CX301033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_ARCFU (50S ribosomal protein L14P OS=Archaeoglobus fulgidus GN=rpl14p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.366e-28 Identity = 63/121 (52.07%), Postives = 86/121 (71.07%), Query Frame = 3 Query: 123 LPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 LP GA + CADNTGA+ L II+V G KG + P+A VGD+V+ + KKG PE+RK+VH AVIVRQRK +RR +G + FEDNA VI N +GE +GS + G VA+E A+ + +I + + I+ Sbjct: 12 LPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQVHYAVIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAERFSKIGTIASVIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METMP (50S ribosomal protein L14P OS=Methanococcus maripaludis GN=rpl14p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIA 464 GL LP GA + CADNTGAK L +I+V G + +LP+ VG +V S KKG PE+RK+V PA+I+RQ+K +RR +G + FEDNA VIV +G KGS + GPV+KE A+ WP ++ Sbjct: 3 GLGSNIVRSLPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVS 125
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_IGNH4 (50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28 Identity = 60/120 (50.00%), Postives = 82/120 (68.33%), Query Frame = 3 Query: 108 RTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIAS 467 + GL VG+ V DN+GAK MII V G GRL ++P A VGD+V+ + KKG PE+R +V A++VRQRK +RR +G ++ FEDNA VIV+ G +GS + GPVA+E + WPRI + Sbjct: 12 KVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVKKGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAVERWPRIGN 131
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_PYRFU (50S ribosomal protein L14P OS=Pyrococcus furiosus GN=rpl14p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28 Identity = 66/138 (47.83%), Postives = 91/138 (65.94%), Query Frame = 3 Query: 75 KGRGGAVGLK-FRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 KG G G+ R T LPVGA + ADN+GAK + II V G +L SA VGD+V+A+ KKG+P++R +V AVI+RQRK +RR +G+ + FEDNA VIV +G +G+ + GPVA+E A+ W RI S + I+ Sbjct: 4 KGAGATRGVSAVRPTRALPVGAYLTVADNSGAKVIQIIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVRIGSIASIIV 141
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METM7 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl14p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.780e-28 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIA 464 GL LP GA + CADNTGAK L II+V G + +LP+ VG +V S KKG PE+RK+V PA+I+RQ+K ++R +G + FEDNA VIV +G KGS + GPV+KE A+ WP ++ Sbjct: 3 GLGSTIVRSLPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVS 125
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_PYRKO (50S ribosomal protein L14P OS=Pyrococcus kodakaraensis GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28 Identity = 62/138 (44.93%), Postives = 91/138 (65.94%), Query Frame = 3 Query: 75 KGRGGAVGLK-FRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 KG G G+ R T LP+GA + ADN+GAK + II V G KG +L +A VGD+V+A+ KKG+P++R +V AV+VRQRK +RR +G+ + FEDNA IV +G +G+ + G +A+E A+ W R+ S + +L Sbjct: 4 KGAGATRGISPVRPTRALPIGAYLKVADNSGAKVIQIIGVVGYKGTRRRLAAAGVGDMVVATVKKGRPDMRHQVVRAVVVRQRKEYRRLDGMRVKFEDNAAAIVTPEGVPRGTEIRGAIAREAAERWVRLGSIASIVL 141
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_PYRAB (50S ribosomal protein L14P OS=Pyrococcus abyssi GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28 Identity = 65/138 (47.10%), Postives = 91/138 (65.94%), Query Frame = 3 Query: 75 KGRGGAVGLK-FRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 KG G G+ R T +PVGA + ADN+GAK + +I V G +L SA VGD+V+A+ KKG+P++R +V AVI+RQRK +RR +G+ I FEDNA VIV +G +G+ + GPVA+E A+ W RI S + I+ Sbjct: 4 KGAGATRGITPVRPTRAIPVGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVRIGSIASIIV 141
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28 Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIA 464 GL LP GA + CADNTGAK L +I+V G + +LP+ VG +V S KKG PE+RK+V PA+I+RQ+K ++R +G + FEDNA VIV +G KGS + GPV+KE A+ WP ++ Sbjct: 3 GLGSTIVRSLPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVS 125
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_PYRHO (50S ribosomal protein L14P OS=Pyrococcus horikoshii GN=rpl14p PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.157e-27 Identity = 63/138 (45.65%), Postives = 91/138 (65.94%), Query Frame = 3 Query: 75 KGRGGAVGLK-FRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 KG G G+ R T +P+GA + ADN+GAK + +I V G +L SA VGD+V+A+ KKG+P++R +V AVI+RQRK +RR +G+ + FEDNA VIV +G +G+ + GPVA+E A+ W RI S + I+ Sbjct: 4 KGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAEKWVRIGSIASIIV 141
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METM5 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.157e-27 Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIA 464 GL LP GA + CADNTGAK L +I+V G + +LP+ VG +V S KKG PE+RK+V PA+I+RQ+K ++R +G + FEDNA VIV +G KGS + GPV+KE A+ WP ++ Sbjct: 3 GLGSTIVRSLPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVS 125 The following BLAST results are available for this feature:
BLAST of CX301033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301033 ID=CX301033; Name=CX301033; organism=Citrus sinensis; type=EST; length=663bpback to top |