CX301031
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17 Identity = 60/185 (32.43%), Postives = 91/185 (49.19%), Query Frame = 2 Query: 20 EGALAEENMRGICFEVCDV-VLHADAIHRG------------GGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQL-----VAD-----------IRKRKGL 487 EG LA E ++G+C V V + D I G++I + R I+ + L PR++ +Y +IQ LG +Y+V+ Q+ G + E + GTP + I+A++PV+E+FG S +R TSG A PQ VF ++ + DP T +L AD IR+RKGL Sbjct: 907 EGPLANEPVQGMCVLVESVHKMSQDEIESIEDPRYQQHIVDLSGRLITSTRDAIHEAFLDWSPRIMWAIYSCDIQTSVDVLGKVYAVILQRHGKIISEEMKEGTPFFQIEAHVPVVEAFGLSEDIRKRTSGAAQPQLVFSGFECIDLDPFWVPTTEEELEELGDTADRENIARKHMNAIRRRKGL 1091
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_THEGJ (Elongation factor 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fusA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17 Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 20 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGL 487 EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + LNQ+RG + +M++ G + I PV E FGF+G +R ATSG+A +H + P A Q++ IR+RKGL Sbjct: 571 EGPLAKEPVMKVIVRLHDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSRELNQRRGQLI-DMRQEGEVMI-IIGEAPVAEMFGFAGAIRGATSGKAL--WTTEH----AGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17 Identity = 47/159 (29.56%), Postives = 83/159 (52.20%), Query Frame = 2 Query: 23 GALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGLKEQ 496 G +A+E + G+ ++ D +H DA+HRG QV+P R+ I+ + ++A+P LLEP+ V I P+ +G + +RG + Q + +++ +PV E FGF+G +R+AT G+ W ++ P + ++R RKGL + Sbjct: 572 GPVAKEKVMGVKIKLMDAKIHEDAVHRGPAQVLPAIRKGIFGAMMSAEPVLLEPIQKVFINVPQDYMGSATREIQNRRGQIVNMTQE--GDMVTVESTVPVAEMFGFAGDIRSATEGRCL-------WSTENAGFERLPNELQHTITREVRTRKGLSPE 721
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_THEON (Elongation factor 2 OS=Thermococcus onnurineus (strain NA1) GN=fusA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16 Identity = 54/157 (34.39%), Postives = 81/157 (51.59%), Query Frame = 2 Query: 20 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 487 EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + +NQ+RG + +M++ G + I + PV E FGF+G LR ATSG+A W + P A ++ IR+RKGL Sbjct: 571 EGPLAKEPVMKVMVRLHDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGSVSREINQRRGQLI-DMRQEGEVMI-IISEAPVAEMFGFAGALRGATSGKAL-------WSTEHAGFKRVPNELAVNIIRQIRQRKGL 718
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16 Identity = 53/157 (33.76%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 20 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 487 EG LA E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + + Q+RG + +M++ G + I A PV E FGF+G++R+ATSG+A W + P A Q++ IR+RKGL Sbjct: 571 EGPLAREPVMKVIVRLLDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMFGFAGSIRSATSGRAL-------WSTEHAGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16 Identity = 53/157 (33.76%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 20 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 487 EG LA+E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + + Q+RG + +M++ G + I A PV E FGF+G +R+ATSG+A W + P A Q++ IR+RKGL Sbjct: 571 EGPLAKEPVMKVIVRLIDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMFGFAGAIRSATSGRAL-------WSTEHAGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.925e-16 Identity = 55/161 (34.16%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQM 499 ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E GFS +R+AT G+A + +M +D L+ +++ +IR+RKG+K ++ Sbjct: 569 EDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDEMIGFSSDIRSATEGRASWNTENAGFRVM-ADNLQ-----REIIMEIRERKGMKTEL 721
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.925e-16 Identity = 55/161 (34.16%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQM 499 ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E GFS +R+AT G+A + +M +D L+ +++ +IR+RKG+K ++ Sbjct: 569 EDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDEMIGFSSDIRSATEGRASWNTENAGFRVM-ADNLQ-----REIIMEIRERKGMKTEL 721
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.514e-16 Identity = 52/157 (33.12%), Postives = 80/157 (50.96%), Query Frame = 2 Query: 20 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 487 EG LA E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + +NQ+RG + +M++ G + I + PV E FGF+G +R ATSG+A W + P A ++ IR+RKGL Sbjct: 571 EGPLAREPVMKVIVRLVDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVVINVPYEYMGSVSREMNQRRGQLI-DMRQEGEVMI-IISEAPVAEMFGFAGAIRGATSGRAL-------WSTEHAGFKRVPTELAINIIRQIRQRKGL 718
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: SN114_YEAST (114 kDa U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae GN=SNU114 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15 Identity = 56/173 (32.37%), Postives = 90/173 (52.02%), Query Frame = 2 Query: 17 KEGALAEENMRGICFEVCDVVLHADA-IHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRG-HVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDH--W-----DMMSSDPLEPGTQAAQL-------VADIRKRKGL 487 KEG LAEE + G+ +++ + + +D I Q+IP ++ Y LTA P LLEP+Y V+I L + ++ ++RG +++ ++ GTPL ++ +PVIES GF LR +T+G Q F H W D++ D P + A + V R+RKG+ Sbjct: 804 KEGPLAEEPIYGVQYKLLSISVPSDVNIDVMKSQIIPLMKKACYVGLLTAIPILLEPIYEVDITVHAPLLPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMCQLYFWHKIWRKVPGDVLDKDAFIPKLKPAPINSLSRDFVMKTRRRKGI 976 The following BLAST results are available for this feature:
BLAST of CX301031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301031 ID=CX301031; Name=CX301031; organism=Citrus sinensis; type=EST; length=741bpback to top |