CX301030

Overview
NameCX301030
Unique NameCX301030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON1_ECOLI (Aconitate hydratase 1 OS=Escherichia coli (strain K12) GN=acnA PE=1 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 2.382e-57
Identity = 111/171 (64.91%), Postives = 129/171 (75.44%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            L   GDS+TTDHISPAGSI  DSPA +YL  RGV+RKDFNSYGSRRGN EVM RGTFANIRI N+++ G  G  T H+P  + + ++DAAMRYK       V+AG EYGSGSSRDWAAKGP LLG++ VIA+SFERIHRSNL+GMGI+PL F  G    TLGL G E+  I
Sbjct:  665 LAMLGDSVTTDHISPAGSIKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGMTRHLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEKIDI 835          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: IREB2_XENLA (Iron-responsive element-binding protein 2 OS=Xenopus laevis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.111e-57
Identity = 104/174 (59.77%), Postives = 142/174 (81.61%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLP 557
            LL  GDS+TTDH+SPAGSI + SPAAKYL+++ +  ++FNSYG+RRGND VM RGTFAN+++ NKL+ G+ GPKT+H+P+G+ + VFDAA  Y+ +    I++AG +YG G+SRDWAAKGP LLGV+ VIA+S+E+IH+ +LVGMGI PL F  GE+A TLGL+G E+Y+++LP
Sbjct:  735 LLYLGDSVTTDHMSPAGSIPRTSPAAKYLMQKNLVPREFNSYGARRGNDAVMTRGTFANMKLFNKLV-GKTGPKTIHLPSGQTMDVFDAAELYQRSEIPLIIIAGKKYGLGNSRDWAAKGPFLLGVRVVIAESYEKIHKDHLVGMGIAPLQFLSGENAETLGLSGKEQYSLSLP 907          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: IREB2_RAT (Iron-responsive element-binding protein 2 OS=Rattus norvegicus GN=Ireb2 PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 9.052e-57
Identity = 105/177 (59.32%), Postives = 140/177 (79.10%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKV 566
            LL  GDS+TTDHISPAGSI + S AAKYL  RG+  ++FNSYG+RRGND VM RGTFANI++ NK + G+  PKT+H P+G+ L VF+AA  Y+  G   I+LAG +YGSG+SRDWAAKGP LLGVKAV+A+S+E+IH+ +L+G+GI PL F PGE+A +LGL+G E ++++ P ++
Sbjct:  743 LLYLGDSVTTDHISPAGSIARSSAAAKYLTNRGLTPREFNSYGARRGNDAVMTRGTFANIKLFNKFI-GKPAPKTIHFPSGQTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHKDHLIGIGIAPLEFLPGENADSLGLSGREVFSLSFPEEL 918          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: IREB2_MOUSE (Iron-responsive element-binding protein 2 OS=Mus musculus GN=Ireb2 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.052e-57
Identity = 105/177 (59.32%), Postives = 140/177 (79.10%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKV 566
            LL  GDS+TTDHISPAGSI + S AAKYL  RG+  ++FNSYG+RRGND VM RGTFANI++ NK + G+  PKT+H P+G+ L VF+AA  Y+  G   I+LAG +YGSG+SRDWAAKGP LLGVKAV+A+S+E+IH+ +L+G+GI PL F PGE+A +LGL+G E ++++ P ++
Sbjct:  743 LLYLGDSVTTDHISPAGSIARSSAAAKYLTNRGLTPREFNSYGARRGNDAVMTRGTFANIKLFNKFI-GKPAPKTIHFPSGQTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHKDHLIGIGIAPLEFLPGENADSLGLSGREVFSLSFPEEL 918          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_DEIRA (Aconitate hydratase OS=Deinococcus radiodurans GN=acn PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.182e-56
Identity = 109/174 (62.64%), Postives = 129/174 (74.14%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLP 557
            L+  GDS+TTDHISPAGS   D+PA +YL ERG+  KDFNSYGSRRGND +M RGTFANIR+ N+L  G  G  T +   GE   +FDA+  YK AG   +VLAG +YG GSSRDWAAKG  LLGVKAVIA+SFERIHRSNLVGMG++PL +K GE A +LG+ G E +   LP
Sbjct:  672 LVKVGDSVTTDHISPAGSFKADTPAGRYLTERGIAPKDFNSYGSRRGNDRIMTRGTFANIRLKNQLAPGTEGGFTTNFLNGEVTSIFDASTAYKEAGVPLVVLAGKDYGMGSSRDWAAKGTFLLGVKAVIAESFERIHRSNLVGMGVLPLQYKNGETADSLGINGDETFEFVLP 845          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_FRATH (Aconitate hydratase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=acn PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.634e-56
Identity = 111/177 (62.71%), Postives = 134/177 (75.71%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKV 566
            LL  GDS+TTDHISPAG+I ++ PA +YL   GV++KDFNSYGSRRGN EVM RGTFANIRI N LL+   G  T +   G + YVFDAAM+YK  G   ++LAG EYG+GSSRDWAAKG  LLGVKAVIA+S+ERIHRSNLVGMG++PL +  G++A TLGL G E + I   N +
Sbjct:  669 LLMLGDSVTTDHISPAGAIPEEYPAGQYLKSHGVEKKDFNSYGSRRGNHEVMMRGTFANIRIRNLLLDNVEGGFTKYHLDGSQQYVFDAAMKYKEKGIPLVILAGKEYGTGSSRDWAAKGTFLLGVKAVIAESYERIHRSNLVGMGVLPLEYVNGQNAKTLGLDGTEMFNIKNLNNI 845          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_BACSU (Aconitate hydratase OS=Bacillus subtilis GN=citB PE=1 SV=4)

HSP 1 Score: 218.009 bits (554), Expect = 2.634e-56
Identity = 109/174 (62.64%), Postives = 131/174 (75.29%), Query Frame = 3
Query:   45 FGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKV 566
            FGDS+TTDHISPAG+I KD+PA KYL E+GV  +DFNSYGSRRGN EVM RGTFANIRI N++  G  G  T + PTGE   ++DA M+YK      +VLAG +YG GSSRDWAAKG  LLG++ VIA+SFERIHRSNLV MG++PL FK GE+A TLGL G E   +++   V
Sbjct:  684 FGDSVTTDHISPAGAIGKDTPAGKYLQEKGVSPRDFNSYGSRRGNHEVMMRGTFANIRIKNQIAPGTEGGFTTYWPTGEVTSIYDACMKYKEDKTGLVVLAGKDYGMGSSRDWAAKGTNLLGIRTVIAESFERIHRSNLVFMGVLPLQFKQGENADTLGLTGKEVIEVDVDETV 857          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_STRMU (Aconitate hydratase OS=Streptococcus mutans GN=acn PE=3 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 4.492e-56
Identity = 111/176 (63.07%), Postives = 135/176 (76.70%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNK 563
            L  FGDS+TTDHISPAG+I ++SPAA+YL E GV   +FNSYGSRRGN EVM RGTFANIRI N+L +G++G  T +   GE L +++AAM YK  G  TIV+AG +YG GSSRDWAAKG  LLGVK V+A+SFERIHRSNLV MGI+PL F  G+ A +L L G+E YT+ LP +
Sbjct:  663 LAKFGDSVTTDHISPAGNIARNSPAARYLEENGVTYAEFNSYGSRRGNHEVMMRGTFANIRIKNELADGKIGGYTKY--EGEILPIYEAAMNYKKNGVSTIVIAGKDYGMGSSRDWAAKGANLLGVKVVLAESFERIHRSNLVMMGILPLQFLDGQTAESLQLTGYETYTVELPEQ 836          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_STAAW (Aconitate hydratase OS=Staphylococcus aureus (strain MW2) GN=acnA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.492e-56
Identity = 110/174 (63.22%), Postives = 131/174 (75.29%), Query Frame = 3
Query:   45 FGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKV 566
            FGDS+TTDHISPAG+I KD+PA KYL +  V  ++FNSYGSRRGN EVM RGTFANIRI N+L  G  G  T + PT E + +FDAAM+YK  G   +VLAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE A +LGL G E  ++N+   V
Sbjct:  677 FGDSVTTDHISPAGAIGKDTPAGKYLQDHQVPIREFNSYGSRRGNHEVMVRGTFANIRIKNQLAPGTEGGFTTYWPTNEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENV 850          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_STAAS (Aconitate hydratase OS=Staphylococcus aureus (strain MSSA476) GN=acnA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.492e-56
Identity = 110/174 (63.22%), Postives = 131/174 (75.29%), Query Frame = 3
Query:   45 FGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKV 566
            FGDS+TTDHISPAG+I KD+PA KYL +  V  ++FNSYGSRRGN EVM RGTFANIRI N+L  G  G  T + PT E + +FDAAM+YK  G   +VLAG +YG GSSRDWAAKG  LLGVK VIA+S+ERIHRSNLV MG++PL FK GE A +LGL G E  ++N+   V
Sbjct:  677 FGDSVTTDHISPAGAIGKDTPAGKYLQDHQVPIREFNSYGSRRGNHEVMVRGTFANIRIKNQLAPGTEGGFTTYWPTNEVMPIFDAAMKYKEDGTGLVVLAGNDYGMGSSRDWAAKGTNLLGVKTVIAQSYERIHRSNLVMMGVLPLEFKKGESADSLGLDGTEEISVNIDENV 850          
The following BLAST results are available for this feature:
BLAST of CX301030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ACON1_ECOLI2.382e-5764.91Aconitate hydratase 1 OS=Escherichia coli (strain ... [more]
IREB2_XENLA3.111e-5759.77Iron-responsive element-binding protein 2 OS=Xenop... [more]
IREB2_RAT9.052e-5759.32Iron-responsive element-binding protein 2 OS=Rattu... [more]
IREB2_MOUSE9.052e-5759.32Iron-responsive element-binding protein 2 OS=Mus m... [more]
ACON_DEIRA1.182e-5662.64Aconitate hydratase OS=Deinococcus radiodurans GN=... [more]
ACON_FRATH2.634e-5662.71Aconitate hydratase OS=Francisella tularensis subs... [more]
ACON_BACSU2.634e-5662.64Aconitate hydratase OS=Bacillus subtilis GN=citB P... [more]
ACON_STRMU4.492e-5663.07Aconitate hydratase OS=Streptococcus mutans GN=acn... [more]
ACON_STAAW4.492e-5663.22Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAS4.492e-5663.22Aconitate hydratase OS=Staphylococcus aureus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC08005A01SK PhyRootSw1 Citrus sinensis cDNA clone C08005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301030 ID=CX301030; Name=CX301030; organism=Citrus sinensis; type=EST; length=580bp
CTCGTGCCGCCTCGTGCCGAATTCGGCACGAGGGCTTGCTCAATTTTGGT
GACAGTATTACTACCGATCACATCTCTCCGGCAGGAAGTATCCACAAGGA
CAGCCCTGCTGCAAAATATCTGCTTGAGCGTGGGGTGGATCGCAAGGACT
TCAATTCTTATGGTAGTCGTAGGGGTAATGATGAAGTGATGGCAAGGGGT
ACCTTTGCCAATATTCGCATTGTTAACAAGCTCTTGAATGGAGAAGTTGG
CCCAAAAACAGTTCATATTCCAACAGGAGAGAAGCTTTATGTTTTTGATG
CAGCAATGAGGTACAAGGCTGCTGGCCATGAGACCATTGTCCTAGCTGGA
GCAGAGTATGGAAGTGGCAGTTCTCGTGATTGGGCTGCTAAGGGTCCAAT
GCTTCTGGGTGTGAAAGCGGTGATTGCCAAGAGCTTTGAGAGAATTCATC
GTAGTAATCTTGTTGGTATGGGCATCATTCCTCTTTGCTTCAAGCCTGGG
GAGGATGCACACACACTGGGGTTAGCTGGTCATGAGCGCTACACAATCAA
CTTACCAAATAAAGTCAGTGAGATAAGGCC
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