CX301108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_HYPBU (50S ribosomal protein L22P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15 Identity = 48/142 (33.80%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 56 ETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRH-AIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 E K+AKA I YK E+ +KG + A+ +LE V + ++ IPV +Y+G H + KYK P + +P KA + L LL NV +NAE KGL+ ++L + H+ ++ ++R RA GR +HI+++ Sbjct: 12 EEKSAKAMVWDAPISYKKIVELARLLKGMKVDEARRFLERVARGEEPIPVRRYSGKQAHHRGLAAKYKWPIGR--YPVKAAKILLRLLDNVTNNAEVKGLDTERLRIVHIAVHKGRVLKRWMPRAFGRATPKFKKYSHIEIV 151
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_PYRKO (50S ribosomal protein L22P OS=Pyrococcus kodakaraensis GN=rpl22p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 47/139 (33.81%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 62 KAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 + A+ASG LRI KH+ E+ I+G L +A YL++V+ K +P+ ++ G H GK + PG +P K + +L N ++NAE KGL+VD+L + H ++ P +R RA GR + HI+++ Sbjct: 17 RMARASGRDLRISPKHSVELLREIRGMMLNDALRYLDDVIAKKRPVPMKRFNDSQG-HKPGKGF-GPG---RYPVKVAKAVKKILLNAKNNAEQKGLDVDRLKIIHAAAHRGPVLRGYIPRAFGRATPFNEQTTHIEIV 150
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_HALMA (50S ribosomal protein L22P OS=Haloarcula marismortui GN=rpl22p PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 47/149 (31.54%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 35 YSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPG-DKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 YS + +T AKA ++ +KH++ I IKG+ A +YLE V++ +P ++ G+G K K G D +P+KA++ FLDLL+N NA+ +G + + + + HV ++ + + R RA GR +A+ S ++LI Sbjct: 5 YSVEADPDT-TAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGH-----KSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELI 147
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_CALMQ (50S ribosomal protein L22P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl22p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 45/140 (32.14%), Postives = 71/140 (50.71%), Query Frame = 2 Query: 68 AKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDK---VSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 AKA G RI +K E AI+ +K A++Y+E V K IP+ ++T H + P D WP K +FL +L+N+ESNA +GL +D V+ H + ++ ++R RA GR + +I+L+ Sbjct: 29 AKARGFEFRISWKKAIETARAIRFLTIKQAEDYMEKVKDLKAPIPIKEFTRKQAHHNV------PWDGWPVAKWPVKVADSFLQVLRNLESNASYRGLNIDNTVIVHASASRGMRIRNYMPRALGRATPWFQDTVNIELV 162
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_METTP (50S ribosomal protein L22P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl22p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14 Identity = 53/157 (33.76%), Postives = 77/157 (49.04%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGI-GRHAIGKKYKAPGDKVSW-----PQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 MGR + E + A+A G L I KH REI AI+G ++ A+ +L++V+ K A+P +Y + RH + V W PQKA R L +L+N NAE KGLE ++LV+ + N + R RA GR I++I Sbjct: 1 MGRLNYSITPEGRFARAMGVELPISPKHAREICRAIRGMKVEAAERFLQDVIALKRAVPFRRYNRNVPHRHGL----------VGWPAGRFPQKAARAVLRVLENAIGNAEYKGLEKERLVIGYANTKKGRTFRGWMPRAMGRATPKNQETVSIEMI 147
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_METBU (50S ribosomal protein L22P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl22p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 32 RYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 +Y+ + ET +AKA G+ L I K +RE+ AIKG A++YLE+V+ K A+P ++ +G K P +P K L LLKN ESNAE KGL + + ++H N+ + RA GR + + ++++I Sbjct: 5 KYTTELDAET-SAKAMGSELHISPKKSRELCKAIKGMRTNAARQYLEDVVILKQAVPFGRHNDSLGHR------KGPMAAGRYPVKVASEMLKLLKNAESNAEYKGLNPEHMFIAHTAMNRGRVIHGMRPRARGRASPENTETVNLEMI 146
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_THEVO (50S ribosomal protein L22P OS=Thermoplasma volcanium GN=rpl22p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14 Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 2 Query: 53 VETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 V+ A+A I K I + I+G L A++ LE+V+ K AIP +Y + H GK PG +P KA + F+DLL NVE+NAE KG+ D L++ HV N+ +++ T +A+GR A ++++I Sbjct: 8 VDENNARARIVEADISLKDAVNIAHHIRGMKLDYAKQILEDVVSKKYAIPYFRYLDSVS-HRPGK---GPG---RYPVKAAKVFIDLLSNVENNAEFKGMNTDSLIIKHVAANKGRMIKKYTPKAYGRAGANFKDLINLEVI 142
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_THEPD (50S ribosomal protein L22P OS=Thermofilum pendens (strain Hrk 5) GN=rpl22p PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14 Identity = 48/149 (32.21%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 32 RYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 RYS + + E + AKAS + + YK T E IKG++++ A+ L + + K ++P+ +Y +G + PG +P K + L LL N+E+NAE KGL V+ L + H ++ K+R RA GR Y H+++I Sbjct: 5 RYSVELEPE-RTAKASLRDVSMSYKLTVETLRLIKGKSIEEARRILTEIAEMKRSVPLKRYNKKVGHRS---DVPGPG---RYPVKVAKNLLKLLDNLENNAEFKGLNVENLRIVHAAAHKGMKIRNYLPRAFGRATPYYDQLVHVEII 146
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_PYRHO (50S ribosomal protein L22P OS=Pyrococcus horikoshii GN=rpl22p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14 Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 17 GTRMGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 G R G YS + + A+ASG LRI K E+ ++G L +A YL+ V+ K +P+ +Y G H GK + PG +P K + +L N ++NAE KGL+ DKL + H+ ++ P +R RA GR + HI+++ Sbjct: 2 GKRFG-YSFQNFDPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDEVIALKRPVPLRRYNDSQG-HKPGKGF-GPG---RYPVKVAKAIKKVLLNAKNNAEQKGLDPDKLKIIHIAAHRGPVLRGWYPRAFGRATPFNEQTTHIEVV 149
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_METVS (50S ribosomal protein L22P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14 Identity = 54/147 (36.73%), Postives = 72/147 (48.98%), Query Frame = 2 Query: 59 TKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIP-------VTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 +K AKA G LRI KH EI I G L+ A +L VL + +P V G IG HA G+ +PQKAT L +L N + NAE KGL +KL + H++ N+ ++R RA GR + HIQ+I Sbjct: 13 SKTAKAMGRTLRISKKHALEICREINGMKLETAVSFLNRVLALETPVPFKVHNKDVPHRKGKIGTHA-GR----------FPQKATEEILKVLDNAKKNAEYKGLNTEKLRIKHISSNKGFIIKRFMPRAFGRASPKYQETIHIQVI 148 The following BLAST results are available for this feature:
BLAST of CX301108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301108 ID=CX301108; Name=CX301108; organism=Citrus sinensis; type=EST; length=718bpback to top |