CX301033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METTP (50S ribosomal protein L14P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27 Identity = 59/130 (45.38%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 G K + + G + CADNTGA++L ++SV +G N+ P A +GD+V+ S KKG PE+RK++ AVI+RQ+K +RR +GL + FEDNA VI ++ G KGS + GPVA+E A+ + +IAS++ I+ Sbjct: 3 GNKAKIPRSINTGTYLECADNTGARTLFVVSVKKYRGVKNRQPCAGIGDMVVVSVKKGTPEMRKQIFNAVIIRQKKEFRRPDGLRVKFEDNAAVITDDAGVPKGSEIKGPVAREVAERFGKIASSAAIIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METBU (50S ribosomal protein L14P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27 Identity = 58/130 (44.62%), Postives = 90/130 (69.23%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 G++ + L GA + C DNTGA+++ IISV +G N++P +GD+ + S KKG PE+RK++ AVIVRQ+K +RR +G+ + FEDNA VIV++KG KG+ + GPVA+E A+ +P+I + + I+ Sbjct: 3 GIRSKIPRALNAGAKIECVDNTGARTVEIISVKKYRGVKNRMPKGGIGDMCVVSVKKGTPEMRKQILYAVIVRQKKEFRRPDGIRVAFEDNAVVIVDDKGIPKGTDIKGPVAREAAERFPKIGTTASMIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_SULAC (50S ribosomal protein L14P OS=Sulfolobus acidocaldarius GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27 Identity = 60/118 (50.85%), Postives = 82/118 (69.49%), Query Frame = 3 Query: 114 TLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIAS 467 T L + V ADN+GAK +II +YG +G L ++P A++ DLVM S +KG P++RK+ AVIVRQR +RR +G +I FEDNA VI+N G KG+ V GP+A+E A+ WP+IAS Sbjct: 15 TPALQHNSSVVVADNSGAKEAVIIGIYGYRGVLRRVPFANIADLVMVSVRKGSPDVRKQKFKAVIVRQRMPFRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIAS 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_HALSA (50S ribosomal protein L14P OS=Halobacterium salinarium GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27 Identity = 59/129 (45.74%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 99 LKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 +K T GL G+++ CADNTGA+ L I SV G +GR N+ P A +GD + S KG PE+R++V AV+VRQRK RR +G + FEDNA VI+++ GE +G+ + GP+++E A+ + IAS + I+ Sbjct: 4 IKADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTATMIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_HALS3 (50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27 Identity = 59/129 (45.74%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 99 LKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 +K T GL G+++ CADNTGA+ L I SV G +GR N+ P A +GD + S KG PE+R++V AV+VRQRK RR +G + FEDNA VI+++ GE +G+ + GP+++E A+ + IAS + I+ Sbjct: 4 IKADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTATMIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_CALMQ (50S ribosomal protein L14P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.497e-27 Identity = 63/141 (44.68%), Postives = 95/141 (67.38%), Query Frame = 3 Query: 81 RGG----AVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYG--IKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 RGG V +F T G+ + ++VN ADN+GAK + +I V G K ++P SVGD+V+ S ++GKPE+RK++ A++VRQR+ +RR +G ++ FEDNA VIV +G++KG+ V GPVA E A WP++AS + I+ Sbjct: 4 RGGPRTVGVPWRFHLTPGIFMNSLVNVADNSGAKVVKVIGVVGHYSKNVHRRIPGVSVGDMVVVSVQEGKPEMRKQILRAIVVRQRRPFRRPDGTWVAFEDNAVVIVTEEGQVKGTEVHGPVAMEAAQRWPQVASIATMII 144
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_HALWD (50S ribosomal protein L14P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl14p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.279e-26 Identity = 62/129 (48.06%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 99 LKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 LK T GL G++V CADNTGA+ L +ISV G G N+ P A +GD V S KG PE+R++V AVIVRQRK+ RR +G + FEDNA VI++ E +G+ + GP+A+E A+ + IAS + I+ Sbjct: 4 LKADVTKGLERGSLVTCADNTGARELKVISVMGSSGTKNRHPKAGIGDQVTVSVTKGTPEMRRQVLEAVIVRQRKSIRRPDGTRVKFEDNAAVIIDEMEEPRGTEIKGPIAREVAERFGSIASTATMIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_HALLT (50S ribosomal protein L14P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl14p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.849e-26 Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 99 LKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 LK T GL G+++ CADNTGA+ L +ISV G G N+ P A +GD V S KG PE+R++V AV+VRQRK RR G + FEDNA VI+++ E +G+ + GPVA+E A+ + IAS + I+ Sbjct: 4 LKADVTQGLSKGSLITCADNTGARELKVISVAGYSGTKNRHPKAGIGDKVTVSVTKGTPEMRRQVLEAVVVRQRKPIRRPNGTRVKFEDNAAVIIDDLDEPRGTEIKGPVAREVAERFGSIASTATMIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_NITMS (50S ribosomal protein L14P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26 Identity = 65/143 (45.45%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 63 KEMGKGRGGAVGLKFR--TTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 K+ GKG +FR T +PVGA + CADN+GAK L +I+V + R ++LPSASVGD KKG ELRK+V+ AVI+RQ+ RR G+ + FEDNA V++ +GE KG+ + GPVA E ++ WPR+A+ + ++ Sbjct: 3 KQAGKGVE-----EFRPYVTKVIPVGANIVCADNSGAKILEVINVPRHRTRASRLPSASVGDFCNVVVKKGPAELRKQVYGAVIIRQKYPVRRLNGVRVCFEDNAAVLITPEGETKGTDIKGPVAAEASEKWPRVANLASMVV 140
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METAC (50S ribosomal protein L14P OS=Methanosarcina acetivorans GN=rpl14p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26 Identity = 58/130 (44.62%), Postives = 88/130 (67.69%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 G++ L GA + C DNTGAK + IISV +G N++P A +GD+ + S KKG PE+RK+V AV+VRQ++ +RR +GL++ FEDNA VI + +G KG+ + GPVA+E A+ +P+I + + I+ Sbjct: 3 GMRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132 The following BLAST results are available for this feature:
BLAST of CX301033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301033 ID=CX301033; Name=CX301033; organism=Citrus sinensis; type=EST; length=663bpback to top |