CX301099

Overview
NameCX301099
Unique NameCX301099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_XENTR (Triosephosphate isomerase OS=Xenopus tropicalis GN=tpi1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.894e-40
Identity = 77/102 (75.49%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TKAIA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR+WLK NVS +VA S RIIYGGSV G  CKEL AQPD+DGFLVGGASLKPEFIDII +
Sbjct:  145 EQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLREWLKTNVSEDVAKSVRIIYGGSVTGGTCKELGAQPDIDGFLVGGASLKPEFIDIINA 246
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.894e-40
Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  145 EQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 246
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.894e-40
Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  146 EQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 5.894e-40
Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  146 EQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 5.894e-40
Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  146 EQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 5.894e-40
Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  146 EQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_MOUSE (Triosephosphate isomerase OS=Mus musculus GN=Tpi1 PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 1.715e-39
Identity = 77/102 (75.49%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NV+  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  146 EQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVNDGVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_GORGO (Triosephosphate isomerase OS=Gorilla gorilla gorilla GN=TPI1 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.715e-39
Identity = 77/102 (75.49%), Postives = 85/102 (83.33%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TK I + + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA STRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  146 EQTKVITDNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_BOVIN (Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE=2 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 2.240e-39
Identity = 77/102 (75.49%), Postives = 85/102 (83.33%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TK IA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA S RIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  146 EQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSARIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
[Close]
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_RAT (Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.821e-39
Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TKAIA+ + +W  VVLAYEPVWAIGTGK ATP QAQEVH +LR WLK NVS  VA  TRIIYGGSV GA CKELA+QPDVDGFLVGGASLKPEF+DII +
Sbjct:  146 EQTKAIADNVKDWCKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKCNVSEGVAQCTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINA 247
The following BLAST results are available for this feature:
BLAST of CX301099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_XENTR5.894e-4075.49Triosephosphate isomerase OS=Xenopus tropicalis GN... [more]
TPIS_RABIT5.894e-4076.47Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]
TPIS_PONAB5.894e-4076.47Triosephosphate isomerase OS=Pongo abelii GN=TPI1 ... [more]
TPIS_PANTR5.894e-4076.47Triosephosphate isomerase OS=Pan troglodytes GN=TP... [more]
TPIS_HUMAN5.894e-4076.47Triosephosphate isomerase OS=Homo sapiens GN=TPI1 ... [more]
TPIS_CANFA5.894e-4076.47Triosephosphate isomerase OS=Canis familiaris GN=T... [more]
TPIS_MOUSE1.715e-3975.49Triosephosphate isomerase OS=Mus musculus GN=Tpi1 ... [more]
TPIS_GORGO1.715e-3975.49Triosephosphate isomerase OS=Gorilla gorilla goril... [more]
TPIS_BOVIN2.240e-3975.49Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE... [more]
TPIS_RAT3.821e-3976.47Triosephosphate isomerase OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC08005G03SK PhyRootSw1 Citrus sinensis cDNA clone C08005G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301099 ID=CX301099; Name=CX301099; organism=Citrus sinensis; type=EST; length=577bp
GGAATTCGGCACGAGGAAACAAAAGCAATCGCAGAAAAAATATCCAACTG
GGACAATGTTGTGTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGA
AGGTTGCAACCCCTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAA
TGGCTTAAAGACAATGTCAGTGCTGAAGTTGCAGCATCAACTAGAATCAT
CTACGGAGGTTCTGTAAATGGAGCAAATTGCAAAGAATTGGCAGCACAAC
CTGATGTAGATGGATTTTTGGTTGGTGGAGCTTCTCTAAAGCCGGAGTTC
ATCGATATTATCAAGTCTGCCACAGTGAAGAAGAATTGAAGTTAAGACCA
AGCTACTCGGCTTGCTGATGCCTGCAGTTTTCTCTGTTATGCTTTCTGGA
AACTAGCGTTGTAATTTTTGTGGTCTGTTAAGTGTTACCAACGCCTTTCG
AGTATAATAAGTTAAATTTTCAGAATTGTTAAGAATCTCTTTCCTATTTC
AGTGGGGATTTGAAACTTATCATTGTGGATTTAATAAATGTTTGCTTTTC
CCTTCTTGCAAAAAAAAAAAAAAAAAA
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