CX301030

Overview
NameCX301030
Unique NameCX301030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_BOVIN (Cytoplasmic aconitate hydratase OS=Bos taurus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 7.388e-67
Identity = 122/174 (70.11%), Postives = 149/174 (85.63%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLP 557
            LLN GDS+TTDHISPAG+I ++SPAA+YL  RG+  ++FNSYGSRRGND +MARGTFANIR++NK LN +  P+T+H+P+GE L VFDAA RY+ AG   IVLAG EYGSGSSRDWAAKGP LLG++AV+A+S+ERIHRSNLVGMG+IPL + PGE+A TLGL G ERYTI++P
Sbjct:  668 LLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAIMARGTFANIRLLNKFLNKQA-PQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGSGSSRDWAAKGPFLLGIRAVLAESYERIHRSNLVGMGVIPLEYLPGENADTLGLTGRERYTISIP 840          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_RAT (Cytoplasmic aconitate hydratase OS=Rattus norvegicus GN=Aco1 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 8.168e-66
Identity = 122/174 (70.11%), Postives = 146/174 (83.91%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLP 557
            LLN GDS+TTDHISPAG+I ++SPAA+YL  RG+  +DFNSYGSRRGND +MARGTFANIR++NK LN +  P+TVH+P+GE L VFDAA RY+ AG   IVLAG EYGSGSSRDWAAKGP LLG+KAV+A+S+ER H SNLVGMG+IPL + PGE A +LGL G ERYTI++P
Sbjct:  668 LLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPRDFNSYGSRRGNDAIMARGTFANIRLLNKFLNKQA-PQTVHLPSGETLDVFDAAERYQQAGLPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERTHCSNLVGMGVIPLEYLPGETADSLGLTGRERYTIHIP 840          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_HUMAN (Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 1.067e-65
Identity = 121/177 (68.36%), Postives = 148/177 (83.62%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKV 566
            LLN GDS+TTDHISPAG+I ++SPAA+YL  RG+  ++FNSYGSRRGND VMARGTFANIR++N+ LN +  P+T+H+P+GE L VFDAA RY+ AG   IVLAG EYG+GSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL + PGE+A  LGL G ERYTI +P  +
Sbjct:  668 LLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLNKQA-PQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPENL 843          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_DICDI (Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 6.915e-65
Identity = 121/181 (66.85%), Postives = 148/181 (81.77%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVSEIR 578
            LLN GDSITTDHISPAG+I++ S AA+YL  +GV  +DFN+YGSRRGNDE+M RGTFAN RIVNKL    VGP+T ++PTGE +++ DAA +Y++ GH+ IVLAG++YGSGSSRDWAAKGP L G+K VIA SFERIHRSNLVGMGIIPL F+PG++A TLGL G E++ I LP   S I+
Sbjct:  670 LLNLGDSITTDHISPAGNINRKSSAARYLESKGVKPEDFNTYGSRRGNDEIMVRGTFANTRIVNKLAPA-VGPQTTYVPTGELMFISDAAEKYQSEGHQLIVLAGSDYGSGSSRDWAAKGPYLQGIKCVIAISFERIHRSNLVGMGIIPLQFQPGQNASTLGLTGKEQFNIELPTDKSLIK 849          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_CAEEL (Probable cytoplasmic aconitate hydratase OS=Caenorhabditis elegans GN=aco-1 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 6.915e-65
Identity = 119/175 (68.00%), Postives = 148/175 (84.57%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPN 560
            LLN GDS+TTDHISPAGSI K SPAA++L  RGV  +DFN+YG+RRGNDE+MARGTFANIR+VNKL + +VGP T+H+P+GE+L +FDAA +YK AG   I+LAG EYG GSSRDWAAKGP L GVKAVIA+SFERIHRSNL+GMGIIP  ++ G++A +LGL G E+++I +P+
Sbjct:  666 LLNLGDSVTTDHISPAGSISKTSPAARFLAGRGVTPRDFNTYGARRGNDEIMARGTFANIRLVNKLAS-KVGPITLHVPSGEELDIFDAAQKYKDAGIPAIILAGKEYGCGSSRDWAAKGPFLQGVKAVIAESFERIHRSNLIGMGIIPFQYQAGQNADSLGLTGKEQFSIGVPD 839          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON1_PSEAE (Aconitate hydratase 1 OS=Pseudomonas aeruginosa GN=acnA PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 6.697e-60
Identity = 111/163 (68.10%), Postives = 134/163 (82.21%), Query Frame = 3
Query:   48 GDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHE 536
            GDS+TTDHISPAG+I  DSPA +YL E GV+ KDFNSYGSRRGN EVM RGTFANIRI N++L GE G  T+++P+GEKL ++DAAMRY+  G   +++AG EYG+GSSRDWAAKG  LLGVKAVIA+SFERIHRSNLVGMG++PL F+ G+D  +L L G E
Sbjct:  688 GDSVTTDHISPAGNIKADSPAGRYLREHGVEPKDFNSYGSRRGNHEVMMRGTFANIRIKNEMLGGEEGGNTLYVPSGEKLAIYDAAMRYQEDGTPLVIVAGKEYGTGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVLPLQFENGQDRKSLKLTGKE 850          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_LEGPH (Aconitate hydratase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=acn PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 7.405e-59
Identity = 112/175 (64.00%), Postives = 135/175 (77.14%), Query Frame = 3
Query:   45 FGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVS 569
            FGDSITTDHISPAGSI   SPA  YL  +GVD KDFNSYGSRRGN EVM RGTFANIRI N++  G+ G  T ++PTGE + ++DAAMRY+    + +++AG EYG+GSSRDWAAKG  LLGVKAVI +SFERIHRSNL+GMGI+PL FK G    TL L G ER +I + +K++
Sbjct:  668 FGDSITTDHISPAGSIKASSPAGLYLKSKGVDEKDFNSYGSRRGNHEVMMRGTFANIRIRNEMTPGQEGGVTRYVPTGETMSIYDAAMRYQENQQDLVIIAGKEYGTGSSRDWAAKGTNLLGVKAVITESFERIHRSNLIGMGILPLQFKEGTTRKTLKLDGSERISIEISDKLT 842          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: IREB2_HUMAN (Iron-responsive element-binding protein 2 OS=Homo sapiens GN=IREB2 PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 1.396e-57
Identity = 106/178 (59.55%), Postives = 141/178 (79.21%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVS 569
            LL  GDS+TTDHISPAGSI ++S AAKYL  RG+  ++FNSYG+RRGND VM RGTFANI++ NK + G+  PKT+H P+G+ L VF+AA  Y+  G   I+LAG +YGSG+SRDWAAKGP LLGVKAV+A+S+E+IH+ +L+G+GI PL F PGE+A +LGL+G E +++  P ++S
Sbjct:  743 LLYLGDSVTTDHISPAGSIARNSAAAKYLTNRGLTPREFNSYGARRGNDAVMTRGTFANIKLFNKFI-GKPAPKTIHFPSGQTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHKDHLIGIGIAPLQFLPGENADSLGLSGRETFSLTFPEELS 919          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: IREB2_PIG (Iron-responsive element-binding protein 2 OS=Sus scrofa GN=IREB2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.824e-57
Identity = 106/178 (59.55%), Postives = 140/178 (78.65%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVS 569
            LL  GDS+TTDHISPAGSI + S AAKYL  RG+  ++FNSYG+RRGND VM RGTFANI++ NK + G+  PKT+H P+G+ L VF+AA  Y+  G   I+LAG +YGSG+SRDWAAKGP LLGVKAV+A+S+E+IH+ +L+G+GI PL F PGE+A +LGL+G E +++  P ++S
Sbjct:  744 LLYLGDSVTTDHISPAGSIARSSAAAKYLTNRGLTPREFNSYGARRGNDAVMTRGTFANIKLFNKFI-GKPAPKTIHFPSGQTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHKDHLIGIGIAPLQFLPGENADSLGLSGRETFSLTFPEELS 920          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: IREB2_CHICK (Iron-responsive element-binding protein 2 OS=Gallus gallus GN=IREB2 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.382e-57
Identity = 106/178 (59.55%), Postives = 140/178 (78.65%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVS 569
            LL  GDS+TTDHISPAGSI + S AAKYL  +G+  ++FNSYG+RRGND VM RGTFANI+++NK + G+  PKT+H P+G+ L VF+AA  Y+  G   I+LAG +YG GSSRDWAAKGP LLGVKAV+A+S+E++H+S L+G+GI PL F PGE+ +TLGL G E+++I  P ++S
Sbjct:  745 LLYLGDSVTTDHISPAGSIARSSAAAKYLTNKGLTPREFNSYGARRGNDAVMTRGTFANIKLLNKFI-GKPAPKTIHFPSGQTLDVFEAAELYQKEGIPVIILAGKKYGLGSSRDWAAKGPFLLGVKAVLAESYEKVHKSQLIGIGIAPLQFLPGENPNTLGLTGREQFSILFPPELS 921          
The following BLAST results are available for this feature:
BLAST of CX301030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ACOC_BOVIN7.388e-6770.11Cytoplasmic aconitate hydratase OS=Bos taurus GN=A... [more]
ACOC_RAT8.168e-6670.11Cytoplasmic aconitate hydratase OS=Rattus norvegic... [more]
ACOC_HUMAN1.067e-6568.36Cytoplasmic aconitate hydratase OS=Homo sapiens GN... [more]
ACOC_DICDI6.915e-6566.85Probable cytoplasmic aconitate hydratase OS=Dictyo... [more]
ACOC_CAEEL6.915e-6568.00Probable cytoplasmic aconitate hydratase OS=Caenor... [more]
ACON1_PSEAE6.697e-6068.10Aconitate hydratase 1 OS=Pseudomonas aeruginosa GN... [more]
ACON_LEGPH7.405e-5964.00Aconitate hydratase OS=Legionella pneumophila subs... [more]
IREB2_HUMAN1.396e-5759.55Iron-responsive element-binding protein 2 OS=Homo ... [more]
IREB2_PIG1.824e-5759.55Iron-responsive element-binding protein 2 OS=Sus s... [more]
IREB2_CHICK2.382e-5759.55Iron-responsive element-binding protein 2 OS=Gallu... [more]

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Properties
Property NameValue
Genbank descriptionC08005A01SK PhyRootSw1 Citrus sinensis cDNA clone C08005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301030 ID=CX301030; Name=CX301030; organism=Citrus sinensis; type=EST; length=580bp
CTCGTGCCGCCTCGTGCCGAATTCGGCACGAGGGCTTGCTCAATTTTGGT
GACAGTATTACTACCGATCACATCTCTCCGGCAGGAAGTATCCACAAGGA
CAGCCCTGCTGCAAAATATCTGCTTGAGCGTGGGGTGGATCGCAAGGACT
TCAATTCTTATGGTAGTCGTAGGGGTAATGATGAAGTGATGGCAAGGGGT
ACCTTTGCCAATATTCGCATTGTTAACAAGCTCTTGAATGGAGAAGTTGG
CCCAAAAACAGTTCATATTCCAACAGGAGAGAAGCTTTATGTTTTTGATG
CAGCAATGAGGTACAAGGCTGCTGGCCATGAGACCATTGTCCTAGCTGGA
GCAGAGTATGGAAGTGGCAGTTCTCGTGATTGGGCTGCTAAGGGTCCAAT
GCTTCTGGGTGTGAAAGCGGTGATTGCCAAGAGCTTTGAGAGAATTCATC
GTAGTAATCTTGTTGGTATGGGCATCATTCCTCTTTGCTTCAAGCCTGGG
GAGGATGCACACACACTGGGGTTAGCTGGTCATGAGCGCTACACAATCAA
CTTACCAAATAAAGTCAGTGAGATAAGGCC
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