CX301030

Overview
NameCX301030
Unique NameCX301030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_RICFE (Aconitate hydratase OS=Rickettsia felis GN=acnA PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.013e-52
Identity = 107/168 (63.69%), Postives = 122/168 (72.62%), Query Frame = 3
Query:   45 FGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            FGDSITTDHISPAGSI K SPAAKYL +  ++  DFNSYGSRRGN EVM RGTFANIRI N++  G  G  T++  +  +  ++DAAM YKA     ++ AG EYGSGSSRDWAAKGP LLGVKAVIA+SFERIHRSNLVGMGI+PL F        L L G E   I
Sbjct:  654 FGDSITTDHISPAGSISKTSPAAKYLTDNHIEPLDFNSYGSRRGNHEVMMRGTFANIRIKNEMCKGVEGGFTINQLSSTQQTIYDAAMDYKANDVPVVIFAGKEYGSGSSRDWAAKGPQLLGVKAVIAESFERIHRSNLVGMGILPLTFTGNNTRLDLKLDGSETIDI 821          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_CORDI (Aconitate hydratase OS=Corynebacterium diphtheriae GN=acn PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 3.935e-52
Identity = 105/171 (61.40%), Postives = 124/171 (72.51%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            L   GDS+TTDHISPA SI   +PAA+YL E GV R D+NS GSRRGN EVM RGTFANIR+ N+L++   G        GE+ ++FDA   YKAAG   +V+AG EYG+GSSRDWAAKG  LLGVKAVI +SFERIHRSNL+GMG+IPL F  GE   +LGL G E + I
Sbjct:  704 LAKLGDSVTTDHISPASSIKPGTPAAQYLDENGVARNDYNSLGSRRGNHEVMMRGTFANIRLQNQLVDIAGGYTRDFTKNGEQAFIFDACQNYKAAGIPLVVIAGKEYGTGSSRDWAAKGTNLLGVKAVITESFERIHRSNLIGMGVIPLQFPAGESHASLGLDGTETFDI 874          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_BRAJA (Aconitate hydratase OS=Bradyrhizobium japonicum GN=acnA PE=3 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 3.935e-52
Identity = 108/176 (61.36%), Postives = 127/176 (72.16%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVG--PK---TVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            L  FGD ITTDHISPAGSI   SPA KYL E  V   DFN YG+RRGN EVM RGTFANIRI N +L G  G  P+   T H P GE++ ++DAAM+Y+      +V AGAEYG+GSSRDWAAKG  LLGV+AVI +SFERIHRSNLVGMG++PL F+ G    +LGL G E+ T+
Sbjct:  674 LAMFGDKITTDHISPAGSIKLTSPAGKYLSEHQVRPADFNQYGTRRGNHEVMMRGTFANIRIKNFMLKGADGNIPEGGLTKHWPDGEQMSIYDAAMKYQQEQVPLVVFAGAEYGNGSSRDWAAKGTRLLGVRAVICQSFERIHRSNLVGMGVLPLTFEEGTSWSSLGLKGDEKVTL 849          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_RICCN (Aconitate hydratase OS=Rickettsia conorii GN=acnA PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 6.713e-52
Identity = 107/167 (64.07%), Postives = 121/167 (72.46%), Query Frame = 3
Query:   48 GDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            GDSITTDHISPAGSI K SPAAKYL +  ++  DFNSYGSRRGN EVM RGTFANIRI N++  G  G  T++   G +  ++DAAM YKA     ++ AG EYGSGSSRDWAAKGP LLGVKAVIA+SFERIHRSNLVGMGI+PL F        L L G E   I
Sbjct:  655 GDSITTDHISPAGSISKTSPAAKYLTDHHIEPLDFNSYGSRRGNHEVMMRGTFANIRIKNEMCKGVEGGFTINQLNGTQQTIYDAAMDYKAHDVSVVIFAGKEYGSGSSRDWAAKGPGLLGVKAVIAESFERIHRSNLVGMGILPLTFTGNNTRLDLKLDGSETIDI 821          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_CORJK (Aconitate hydratase OS=Corynebacterium jeikeium (strain K411) GN=acn PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.159e-50
Identity = 100/169 (59.17%), Postives = 125/169 (73.96%), Query Frame = 3
Query:   48 GDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPT--GEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            GDS+TTDHISPA +I   +PAA+YL   GV+RKD+NS G+RRGN EVM RGTFANIR+ N+LL+G  G  T       G + +++DAAM Y+      +VL G EYG+GSSRDWAAKG +LLGVKAVIA+SFERIHRSNL+GMG++PL F  GE   +LG+ G E + I
Sbjct:  707 GDSVTTDHISPASTIKPGTPAAQYLDANGVERKDYNSLGARRGNHEVMVRGTFANIRLQNQLLDGVSGGYTRDFTQEGGPQSFIYDAAMNYQKENTPLVVLGGKEYGTGSSRDWAAKGTLLLGVKAVIAESFERIHRSNLIGMGVVPLQFPEGESWKSLGIEGTETFDI 875          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_CORGL (Aconitate hydratase OS=Corynebacterium glutamicum GN=acn PE=1 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 1.400e-49
Identity = 100/172 (58.14%), Postives = 125/172 (72.67%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGE-KLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            L   GDS+TTDHISPA SI   +PAA+YL E GV+R D+NS GSRRGN EVM RGTFANIR+ N+L++   G        G  + +++DA++ YKAAG   +VL G EYG+GSSRDWAAKG  LLG++AVI +SFERIHRSNL+GMG++PL F  GE   +LGL G E + I
Sbjct:  706 LAKLGDSVTTDHISPASSIKPGTPAAQYLDEHGVERHDYNSLGSRRGNHEVMMRGTFANIRLQNQLVDIAGGYTRDFTQEGAPQAFIYDASVNYKAAGIPLVVLGGKEYGTGSSRDWAAKGTNLLGIRAVITESFERIHRSNLIGMGVVPLQFPAGESHESLGLDGTETFDI 877          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_COREF (Aconitate hydratase OS=Corynebacterium efficiens GN=acn PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 2.388e-49
Identity = 100/172 (58.14%), Postives = 125/172 (72.67%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVG-PKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            L   GDS+TTDHISPA SI   +PAA+YL   GV+R+D+NS GSRRGN EVM RGTFANIR+ N+L++   G  +      G + +++DA + YK AG   +VLAG EYG+GSSRDWAAKG  LLGV+AVI +SFERIHRSNL+GMG++PL F  GE   +LGL G E + I
Sbjct:  706 LAKLGDSVTTDHISPASSIKPGTPAAQYLDAHGVERQDYNSLGSRRGNHEVMMRGTFANIRLQNQLVDIAGGYTRDFTQEGGPQAFIYDACVNYKEAGIPLVVLAGKEYGTGSSRDWAAKGTNLLGVRAVITESFERIHRSNLIGMGVVPLQFPEGESHESLGLDGTETFDI 877          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_MYCAV (Aconitate hydratase OS=Mycobacterium avium GN=acn PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.499e-43
Identity = 95/169 (56.21%), Postives = 114/169 (67.46%), Query Frame = 3
Query:   48 GDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPT--GEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            GDS+TTDHISPAGSI   +PAA+YL +     +    +G RRGN EVM RGTFANIR+ N L +   G  T       G + +++DAA  Y A     +VL G EYGSGSSRDWAAKG  LLGV+AVIA+SFERIHRSNL+GMG+IPL F  G+ A  LGL G E + I
Sbjct:  732 GDSVTTDHISPAGSIKPGTPAAQYLDDARRGPQGLQLFGCRRGNHEVMIRGTFANIRLRNLLHDDVAGGYTRDFTQDGGPQAFIYDAAQNYAAQNIPLVVLGGKEYGSGSSRDWAAKGTRLLGVRAVIAESFERIHRSNLIGMGVIPLQFPDGKSAKDLGLDGTEVFDI 900          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_GRAVE (Aconitate hydratase, mitochondrial OS=Gracilaria verrucosa PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11
Identity = 41/90 (45.56%), Postives = 50/90 (55.56%), Query Frame = 3
Query:  237 NGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGED 506
            NGE+     +  TGE   V D A  YKA G + +V+    YG GSSR+ AA  P  LG  AVI KSF RIH +NL   G++PL F    D
Sbjct:  624 NGEIN-NVKNAVTGEYGTVPDTARAYKAEGVKWVVIGDENYGEGSSREHAALEPRHLGGVAVIVKSFARIHETNLKKQGMLPLTFNNPAD 712          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACON_DICDI (Probable aconitate hydratase, mitochondrial OS=Dictyostelium discoideum GN=aco2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11
Identity = 58/171 (33.92%), Postives = 79/171 (46.20%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTI 548
            L+      TTDHIS AG      P  KY       R   ++  +      + +    AN  ++N+   GE+GP    +PT         A  YK  G   IV+    YG GSSR+ AA  P  LG KA++ KSF RIH +NL   GI+PL F    D     ++G +R +I
Sbjct:  572 LIKVQGKCTTDHISMAG------PWLKY-------RGHLDNISNNMLIGAINSENGKANA-VLNQF-TGEIGP----VPT--------VARDYKKRGVNWIVVGDENYGEGSSREHAALEPRHLGGKAILVKSFARIHETNLKKQGILPLTFANPSDYDK--ISGDDRISI 713          
The following BLAST results are available for this feature:
BLAST of CX301030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ACON_RICFE3.013e-5263.69Aconitate hydratase OS=Rickettsia felis GN=acnA PE... [more]
ACON_CORDI3.935e-5261.40Aconitate hydratase OS=Corynebacterium diphtheriae... [more]
ACON_BRAJA3.935e-5261.36Aconitate hydratase OS=Bradyrhizobium japonicum GN... [more]
ACON_RICCN6.713e-5264.07Aconitate hydratase OS=Rickettsia conorii GN=acnA ... [more]
ACON_CORJK2.159e-5059.17Aconitate hydratase OS=Corynebacterium jeikeium (s... [more]
ACON_CORGL1.400e-4958.14Aconitate hydratase OS=Corynebacterium glutamicum ... [more]
ACON_COREF2.388e-4958.14Aconitate hydratase OS=Corynebacterium efficiens G... [more]
ACON_MYCAV1.499e-4356.21Aconitate hydratase OS=Mycobacterium avium GN=acn ... [more]
ACON_GRAVE4.402e-1145.56Aconitate hydratase, mitochondrial OS=Gracilaria v... [more]
ACON_DICDI4.402e-1133.92Probable aconitate hydratase, mitochondrial OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC08005A01SK PhyRootSw1 Citrus sinensis cDNA clone C08005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301030 ID=CX301030; Name=CX301030; organism=Citrus sinensis; type=EST; length=580bp
CTCGTGCCGCCTCGTGCCGAATTCGGCACGAGGGCTTGCTCAATTTTGGT
GACAGTATTACTACCGATCACATCTCTCCGGCAGGAAGTATCCACAAGGA
CAGCCCTGCTGCAAAATATCTGCTTGAGCGTGGGGTGGATCGCAAGGACT
TCAATTCTTATGGTAGTCGTAGGGGTAATGATGAAGTGATGGCAAGGGGT
ACCTTTGCCAATATTCGCATTGTTAACAAGCTCTTGAATGGAGAAGTTGG
CCCAAAAACAGTTCATATTCCAACAGGAGAGAAGCTTTATGTTTTTGATG
CAGCAATGAGGTACAAGGCTGCTGGCCATGAGACCATTGTCCTAGCTGGA
GCAGAGTATGGAAGTGGCAGTTCTCGTGATTGGGCTGCTAAGGGTCCAAT
GCTTCTGGGTGTGAAAGCGGTGATTGCCAAGAGCTTTGAGAGAATTCATC
GTAGTAATCTTGTTGGTATGGGCATCATTCCTCTTTGCTTCAAGCCTGGG
GAGGATGCACACACACTGGGGTTAGCTGGTCATGAGCGCTACACAATCAA
CTTACCAAATAAAGTCAGTGAGATAAGGCC
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