CX301099

Overview
NameCX301099
Unique NameCX301099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPISL_HUMAN (Putative triosephosphate isomerase-like protein LOC286016 OS=Homo sapiens PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 6.312e-34
Identity = 67/102 (65.69%), Postives = 79/102 (77.45%), Query Frame = 1
Query:   13 EETKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+TK IA+ + +W  V+LAY+PVWA GTGK ATP QAQEVH +LR WLK N+S  VA ST IIYGGSV  A CKELA+QPDV  FL+ G SLKPEF+DII +
Sbjct:  127 EQTKVIADNVKDWSKVILAYDPVWATGTGKTATPQQAQEVHKKLRGWLKSNISDAVAQSTGIIYGGSVTKATCKELASQPDVAAFLMSGVSLKPEFVDIINA 228          
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_LEIME (Triosephosphate isomerase OS=Leishmania mexicana PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.133e-33
Identity = 69/101 (68.32%), Postives = 81/101 (80.20%), Query Frame = 1
Query:   16 ETKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 312
            +T AIA K++   W+ VVLAYEPVWAIGTGKVATP QAQEVH  LRKW+ +N+  +VAA  RI+YGGSVN AN   L A+PD++GFLVGGASLKPEF DII
Sbjct:  147 QTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLKPEFRDII 247          
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_EMENI (Triosephosphate isomerase OS=Emericella nidulans GN=tpiA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.091e-33
Identity = 67/103 (65.05%), Postives = 83/103 (80.58%), Query Frame = 1
Query:   16 ETKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            +  A A+++S   W  VV+AYEPVWAIGTGKVAT  QAQEVH+ +RKWLKD +SAE A +TRIIYGGSV+  NCK+LA + D+DGFLVGGASLKP F+DI+ +
Sbjct:  145 QLNAAAKELSKEQWAKVVIAYEPVWAIGTGKVATTEQAQEVHSAIRKWLKDAISAEAAENTRIIYGGSVSEKNCKDLAKEADIDGFLVGGASLKPAFVDIVNA 247          
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_SCHJA (Triosephosphate isomerase OS=Schistosoma japonicum GN=TPI PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.979e-33
Identity = 72/104 (69.23%), Postives = 78/104 (75.00%), Query Frame = 1
Query:   16 ETKAIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            +  AIA KI +   W  VV+AYEPVWAIGTGKVA+P QAQEVH  LRKW K N  + V    RIIYGGSV  ANCKELA Q DVDGFLVGGASLKPEFIDI K+
Sbjct:  147 QLNAIANKIKSIDEWKRVVVAYEPVWAIGTGKVASPGQAQEVHNFLRKWFKTNTPSGVDQQIRIIYGGSVTAANCKELAQQHDVDGFLVGGASLKPEFIDICKA 250          
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_COPC7 (Triosephosphate isomerase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TPI PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.190e-32
Identity = 65/104 (62.50%), Postives = 85/104 (81.73%), Query Frame = 1
Query:   13 EETKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            E+  A+ +++   +W N+V+AYEPVWAIGTGKVAT +QAQE H ++RK+L   VS +VA+ TR+IYGGSVN AN K+LA+Q D+DGFLVGGASLKPEF+DII +
Sbjct:  145 EQLSAVVKQLKEEDWSNIVIAYEPVWAIGTGKVATTSQAQETHVDVRKYLATAVSPKVASETRVIYGGSVNAANSKDLASQQDIDGFLVGGASLKPEFVDIINA 248          
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_SCHMA (Triosephosphate isomerase OS=Schistosoma mansoni GN=TPI PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.031e-32
Identity = 72/104 (69.23%), Postives = 77/104 (74.04%), Query Frame = 1
Query:   16 ETKAIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            + KAIA KI +   W  VV+AYEPVWAIGTGKVATP QAQEVH  LRKW K N    V    RIIYGGSV  ANCKELA Q DVDGFLVGGASLKPEF +I K+
Sbjct:  147 QLKAIANKIKSADEWKRVVVAYEPVWAIGTGKVATPQQAQEVHNFLRKWFKTNAPNGVDEKIRIIYGGSVTAANCKELAQQHDVDGFLVGGASLKPEFTEICKA 250          
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_ASPOR (Triosephosphate isomerase OS=Aspergillus oryzae GN=tpiA PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.908e-32
Identity = 66/104 (63.46%), Postives = 82/104 (78.85%), Query Frame = 1
Query:   13 EETKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            ++  A A++++   W  VV+AYEPVWAIGTGKVAT  QAQEVHA +RKWL D +S E + +TRIIYGGSV+  NC+ELA + DVDGFLVGGASLKP F+DII +
Sbjct:  146 KQLNAAAKELTKEQWSKVVIAYEPVWAIGTGKVATTQQAQEVHAAIRKWLADAISPEASENTRIIYGGSVSEKNCRELAQERDVDGFLVGGASLKPAFVDIINA 249          
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_TRYBB (Triosephosphate isomerase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.245e-31
Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 1
Query:   25 AIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            AIA+K+  ++W  VV+AYEPVWAIGTGKVATP QAQE HA +R W+   + A+VA   RI+YGGSVNG N + L  Q DV+GFLVGGASLKPEF+DIIK+
Sbjct:  149 AIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIKA 248          
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_TAESO (Triosephosphate isomerase OS=Taenia solium PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.001e-31
Identity = 64/101 (63.37%), Postives = 78/101 (77.23%), Query Frame = 1
Query:   25 AIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            AIA+ + +   WD VV+AYEPVWAIGTGK ATPAQAQEVH  +R W++ +V A +A   RI+YGGSV  +N K+L  QPDVDGFLVGGASLKP+FI II +
Sbjct:  148 AIAKNVPSKEAWDKVVIAYEPVWAIGTGKTATPAQAQEVHKVVRDWIRKHVDAGIADKVRILYGGSVTASNAKDLGTQPDVDGFLVGGASLKPDFITIINA 248          
BLAST of CX301099 vs. ExPASy Swiss-Prot
Match: TPIS_BOMMO (Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 6.532e-31
Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 1
Query:   16 ETKAIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 318
            + KA+   I + W+N+VLAYEPVWAIGTGK ATP QAQ+VH  LR WL  NVS  V+ + RI YGGSV  AN KELA+  D+DGFLVGGASLKPEF++I+ +
Sbjct:  145 QLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLKPEFVEIVNA 246          
The following BLAST results are available for this feature:
BLAST of CX301099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPISL_HUMAN6.312e-3465.69Putative triosephosphate isomerase-like protein LO... [more]
TPIS_LEIME3.133e-3368.32Triosephosphate isomerase OS=Leishmania mexicana P... [more]
TPIS_EMENI4.091e-3365.05Triosephosphate isomerase OS=Emericella nidulans G... [more]
TPIS_SCHJA6.979e-3369.23Triosephosphate isomerase OS=Schistosoma japonicum... [more]
TPIS_COPC71.190e-3262.50Triosephosphate isomerase OS=Coprinopsis cinerea (... [more]
TPIS_SCHMA2.031e-3269.23Triosephosphate isomerase OS=Schistosoma mansoni G... [more]
TPIS_ASPOR5.908e-3263.46Triosephosphate isomerase OS=Aspergillus oryzae GN... [more]
TPIS_TRYBB2.245e-3165.00Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_TAESO5.001e-3163.37Triosephosphate isomerase OS=Taenia solium PE=2 SV... [more]
TPIS_BOMMO6.532e-3162.75Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE... [more]

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Properties
Property NameValue
Genbank descriptionC08005G03SK PhyRootSw1 Citrus sinensis cDNA clone C08005G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301099 ID=CX301099; Name=CX301099; organism=Citrus sinensis; type=EST; length=577bp
GGAATTCGGCACGAGGAAACAAAAGCAATCGCAGAAAAAATATCCAACTG
GGACAATGTTGTGTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGA
AGGTTGCAACCCCTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAA
TGGCTTAAAGACAATGTCAGTGCTGAAGTTGCAGCATCAACTAGAATCAT
CTACGGAGGTTCTGTAAATGGAGCAAATTGCAAAGAATTGGCAGCACAAC
CTGATGTAGATGGATTTTTGGTTGGTGGAGCTTCTCTAAAGCCGGAGTTC
ATCGATATTATCAAGTCTGCCACAGTGAAGAAGAATTGAAGTTAAGACCA
AGCTACTCGGCTTGCTGATGCCTGCAGTTTTCTCTGTTATGCTTTCTGGA
AACTAGCGTTGTAATTTTTGTGGTCTGTTAAGTGTTACCAACGCCTTTCG
AGTATAATAAGTTAAATTTTCAGAATTGTTAAGAATCTCTTTCCTATTTC
AGTGGGGATTTGAAACTTATCATTGTGGATTTAATAAATGTTTGCTTTTC
CCTTCTTGCAAAAAAAAAAAAAAAAAA
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