184
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_LONON (60S ribosomal protein L17 OS=Lonomia obliqua GN=RpL17 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 80/188 (42.55%), Postives = 118/188 (62.77%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI----XXXXXXXXXXXXXPTAARLSRKQIAQGRGKSVK 577 MGRYS P+ K+ KA G++LR+H+K+T E AI+ L+ A YL+NV + K+ IP ++ GG+GR A K++ + WP+K+ L LL+N ESNA+ KGL+VD+LV+ H+ N+AP +RRRTYRAHGRIN YMSSP HI++ P +LS+K++A+ + K ++ Sbjct: 1 MGRYSRDPENPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTQGR--WPKKSAEFPLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVALSEREDAVSRAAPTDDAPAKKKLSKKKLARQKEKMMR 186
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_AGRLI (60S ribosomal protein L17 OS=Agriotes lineatus GN=RpL17 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 72/150 (48.00%), Postives = 105/150 (70.00%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQL 475 MGRYS +P++ K+ KA G++LR+H+K+T E NAI+ LK A YL+NV+ K+ +P ++ GG+GR A K++ + WP+K+ L +L+N ESNA+ GL+VD+LV+ H+ N+A +RRRTYRAHGRIN YMSSP HI++ Sbjct: 1 MGRYSREPEIAAKSCKARGSNLRVHFKNTCETANAIRKMPLKRAVAYLKNVIGHKECVPFRRFNGGVGRCAQAKQWGTTQGR--WPKKSAEFLLQMLRNAESNADYSGLDVDRLVIEHIQVNRAACLRRRTYRAHGRINPYMSSPCHIEM 148
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_BOMMO (60S ribosomal protein L17 OS=Bombyx mori GN=RpL17 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37 Identity = 79/188 (42.02%), Postives = 118/188 (62.77%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI----XXXXXXXXXXXXXPTAARLSRKQIAQGRGKSVK 577 MGRYS +P K+ KA G++LR+H+K+T E AI+ L+ A YL+NV++ K+ IP ++ GG+GR A K++ + WP+K+ L LL+N ESNA+ K L+VD+LV+ H+ N+AP +RRRTYRAHGRIN YMSSP HI++ P +LS+K++A+ + K ++ Sbjct: 1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGR--WPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKKLSKKKLARQKEKMMR 186
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_DROYA (60S ribosomal protein L17 OS=Drosophila yakuba GN=RpL17 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 78/186 (41.94%), Postives = 116/186 (62.37%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI--XXXXXXXXXXXXXPTAARLSRKQIAQGRGKSVK 577 MGRYS + K+ KA G +LR+H+K+T E AIK L+ AQ YL+ V+ K+ +P ++ GG+GR A K++K + WP+K+ L LL+N E+NA+ KGL+ D+LVV H+ N+A +RRRTYRAHGRIN YMSSP H+++I PT +LS+K++ + + K ++ Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQGR--WPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEEVVSKATDDEPTKKKLSKKKLQRQKEKMLR 184
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_CAEEL (60S ribosomal protein L17 OS=Caenorhabditis elegans GN=rpl-17 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37 Identity = 75/148 (50.68%), Postives = 102/148 (68.92%), Query Frame = 2 Query: 35 YSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 YS P+ TK+ KA G+ LR+H+K+T E A++G L+ AQ +L +V + K+ +P ++ GGIGR A K++ + WP K+ LDLLKN ESNAE KGL+VD LV+ H+N +A K+RRRTYRAHGRIN YMSSP HI++I Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRFHGGIGRAAQTKQWNTTQGR--WPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVI 151
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_DROME (60S ribosomal protein L17 OS=Drosophila melanogaster GN=RpL17 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.214e-36 Identity = 77/186 (41.40%), Postives = 115/186 (61.83%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI--XXXXXXXXXXXXXPTAARLSRKQIAQGRGKSVK 577 MGRYS + K+ KA G +LR+H+K+T E AIK L+ AQ YL+ V+ K+ +P ++ GG+GR A K++K + WP+K+ L LL+N E+NA+ KGL+ D+LVV H+ N+A +RRRTYRAHGRIN YMSSP H+++I P +LS+K++ + + K ++ Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQGR--WPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKATDDEPAKKKLSKKKLQRQKEKMLR 184 The following BLAST results are available for this feature:
BLAST of CX301108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301108 ID=CX301108; Name=CX301108; organism=Citrus sinensis; type=EST; length=718bpback to top |