CX301077

Overview
NameCX301077
Unique NameCX301077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_BURP8 (Pyridoxamine kinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=pdxY PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24
Identity = 62/202 (30.69%), Postives = 109/202 (53.96%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI------TSINIDGNLFLIGSHQKEKGQSP 618
            IQSH V G+ GN ++ FP++ LG +V P+++VQFSNHT Y  ++G  ++  Q+  L+EG+ A  +L     +L+GY+G+      ++++V  +++ NP+ +Y CDPVMG      V   +       +  V+ ++ PN  E ++L G  I +  +   AC+ L   GP  V++       S+    N+ ++   +   GQ P
Sbjct:    7 IQSHVVFGHAGNGASEFPMRRLGVNVWPLNTVQFSNHTQYGHWEGSAIDASQMLALVEGIGAIGMLPRCDAVLSGYLGTPEQAQAVIEIVRAVKAANPHALYFCDPVMGTATGYRVEPGIQEFLVRTMPEVSDVMCPNHSELQRLVGREIETVEEAVAACRELMKRGPKMVLVKHLLDRNSLADRFNMLVVTGREAWMGQRP 208          
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_PROMI (Pyridoxamine kinase OS=Proteus mirabilis GN=pdxY PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.841e-24
Identity = 66/183 (36.07%), Postives = 102/183 (55.74%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYP-TFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADG-REACKILHAAGPAKVVITSINIDG 570
            IQSH V G+ GN  A FP + +G +V P+++VQFSNHT YP  + G V+  + + ++++G+ A   L     +L+GY+GS      I+ +V+K++  NPN  Y CDPVMG   K   VP E+  V  E  +P++ ++ PN  E E L G       D   +A + L   GP  V++  ++  G
Sbjct:    7 IQSHVVFGHAGNSXAEFPXRRMGVNVWPLNTVQFSNHTQYPEKWTGCVMXAEHITEIVDGIAAIGKLAQCDAVLSGYLGSAEQGRRIVDIVKKVKQANPNAWYFCDPVMGHPEKGCIVPPEVSGVLCEDALPISDIIAPNLLELETLAGGATLHNVDQCVKAARQLCQQGPKIVLVKHLSRAG 189          
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_SALTY (Pyridoxamine kinase OS=Salmonella typhimurium GN=pdxY PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.301e-23
Identity = 65/205 (31.71%), Postives = 111/205 (54.15%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI 639
            IQSH V G+ GN +A FP++ LG +V P+++VQFSNHT Y  + G V+    L ++++G+ +   L +   +L+GY+GS      IL +V ++++ NP   Y CDPVMG  ++G +  P  +   +    +P + ++ PN  E E L+   + +  D  +A + L A GP  V++              H    G S E+F++++
Sbjct:    7 IQSHVVFGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIADIGQLAHCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPG-VAEFHVRYALPASDIIAPNLIELEILSKHSVNNVDDAVQAARELIAQGPEIVLV-------------KHLARAGYSSERFEMLL 197          
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_SALTI (Putative pyridoxamine kinase OS=Salmonella typhi GN=pdxY PE=5 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.301e-23
Identity = 65/205 (31.71%), Postives = 111/205 (54.15%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI 639
            IQSH V G+ GN +A FP++ LG +V P+++VQFSNHT Y  + G V+    L ++++G+ +   L +   +L+GY+GS      IL +V ++++ NP   Y CDPVMG  ++G +  P  +   +    +P + ++ PN  E E L+   + +  D  +A + L A GP  V++              H    G S E+F++++
Sbjct:    7 IQSHVVFGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIADIGQLAHCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPG-VAEFHVRYALPASDIIAPNLIELEILSKHSVNNVNDAVQAARELIAQGPEIVLV-------------KHLARAGYSSERFEMLL 197          
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_SALPA (Pyridoxamine kinase OS=Salmonella paratyphi A GN=pdxY PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.301e-23
Identity = 65/205 (31.71%), Postives = 111/205 (54.15%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI 639
            IQSH V G+ GN +A FP++ LG +V P+++VQFSNHT Y  + G V+    L ++++G+ +   L +   +L+GY+GS      IL +V ++++ NP   Y CDPVMG  ++G +  P  +   +    +P + ++ PN  E E L+   + +  D  +A + L A GP  V++              H    G S E+F++++
Sbjct:    7 IQSHVVFGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIADIGQLAHCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPG-VAEFHVRYALPASDIIAPNLIELEILSKHSVNNVNDAVQAARELIAQGPEIVLV-------------KHLARAGYSSERFEMLL 197          
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_SALCH (Pyridoxamine kinase OS=Salmonella choleraesuis GN=pdxY PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.301e-23
Identity = 65/205 (31.71%), Postives = 111/205 (54.15%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI 639
            IQSH V G+ GN +A FP++ LG +V P+++VQFSNHT Y  + G V+    L ++++G+ +   L +   +L+GY+GS      IL +V ++++ NP   Y CDPVMG  ++G +  P  +   +    +P + ++ PN  E E L+   + +  D  +A + L A GP  V++              H    G S E+F++++
Sbjct:    7 IQSHVVFGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIADIGQLAHCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPG-VAEFHVRYALPASDIIAPNLIELEILSKHSVNNVDDAVQAARELIAQGPEIVLV-------------KHLARAGYSSERFEMLL 197          
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_BURMA (Pyridoxamine kinase OS=Burkholderia mallei GN=pdxY PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.301e-23
Identity = 64/228 (28.07%), Postives = 117/228 (51.32%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLL 696
            IQSH + G+ GN +AVFP+Q LG +V P+++VQ SNH  Y  + G  ++  ++  L++G+ A   L     +L+G++GS +     +++V  +++ NPN  Y CDP MG  G +     +      ++  +A  + PN  E ++L G RI + A+   AC+ +    P  +++  ++         N+ ++   +   GQ P      +   P +  G GDL +A+ +
Sbjct:    7 IQSHVIYGHAGNSAAVFPMQRLGVNVWPLNTVQLSNHMQYGHWAGSAIDAAKMEQLVDGIAAIGALKRCDAVLSGFLGSPAQARAAVEIVRTVKATNPNAWYFCDPAMGQTGGIRPEPGVEEFIVAELPELADGMAPNHSELQKLAGQRIETVAEAVAACRSIIRRSPQVILVKHLHDRNSPADRFNMLVVTETEAWIGQRP------LYAFPRHPVGVGDLTSAIFV 228          
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_ERWCT (Pyridoxamine kinase OS=Erwinia carotovora subsp. atroseptica GN=pdxY PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22
Identity = 61/178 (34.27%), Postives = 103/178 (57.87%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYR-EKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN 561
            IQSH V G+ GN +A FP++ +G +V P+++VQFSNHT Y  + G V+    L ++++G+   + L     +L+GYIGS      IL +V ++++ NP+ +Y CDPVMG   K  + +  VS +  ++ +  A ++ PN  E E L G  + + A+  E  + L   GP  V++  ++
Sbjct:    7 IQSHVVFGHAGNSAAEFPMRRMGANVWPLNTVQFSNHTQYGHWTGCVMPASHLTEVVQGIANIDKLKTCNAVLSGYIGSAEQGEHILGIVRQVKAANPDALYFCDPVMGTPEKGCIVAPGVSDFHCQQSLLAADIVAPNLPELELLGGRTVHNVAEAVETARALCEKGPKIVLVKHLS 184          
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_SHISS (Pyridoxamine kinase OS=Shigella sonnei (strain Ss046) GN=pdxY PE=3 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 7.140e-22
Identity = 64/205 (31.22%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI 639
            IQSH V G+ GN +A FP++ LG +V P+++VQFSNHT Y  + G V+    L ++++G+ A + L+    +L+GY+GS      IL +V ++++ NP   Y CDPVMG  ++G +  P  +   +    +P + ++ PN  E E L    + +  +   A + L A GP  V++              H    G S ++F++++
Sbjct:    8 IQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPG-VAEFHVRHGLPASDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLV-------------KHLARAGYSRDRFEMLL 198          
BLAST of CX301077 vs. ExPASy Swiss-Prot
Match: PDXY_SHIBS (Pyridoxamine kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=pdxY PE=3 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 7.140e-22
Identity = 64/205 (31.22%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   34 IQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI 639
            IQSH V G+ GN +A FP++ LG +V P+++VQFSNHT Y  + G V+    L ++++G+ A + L+    +L+GY+GS      IL +V ++++ NP   Y CDPVMG  ++G +  P  +   +    +P + ++ PN  E E L    + +  +   A + L A GP  V++              H    G S ++F++++
Sbjct:    8 IQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPG-VAEFHVRHGLPASDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLV-------------KHLARAGYSRDRFEMLL 198          
The following BLAST results are available for this feature:
BLAST of CX301077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
PDXY_BURP84.472e-2430.69Pyridoxamine kinase OS=Burkholderia phymatum (stra... [more]
PDXY_PROMI5.841e-2436.07Pyridoxamine kinase OS=Proteus mirabilis GN=pdxY P... [more]
PDXY_SALTY1.301e-2331.71Pyridoxamine kinase OS=Salmonella typhimurium GN=p... [more]
PDXY_SALTI1.301e-2331.71Putative pyridoxamine kinase OS=Salmonella typhi G... [more]
PDXY_SALPA1.301e-2331.71Pyridoxamine kinase OS=Salmonella paratyphi A GN=p... [more]
PDXY_SALCH1.301e-2331.71Pyridoxamine kinase OS=Salmonella choleraesuis GN=... [more]
PDXY_BURMA1.301e-2328.07Pyridoxamine kinase OS=Burkholderia mallei GN=pdxY... [more]
PDXY_ERWCT3.205e-2234.27Pyridoxamine kinase OS=Erwinia carotovora subsp. a... [more]
PDXY_SHISS7.140e-2231.22Pyridoxamine kinase OS=Shigella sonnei (strain Ss0... [more]
PDXY_SHIBS7.140e-2231.22Pyridoxamine kinase OS=Shigella boydii serotype 4 ... [more]

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Properties
Property NameValue
Genbank descriptionC08005E04SK PhyRootSw1 Citrus sinensis cDNA clone C08005E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301077 ID=CX301077; Name=CX301077; organism=Citrus sinensis; type=EST; length=758bp
CTCGTGCCGCCTCGTGCCGAATTCGGCACGAGGATACAGTCGCATACTGT
TCAGGGGTATGTTGGAAATAAATCAGCTGTCTTTCCTCTCCAACTACTGG
GCTATGACGTGGATCCAATCCATTCAGTACAGTTCTCAAACCACACAGGA
TACCCAACTTTCAAGGGCCAAGTTTTGAATGGACAACAATTATGCGACTT
AATAGAAGGACTGGAAGCCAATAATCTATTGTACTATACTCATTTATTAA
CAGGTTATATTGGTTCTGTTTCTTTTCTGAACACGATACTGCAAGTTGTT
GAAAAGCTTCGCTCTATAAACCCAAATCTGATATACGTTTGTGATCCAGT
GATGGGTGACGAGGGAAAGCTCTATGTTCCTTCCGAGCTAGTATCAGTAT
ACCGTGAGAAGGTTGTTCCAGTGGCCTCAATGTTGACCCCTAATCAGTTT
GAAGCAGAACAGTTGACTGGTTTCAGGATTGGGAGTGAAGCAGATGGGAG
GGAAGCTTGTAAGATTCTTCATGCTGCTGGACCTGCAAAGGTTGTGATCA
CAAGCATAAATATAGATGGCAATCTTTTCCTGATTGGCAGTCATCAGAAG
GAAAAGGGTCAGTCTCCGGAGCAGTTCAAGATTGTGATACCCAAAATTCC
TGCATATTTTACAGGAACTGGTGATCTAATGACTGCACTCCTGCTTGGAT
GGAGTAATAATATAGGGACACCTTGACATTGCTGCTGAGCTTGCAGTATC
AAGTTGCA
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