CX301108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_METJA (50S ribosomal protein L22P OS=Methanocaldococcus jannaschii GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14 Identity = 50/152 (32.89%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 26 MGRYSAKPKVET-KAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 MG+ K +V K A+A G ++ I KH REI +I G L A ++LE+V+ + + ++ +G H GK G +P KA + L +L++ ++NAE KGL +KL + H++ N+ ++R RA GR HIQ+I Sbjct: 4 MGKLKYKIQVNPEKTARAMGRNIPISRKHAREICKSINGMKLDEAIKFLEDVIAMRRPVLFRRHCKKVG-HRKGKLGWPAG---RYPVKAAKAILKILQHAKANAEYKGLNTEKLRIKHISTNKGITIKRYMPRAFGRATPKFQETVHIQVI 151
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_SULSO (50S ribosomal protein L22P OS=Sulfolobus solfataricus GN=rpl22p PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14 Identity = 47/142 (33.10%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 56 ETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHA-IGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 E K AKA + + + AI+G L +A+++L VL+ K+A+P +Y G + I K+K + +P+KA R L +L+N E+NA KGL+VDKL++ H+ ++ ++R RA GR A ++I++I Sbjct: 13 ELKIAKAVIRDVPESIRDLYNVCKAIRGMYLNDAKDFLNRVLEEKEALPFWRYNKGASHKSNISAKWKIKAGR--YPKKAIRQVLKVLENAEANATNKGLDVDKLIIRHIAAHKGITLQRYMPRAFGRATAKYRRTSNIEVI 152
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_METBF (50S ribosomal protein L22P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl22p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.467e-14 Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 35 YSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 YS K ET +KA G+ L I K +RE+ IKG + A+++LE+V+ K A+P ++ G G K P +P A++ L +L+N ESNAE KGLE + ++H + +R RA GR + +I++I Sbjct: 6 YSVKEDPET-TSKAMGSELHISPKKSREVCCKIKGMKVPEARKFLEDVIALKQAVPFKRHHDGSGHR------KGPMAAGRYPVSASKEILKILRNAESNAEYKGLEPANMYITHAAIQRGRVIRGFMPRARGRATPKDTETVNIEMI 146
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_PYRCJ (50S ribosomal protein L22P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl22p PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.444e-13 Identity = 44/138 (31.88%), Postives = 76/138 (55.07%), Query Frame = 2 Query: 68 AKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVS-WPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 AKA R+ +K + E+ IKG LK A+ +LE+V++ K IP+ + HA + G V+ WP K + +L LL+N+E+NA+ KGL+V++LV+ H ++ K+ RA GR + +++++ Sbjct: 31 AKAYAPEQRMSWKKSVEVARFIKGMTLKQAKAWLEDVVKLKRPIPIKTFKKKQAHHATPWE----GWPVAKWPVKVAKRYLQLLENLENNAKFKGLDVERLVIIHAAAHKGIKIPNIMPRAFGRATPFNEETVNVEIV 164
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_THENV (50S ribosomal protein L22P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl22p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.886e-13 Identity = 43/149 (28.86%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 32 RYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 +Y K E + AKA ++ +K + E+ I+G L+ A+ +LE+V++ K IP+ + HA + WP K R FLDLL+N+E+NA +GL+V+++V+ H ++ ++ RA GR + ++++I Sbjct: 21 KYGVKVSAE-QIAKAYAPEQKMSWKKSVEVARFIEGMTLRQAKSWLEDVVKMKRPIPIRTFKKKQAHHATPW---SGWPVAKWPVKVARRFLDLLENLENNARFRGLDVERVVIVHAAAHKGYRIHNIMPRAFGRATRFDEQTVNVEVI 165
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_PYRAB (50S ribosomal protein L22P OS=Pyrococcus abyssi GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 49/154 (31.82%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 26 MGR---YSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 MGR YS + + A+ASG LRI K E+ ++G L +A YL++V+ + +P+ +Y G H GK + PG +P K + +L N ++NA+ KGL+ DKL + H+ ++ P +R RA GR + HI+++ Sbjct: 1 MGRRFDYSFQNFDPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRPVPLKRYNDSQG-HKPGKGF-GPG---RYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVV 149
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_NITMS (50S ribosomal protein L22P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 47/155 (30.32%), Postives = 85/155 (54.84%), Query Frame = 2 Query: 26 MGR--YSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVS--WPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 MGR Y+ + T+ ++S + +KH RE+ AIKG +++ A++YL+ V+ A+ +Y +G +KA +S +PQK R F+ +L N+ESNAE KG+++D+L + + ++ ++R RA GR + H++L+ Sbjct: 1 MGRFGYAFQNYDATRHVRSSVREKDMSHKHAREVAVAIKGLSIEKARDYLQAVVNKDRAVAFRRYKNQVG-------HKADPGMMSGRYPQKTAREFIKVLDNLESNAEYKGMDLDRLKIVNATVHKGVIVKRFIPRAMGRATPKNNVLTHVELV 148
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_PYRAE (50S ribosomal protein L22P OS=Pyrobaculum aerophilum GN=rpl22p PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 43/138 (31.16%), Postives = 75/138 (54.35%), Query Frame = 2 Query: 68 AKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVS-WPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 A+A R+ +K + E+ IKG LK A+ +LE+V++ K +P+ + HA + G V+ WP K R FL +L+N+E+NA +GL+VD++V+ H ++ K+ RA GR + +++L+ Sbjct: 32 ARAYAPEQRMSWKKSVEVARFIKGMTLKQAKTWLEDVVKLKRPVPIKTFKKKQAHHATPWE----GWPVAKWPVKVARRFLQVLENLENNARFRGLDVDRVVIVHAAAHKGFKIPNIMPRAFGRATRFDEQTVNVELV 165
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_SULTO (50S ribosomal protein L22P OS=Sulfolobus tokodaii GN=rpl22p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13 Identity = 44/142 (30.99%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 56 ETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIG-RHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 E K AKA ++ + + AI+G L +A+++L NVL+ K+A+P K++ G R I K+K + +P+KA + L +L+N E+NA +KGL+++ + + H+ ++ ++R RA GR +HI++I Sbjct: 13 ENKLAKAVIKNVPASIRDLYNVCKAIRGMKLNDAKQFLNNVLEEKEALPFWKHSHGASHRSNISPKWKVKSGR--YPKKAIKYVLKVLENAENNANSKGLDLENVKIVHIAAHKGIILKRYMPRAFGRSTRKYRYTSHIEVI 152
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL22_PYRFU (50S ribosomal protein L22P OS=Pyrococcus furiosus GN=rpl22p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13 Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = 2 Query: 62 KAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 + A+AS LRI K E+ ++G L +A YL++V+ K +P+ +Y G H GK + PG +P K + +L NV++NA KGL+ DKL + H+ ++ P +R RA GR + HI+++ Sbjct: 16 RMARASARDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALKRPVPLKRYNDSQG-HKPGKGF-GPG---RYPVKVAKAIKKVLLNVKNNAVQKGLDPDKLKIIHIAAHKGPVLRGWYPRAFGRATPFNEQTTHIEVV 149 The following BLAST results are available for this feature:
BLAST of CX301108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301108 ID=CX301108; Name=CX301108; organism=Citrus sinensis; type=EST; length=718bpback to top |