CX301033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METTH (50S ribosomal protein L14P OS=Methanobacterium thermoautotrophicum GN=rpl14p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.252e-30 Identity = 66/126 (52.38%), Postives = 89/126 (70.63%), Query Frame = 3 Query: 108 RTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 + T LPVGA + C DNTGA+ + IISV G KG +L +A VGD+V+ S KKG ++R++V AVIVRQ+K +RR +GL + FEDNA VIV+ +G +KGS + GPVAKE AD WP + S + I+ Sbjct: 7 KVTRALPVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRREVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPVAKEAADRWPSVGSAASIIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_CENSY (50S ribosomal protein L14P OS=Cenarchaeum symbiosum GN=rpl14p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.247e-30 Identity = 71/141 (50.35%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 72 GKGRGGAVGLK-FR--TTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 G+ RG A G++ FR T LPVGA V CADN+GAK L II V K R+++LP+A+VGD V KKG ELRK+VH AVI+RQ+ RR G+ + FEDNA V+ +GEMKG+ + GPVA E ++ WPR+A+ + ++ Sbjct: 4 GRSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGPVAAEASEKWPRLANLASMVV 144
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METS3 (50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29 Identity = 65/121 (53.72%), Postives = 86/121 (71.07%), Query Frame = 3 Query: 123 LPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 LP+GA + C DNTGA+ + IISV G KG +L A VGDLV+AS KKG ++R++V AV++RQ+K + R +GL + FEDNA VI+ +G +KGS V GPVAKE AD WP + S + SIL Sbjct: 12 LPIGATLQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRREVVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPVAKEAADRWPSVGS-AASIL 131
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_SULTO (50S ribosomal protein L14P OS=Sulfolobus tokodaii GN=rpl14p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29 Identity = 66/133 (49.62%), Postives = 88/133 (66.17%), Query Frame = 3 Query: 69 MGKGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIAS 467 +G +G GL+ TT V ADN+GAK +II +YG KG L ++P A++ DLVM S +KG PE+RK+ AVIVRQR +RR +G +I FEDNA VIVN G KG+ + GP+AKE A+ WP++AS Sbjct: 11 LGSRKGLTPGLQHYTT--------VTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTPEVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPIAKEAAERWPKVAS 135
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_SULSO (50S ribosomal protein L14P OS=Sulfolobus solfataricus GN=rpl14p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29 Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 3 Query: 135 AVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIAS 467 +VVN ADN+G K MII VYG +G L ++P A++ D+VM S KKG PE+RK+ AVIVRQR +RR +G +I FEDNA VI+N G KG+ V GP+A+E A+ WP+IAS Sbjct: 22 SVVNVADNSGGKEAMIIGVYGYRGVLRRVPFANIADMVMVSIKKGTPEVRKQKFRAVIVRQRMPYRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIAS 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_META3 (50S ribosomal protein L14P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29 Identity = 64/123 (52.03%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIA 464 G + LP GA + CADNTGAK L II+V G KG +LP+ VG LV S KKG PE+RK+V PA+I+RQ+K +RR +G + FEDNA VIV +G KGS + GPVAKE A+ W ++ Sbjct: 3 GFGSKVIRSLPNGARLICADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPVAKEAAERWAGVS 125
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METVS (50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.046e-28 Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIA 464 GL LP GA + CADNTGAK L +I+V G + +LPSA VG +V S KKG PE+RK+V PA+I+RQ+K ++R +G + FEDNA VIV +G KGS + GPV+KE A+ WP ++ Sbjct: 3 GLGSTIVRSLPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVS 125
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METVA (50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.046e-28 Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIA 464 GL LP GA + CADNTGAK L +I+V G + +LPSA VG +V S KKG PE+RK+V PA+I+RQ+K ++R +G + FEDNA VIV +G KGS + GPV+KE A+ WP ++ Sbjct: 3 GLGSTIVRSLPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVS 125
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METJA (50S ribosomal protein L14P OS=Methanocaldococcus jannaschii GN=rpl14p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.046e-28 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 123 LPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIA 464 LPVGA CADNTGAK + II+V KG +LP+A VGD+V+ + KKG PE+RK+V PAV++RQRK RR +G + F DNA VIV G KGS + GPVAKE A+ WP IA Sbjct: 12 LPVGARCICADNTGAKEVEIIAVRNYKGVARRLPTARVGDMVIVTVKKGTPEMRKQVLPAVVIRQRKEIRRPDGTRVKFADNAVVIVTPDGNPKGSDIKGPVAKEAAERWPGIA 125
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METS5 (50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl14p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.366e-28 Identity = 59/110 (53.64%), Postives = 83/110 (75.45%), Query Frame = 3 Query: 138 VVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIAS 467 +VN +DN+GAK MIISV+G +G L ++P A+VGDLVM S +KG P++RK+ AV++RQR +RR +G +I F+DNA VIVN G KG+ + GPVA+E A+ WP++AS Sbjct: 23 MVNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQRMPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERWPKVAS 132 The following BLAST results are available for this feature:
BLAST of CX301033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301033 ID=CX301033; Name=CX301033; organism=Citrus sinensis; type=EST; length=663bpback to top |