CX301033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_MYCA5 (50S ribosomal protein L14 OS=Mycoplasma arthritidis (strain 158L3-1) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 42/104 (40.38%), Postives = 63/104 (60.58%), Query Frame = 3 Query: 144 NCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPE---LRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECAD 446 N ADN+GAK +MII G G + + S ++GD+V+ + KK P +V AVIVR ++ R+ G +I F+DNA V++ G ++G+ V GPVA+E D Sbjct: 9 NVADNSGAKEVMIIKNLG--GSIVR--STNIGDVVVVTVKKAIPHGFVKEGQVLKAVIVRTKRGLMRENGSHIRFDDNAVVLIKEDGTLRGTRVFGPVARELRD 108
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METPP (50S ribosomal protein L14 OS=Methylibium petroleiphilum (strain PM1) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKK---VHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 ++ ADNTGAKS+M I V G +K A +GD++ S K+ P R K V+ AV+VR K RR++G + F+ NA V++N K E G+ + GPV +E Sbjct: 8 LDVADNTGAKSVMCIKVLGG----SKRRYAGIGDVIKVSIKEAAPRGRVKKGEVYSAVVVRTAKGVRRQDGSLVKFDGNAAVLLNAKLEPIGTRIFGPVTRE 105
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_MAGSA (50S ribosomal protein L14 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKK---VHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 ++ ADN+GA+ + I V G R A+VGD+++ S K+ P R K VH AVIVR K RR +G I F+ NA V++N +GE G+ + GPV +E Sbjct: 8 LDVADNSGARRVQCIKVLGGSHRT----IATVGDVIVVSIKEAIPRGRVKKGDVHRAVIVRTAKEIRRADGSAIRFDTNAAVLINKQGEPIGTRIFGPVTRE 105
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_LACH4 (50S ribosomal protein L14 OS=Lactobacillus helveticus (strain DPC 4571) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 150 ADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPE---LRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 ADN+GA+ L++I V G +K + ++GD+V+ + K+ P + V AVIVR + RR++G YI F++NAGVI+N +G+ + GPVA+E Sbjct: 11 ADNSGARELLVIRVLGG----SKRKTGNIGDIVVCTVKQATPGGVVKKGDVVKAVIVRTKSGARREDGSYIKFDENAGVIINADKSPRGTRIFGPVARE 105
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_LACAC (50S ribosomal protein L14 OS=Lactobacillus acidophilus GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 150 ADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPE---LRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 ADN+GA+ L++I V G +K + ++GD+V+ + K+ P + V AVIVR + RR++G YI F++NAGVI+N +G+ + GPVA+E Sbjct: 11 ADNSGARELLVIRVLGG----SKRKTGNIGDIVVCTVKQATPGGVVKKGDVVKAVIVRTKSGARREDGSYIKFDENAGVIINADKSPRGTRIFGPVARE 105
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_GEOTN (50S ribosomal protein L14 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 150 ADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPE---LRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECAD 446 ADN+GA+ +++I V G GR A++GD+V+A+ K P + +V AV+VR ++ RR +G YI F++NA VI+ + +G+ + GPVA+E D Sbjct: 11 ADNSGAREVLVIKVLGGSGRRY----ANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRSDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELRD 108
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_EXIS2 (50S ribosomal protein L14 OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 37/99 (37.37%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 150 ADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPE---LRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 ADN+GA+ ++ I V G GR +A++GD+++ + K+ P + +V AV+VR ++ RRK+G YI F++NA VI+ + +G+ + GPVA+E Sbjct: 11 ADNSGAREVLTIKVLGGSGR----KTANIGDVIVCTVKQATPGGVVKKGEVVRAVVVRTKRGVRRKDGSYIRFDENAAVIIKDDKSPRGTRIFGPVARE 105
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_DESAD (50S ribosomal protein L14 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 3 Query: 123 LPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKK---VHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 + V + ++ ADN+GAK + I V G +K ASVGD+++ S K+ P + K V AV+VR +K R +G YI F++N+ V++NN + G+ + GPVA+E Sbjct: 2 IQVESKLDVADNSGAKKVSCIKVLGG----SKRRYASVGDIIVVSVKEAMPHSKVKKGAVMKAVVVRTKKEIGRPDGSYIKFDNNSAVLLNNSMDPVGTRIFGPVARE 105
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_DEIGD (50S ribosomal protein L14 OS=Deinococcus geothermalis (strain DSM 11300) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYG--------IKGRLNKLPSASVGDLVMASCKKGKPELRKK---VHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECAD 446 ++ ADN+GA+ LM I V KG A VGD+++AS K P K V AV+VR +R +G I F+ NA VI+NN+GE +G+ V GPVA+E D Sbjct: 8 LDVADNSGARELMCIRVLNSGIGGKGLTKGGGGNKRYAHVGDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHAIKRADGSTIRFDKNAAVIINNQGEPRGTRVFGPVARELRD 120
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_DECAR (50S ribosomal protein L14 OS=Dechloromonas aromatica (strain RCB) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKK---VHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 ++ ADNTGA+S+M I V G R A +GD++ S K P R K V+ AV+VR K RR +G + F+ NA V++NNK E G+ + GPV +E Sbjct: 8 LDVADNTGARSVMCIKVLGGSRRRY----AGIGDIIKVSIKDAAPRGRVKKGDVYNAVVVRTAKGVRRPDGSLVRFDGNAAVLLNNKLEPIGTRIFGPVTRE 105 The following BLAST results are available for this feature:
BLAST of CX301033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301033 ID=CX301033; Name=CX301033; organism=Citrus sinensis; type=EST; length=663bpback to top |