CX300940

Overview
NameCX300940
Unique NameCX300940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_CHRVO (FMN-dependent NADH-azoreductase OS=Chromobacterium violaceum GN=azoR PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.467e-11
Identity = 32/96 (33.33%), Postives = 57/96 (59.38%), Query Frame = 3
Query:  138 LLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            LL++ +S    NS +R ++       R++HA+ +   +DL A+PI HL GE +GA + PE   +A+Q+++  L   LI E +  D +++  PM+N+
Sbjct:    3 LLHLDSSILADNSVTRELSAVVADTLRQRHANVETSYRDLAANPIAHLSGEIVGARFAPESDWTATQRSEAALSEQLIEEFIAADVLVIGAPMYNF 98          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_THICR (FMN-dependent NADH-azoreductase OS=Thiomicrospira crunogena (strain XCL-2) GN=azoR PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            M ++L I +S     S S+A+AD F   + EKH        DL+  P PHL   TIGA + P E RS  Q  +  L  D I ++   D I++STPM+N+
Sbjct:    1 MATVLRIDSSALSNGSHSKALADFFQTQWLEKHPTDSFQTLDLSQTPPPHLSEATIGAMFTPTEERSKEQTQQLALSTDYIEQLKKADVILISTPMYNF 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_NOSP7 (FMN-dependent NADH-azoreductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=azoR PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 29/99 (29.29%), Postives = 55/99 (55.56%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            M ++L+I +SP+   S SR ++ EF+ A+R  H +  +  +DL  HP+PH++   I A + P E  +       ++  +L++E +  D  +   PM+N+
Sbjct:    1 MVNILHIDSSPRAERSHSRELSKEFVSAWRAAHPEDAIAYRDLGHHPVPHVNEAWIAAAFSPPETHTPELAEAIRVSDELVDEFLAADRYVFGVPMYNF 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_BEII9 (FMN-dependent NADH-azoreductase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=azoR PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            M  +L I  SP+G +S SR+VAD         +  AK+I +DL A P+PHLD  T+ A    + A +   K   +    L +E++  D ++++TPMWN+
Sbjct:    1 MKQILLIDVSPRGKDSASRSVADTLAARLTSLYPSAKLIRRDLAAQPLPHLDEITLRALSTRDAAEAERLKETARQSDQLTDELLESDLLVIATPMWNF 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_ALCBS (FMN-dependent NADH-azoreductase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=azoR PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.951e-11
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 3
Query:  135 SLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            ++L I +S  G N  S A+ +  + A + KH  A V  +DL+  PIPHLDG  + A +     R+  Q+A     L LI+EI   D I++  PM+N+
Sbjct:    2 NILVIKSSVFGDNGNSSALVNAQVDALKAKHPQATVRVRDLSTDPIPHLDGNRVSAFFTSATQRTDEQQAIDAFSLALIDEIKAADHIVLGLPMYNF 98          
The following BLAST results are available for this feature:
BLAST of CX300940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AZOR_CHRVO4.467e-1133.33FMN-dependent NADH-azoreductase OS=Chromobacterium... [more]
AZOR_THICR7.619e-1138.38FMN-dependent NADH-azoreductase OS=Thiomicrospira ... [more]
AZOR_NOSP77.619e-1129.29FMN-dependent NADH-azoreductase OS=Nostoc punctifo... [more]
AZOR_BEII97.619e-1135.35FMN-dependent NADH-azoreductase OS=Beijerinckia in... [more]
AZOR_ALCBS9.951e-1136.08FMN-dependent NADH-azoreductase OS=Alcanivorax bor... [more]

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Properties
Property NameValue
Genbank descriptionC08003H10SK PhyRootSw1 Citrus sinensis cDNA clone C08003H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300940 ID=CX300940; Name=CX300940; organism=Citrus sinensis; type=EST; length=426bp
CACACTCTCCGTCCTGTATCCAAATCCTTTAGATTCCTTCTATCAAGGAT
GCGCGAGATGAGAAAACTTGCAAAGAAACGGGAAGACAATACAATTTAAT
TGAAATCTTATCAGAGTTCAACAACAACATGCCAAGCCTTCTTTATATTT
CTGCTTCTCCTCAAGGACTTAATTCCCGCTCTCGCGCAGTGGCTGATGAG
TTCATCAAGGCTTATCGTGAGAAGCATGCTGATGCAAAGGTGATCGAGAA
GGACTTAAATGCCCATCCTATTCCTCACTTGGACGGCGAAACAATTGGAG
CTGGATATGTTCCAGAAGAAGCTCGCTCTGCATCCCAAAAAGCGAAGCAT
CAACTCCGTCTTGATTTGATCAATGAGATTGTCGGTGTTGATGATATCAT
TGTCAGCACTCCAATGTGGAACTGGG
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