CX301033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METMA (50S ribosomal protein L14P OS=Methanosarcina mazei GN=rpl14p PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25 Identity = 57/130 (43.85%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 G++ L GA + C DNTGAK + IISV +G N++P A +GD+ + S KKG PE+RK++ AV+VRQ++ +RR +GL++ FEDNA VI + G KG+ + GPVA+E A+ +P+I + + I+ Sbjct: 3 GIRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEDGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METBF (50S ribosomal protein L14P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl14p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25 Identity = 58/130 (44.62%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 G++ L GA V C DNTGAK + IISV +G N++P A +GD+ + S KKG PE+RK+V AV+VRQ++ +RR +GL + FEDNA VI + +G KG+ + GP+A+E A+ +P+I + + I+ Sbjct: 3 GIRSNIPRALNAGAKVPCVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLRVSFEDNAMVITDEEGIPKGTDIKGPIAREVAERYPKIGTTASIIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_THEPD (50S ribosomal protein L14P OS=Thermofilum pendens (strain Hrk 5) GN=rpl14p PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25 Identity = 59/141 (41.84%), Postives = 93/141 (65.96%), Query Frame = 3 Query: 69 MGKGRGGAVGLKFRTTL--GLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 M K VG+ +R L G+ + ++V ADN+GA +I V K ++P A+VGD+V+ S + GKPELRK+V A+++RQR+ +RR +G +I FEDNA VI+ +GE KG+ + GP+AKE A+ WP++++ + I+ Sbjct: 1 MAKRGPKTVGVSYRLGLTPGVFMESLVKVADNSGATLAKVIGVPHYKAVWRRIPGAAVGDIVIVSIRAGKPELRKQVMRAIVIRQRRPYRRPDGSWIAFEDNAVVIITPEGEPKGTEIRGPLAKEAAERWPKLSAMASIIV 141
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_HALMA (50S ribosomal protein L14P OS=Haloarcula marismortui GN=rpl14p PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25 Identity = 56/124 (45.16%), Postives = 82/124 (66.13%), Query Frame = 3 Query: 114 TLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 T GL G+++ CADNTGA+ L +ISV+G G N+ P A +GD + S KG PE+R++V AV+VRQRK RR +G + FEDNA VIV+ + +G+ + GP+A+E A + +AS + I+ Sbjct: 9 TQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METB6 (50S ribosomal protein L14P OS=Methanoregula boonei (strain 6A8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.197e-24 Identity = 52/120 (43.33%), Postives = 79/120 (65.83%), Query Frame = 3 Query: 108 RTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIAS 467 +T L G + CADNTGA+ + I+SV+G G + P +GD+ + KKG P++RKK+ AV++RQ+K RR GL + F+DNA V+V+ K E KG+ + GPVA+E A+ +P++ S Sbjct: 7 KTPRALATGTKLTCADNTGARIVQIVSVFGYHGVRRRQPKMGLGDIATVTVKKGTPDMRKKLVRAVVIRQKKEMRRPNGLRVSFDDNAVVVVDEKNEPKGTEIKGPVAREVAERYPKLGS 126
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_METLZ (50S ribosomal protein L14P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.042e-24 Identity = 52/130 (40.00%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 96 GLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 GL + L G+ + CADNTGA+ + I+SV+G G N+ P +GDL + KKG P++++K+ AV+VRQ+K +RR GL + FE+NA +++N G+ +G+ + GPVA+E A+ +P++ S + I+ Sbjct: 3 GLTSKIPRALQTGSKMVCADNTGARVVQIVSVFGYHGVKNRQPKMGLGDLATVTVKKGTPDMKRKLVRAVVVRQKKEFRRPNGLRVSFEENAMILLNENGDPRGTDIKGPVAREVAERFPKVGSMATIII 132
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_PYRCJ (50S ribosomal protein L14P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 3 Query: 81 RGG----AVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYG--IKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIAS 467 RGG V +F T G+ + ++V ADN+GAK + +I V G K ++P A VGD+V+ ++GKPELRK++ A++VRQR+ +RR +G ++ FEDNA VIV +G+ KGS + GPVA E WP IA+ Sbjct: 4 RGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKSVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIAN 138
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_PYRIL (50S ribosomal protein L14P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl14p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.482e-24 Identity = 61/141 (43.26%), Postives = 90/141 (63.83%), Query Frame = 3 Query: 81 RGG----AVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRL--NKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 RGG V +F T G+ + ++V ADN+GA+ + +I V G + ++P A VGD+V+ ++GKPELRK++ A++VRQR+ +RR +G ++ FEDNA VIV +G+ KGS + GPVA E WP IA N SI+ Sbjct: 4 RGGKRTVGVSYRFHVTPGIFLNSLVPVADNSGARLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIA-NLASII 143
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_PYRAE (50S ribosomal protein L14P OS=Pyrobaculum aerophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.482e-24 Identity = 59/135 (43.70%), Postives = 87/135 (64.44%), Query Frame = 3 Query: 81 RGG----AVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRL--NKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIAS 467 RGG V +F T G+ + ++V ADN+GAK + +I V G + ++P A VGD+V+ ++GKPELRK++ A++VRQR+ +RR +G ++ FEDNA VIV +G+ KGS + GPVA E WP IA+ Sbjct: 4 RGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIAN 138
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL14_NATPD (50S ribosomal protein L14P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl14p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24 Identity = 54/124 (43.55%), Postives = 81/124 (65.32%), Query Frame = 3 Query: 114 TLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 T GL G+++ CADNTGA+ L + S+ G G N+ P A +GD + S KG PE+R++V AV++RQRK RR +G + FEDNA VIV+ + +G+ + GP+A+E A+ + IAS + I+ Sbjct: 9 TQGLEKGSLITCADNTGARELKVTSISGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVIRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAERFGSIASTATIIV 132 The following BLAST results are available for this feature:
BLAST of CX301033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301033 ID=CX301033; Name=CX301033; organism=Citrus sinensis; type=EST; length=663bpback to top |