CX301033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_CAUSK (50S ribosomal protein L14 OS=Caulobacter sp. (strain K31) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 150 ADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKK---VHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 ADN+GA+ +M I V G GR ASVGD+++ S K+ P R K V AV+VR + +RK+G I F+ NA VIVN + E G+ + GPV +E Sbjct: 11 ADNSGARRVMCIKVLGGAGRRY----ASVGDVIVVSVKEAIPRGRVKKGDVLRAVVVRVNQGMKRKDGSLIRFDKNAAVIVNKQSEPVGTRIFGPVPRE 105
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_BIFAA (50S ribosomal protein L14 OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKK---VHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECAD 446 ++ ADNTGAK L+ I V G +K A +GD+++AS K P K V AV+VR K RR +G YI F++NA VI+ + E KG+ + GPV +E D Sbjct: 8 LHVADNTGAKELLAIRVLGG----SKRRYAGIGDVIVASVKDAIPGGSVKKGDVVKAVVVRTVKEHRRVDGSYIKFDENAAVILGSGREPKGTRIFGPVGRELRD 108
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_BIFA0 (50S ribosomal protein L14 OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKK---VHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECAD 446 ++ ADNTGAK L+ I V G +K A +GD+++AS K P K V AV+VR K RR +G YI F++NA VI+ + E KG+ + GPV +E D Sbjct: 8 LHVADNTGAKELLAIRVLGG----SKRRYAGIGDVIVASVKDAIPGGSVKKGDVVKAVVVRTVKERRRADGSYIKFDENAAVILGSGREPKGTRIFGPVGRELRD 108
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_BACST (50S ribosomal protein L14 OS=Bacillus stearothermophilus GN=rplN PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 150 ADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPE---LRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECAD 446 ADN+GA+ +++I V G GR A++GD+V+A+ K P + +V AV+VR ++ RR +G YI F++NA VI+ + +G+ + GPVA+E D Sbjct: 11 ADNSGAREVLVIKVLGGSGRRY----ANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELRD 108
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_BACSK (50S ribosomal protein L14 OS=Bacillus clausii (strain KSM-K16) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 150 ADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPE---LRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECAD 446 ADN+GA+ ++ I V G GR A++GD+++ S K+ P + V AVIVR + RR +G YI F++NA VIV + +G+ + GPVA+E D Sbjct: 11 ADNSGAREVLCIKVLGGSGR----KIANIGDVIVCSVKEATPGGVVKKGDVVKAVIVRSKSGVRRNDGSYIKFDENAAVIVRDDKSPRGTRIFGPVARELRD 108
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_AGRT5 (50S ribosomal protein L14 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKK---VHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 ++ ADN+GA+ +M I V G +K ASVGD+++ S K+ P R K V AV+VR K RR +G I F++NA V+++NK E G+ + GPV +E Sbjct: 8 LDVADNSGARRVMCIKVLGG----SKRKYASVGDIIVVSIKEAIPRGRVKKGDVMKAVVVRTAKDIRRADGSVIRFDNNAAVLIDNKKEPIGTRIFGPVPRE 105
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RK14_VITVI (50S ribosomal protein L14, chloroplastic OS=Vitis vinifera GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPEL---RKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADL-WPRIASNSGSIL 485 +N ADN+GA+ LM I + G R A +GD+++A K+ P + R +V AVIVR K +R G+ I ++DNA VI++ +G KG+ + G + +E L + +I S + +L Sbjct: 8 LNVADNSGARELMCIRIIGTSNRRY----AHIGDVIVAVIKEVVPNMPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIVRELRQLNFTKIVSLAPEVL 122
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RK14_HUPLU (50S ribosomal protein L14, chloroplastic OS=Huperzia lucidula GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 41/119 (34.45%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPEL---RKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADL-WPRIASNSGSIL 485 +N ADN+GAK M I + R A+ G++++A K+ P + + ++ AV+VR K +R G+ I F+DNA VI+N +G +G+ V GPVA+E + + +I S + +L Sbjct: 8 LNVADNSGAKKPMCIRILKASNR----KYANTGNVIVAVVKEAVPNMPLRKSEIVRAVVVRTCKELKRNNGMIIQFDDNAAVIINQEGNPRGTRVFGPVARESREFNFTKIVSLAPEVL 122
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RK14_GUIAB (50S ribosomal protein L14, chloroplastic OS=Guizotia abyssinica GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPEL---RKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKE 437 +N ADN+GA+ LM I + G R A +GD+++A K P + R +V AVIVR K +R G+ I ++DNA V+++ +G KG+ V G +A+E Sbjct: 8 LNVADNSGARELMCIRIIGASHRRY----AHIGDVIVAVIKDAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARE 105
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RK14_CUSOB (50S ribosomal protein L14, plastid OS=Cuscuta obtusiflora GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 141 VNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPEL---RKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADL 449 +N ADN+GA+++M I + G R A +GD+++A K P + + +V AVIVR RK +R G+ + ++DNA VI++ +G KG+ + G + +E L Sbjct: 8 LNVADNSGARTIMCIRIIGSSNRRY----AHIGDIIVAVIKDAVPNMTLEKSEVVRAVIVRTRKELKRDNGIILRYDDNAAVIIDKEGNPKGTRIFGAIPRELRKL 109 The following BLAST results are available for this feature:
BLAST of CX301033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301033 ID=CX301033; Name=CX301033; organism=Citrus sinensis; type=EST; length=663bpback to top |