CX300896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300896 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11 Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 188 GYAVSGGGRGIERVDISVDGGKNW-VEASRYQKTGIPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 505 GYA SGGGR + RV+I+++GG+ W V A + + Y W W F+ + ++D+ + +I +A D A N QPE + IWN+ G++N W RV+ V ++M Sbjct: 377 GYAYSGGGRKVTRVEITMNGGEKWRVCALDHPEKPNKY------GKYWCWCFWSLEVEVLDLLGAKEIAVRAWDEAHNTQPEKL--IWNVMGMMNNCWFRVKTNVCKAHM 478
BLAST of CX300896 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11 Identity = 44/174 (25.29%), Postives = 85/174 (48.85%), Query Frame = 2 Query: 14 RHEEGFFMQKDYKMFPPSVNWDNIN-----WKSRRPLMDFPVQCVICS-----LEDVNVMKPGKA-KVSGYAVSGGGRGIERVDISVDGGKNW-VEASRYQKTGIPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 490 + + ++ KD ++ PP V+ + N +K + + + VI + + +N + + GY+ SGGG+ + RV++++DGG+ W V + + Y W W F+ + ++D+ + +I +A D N QPE + IWN+ G++N W RV++ V Sbjct: 311 QESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEILPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVSTLDHPEKPTKY------GKYWCWCFWSLEVEVLDLLSAKEIAVRAWDETLNTQPEKL--IWNVMGMMNNCWFRVKMNV 476
BLAST of CX300896 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11 Identity = 38/114 (33.33%), Postives = 59/114 (51.75%), Query Frame = 2 Query: 182 VSGYAVSGGGRGIERVDISVDGGKNW--------VEASRYQKTGIPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 490 + GYA SGGGR + RV++++DGG W + ++Y K W W F+ V ++D+ + +I +A D A N QPE + IWN+ G++N W RV+ V Sbjct: 360 IRGYAYSGGGRKVTRVEVTLDGGGTWQVCTLDCPEKPNKYGK-------------YWCWCFWSVEVEVLDLLGAREIAVRAWDEALNTQPEKL--IWNVMGMMNNCWFRVKTNV 458
BLAST of CX300896 vs. ExPASy Swiss-Prot
Match: NIA1_BRANA (Nitrate reductase [NADH], clone PBNBR1405 OS=Brassica napus GN=NIA1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11 Identity = 34/108 (31.48%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 182 VSGYAVSGGGRGIERVDISVDGGKNW--VEASRYQKTGIPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 490 + GYA SGGG+ + RV++++DGG+ W E +K + W W F+ + ++D+ + ++ +A D + N QPE + IWNL G++N W R++ V Sbjct: 386 LKGYAYSGGGKKVTRVEVTLDGGETWSVCELDHQEK-------PNKYGKFWCWCFWSLDVEVLDLLSAKEVAVRAWDESLNTQPEKL--IWNLMGMMNNCWFRIKTNV 484
BLAST of CX300896 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11 Identity = 34/104 (32.69%), Postives = 57/104 (54.81%), Query Frame = 2 Query: 188 GYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 490 GYA SGGG+ + RV++++DGG+ W + K A + W W F+ + ++D+ + +I +A D N QP+ + IWNL G++N W RV+ + Sbjct: 382 GYAYSGGGKKVTRVEVTMDGGETWNVCTLDHKEKPTRYAKY-----WCWCFWSLEVEVLDLLSAKEIAVRAWDETLNTQPDKL--IWNLMGMMNNCWFRVKTNM 478
BLAST of CX300896 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11 Identity = 37/114 (32.46%), Postives = 59/114 (51.75%), Query Frame = 2 Query: 182 VSGYAVSGGGRGIERVDISVDGGKNW--------VEASRYQKTGIPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 490 + GYA SGGGR + RV++++DGG+ W + ++Y K W W + V ++D+ + +I +A D A N QPE + IWN+ G++N W RV+ V Sbjct: 364 IRGYAYSGGGRKVTRVEVTLDGGETWQVCTLDCPEKPNKYGK-------------YWCWCLWSVEVEVLDLLGAREIAVRAWDEALNTQPEKL--IWNVMGMMNNCWFRVKTNV 462
BLAST of CX300896 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11 Identity = 44/178 (24.72%), Postives = 84/178 (47.19%), Query Frame = 2 Query: 14 RHEEGFFMQKDYKMFPPSVNWDNIN-----WKSRRPLMDFPVQCVICS-----LEDVNVMKPGKA-KVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDK-----WAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 490 + + ++ KD ++ PP V+ + N +K + + + VI + + +N + + GY+ SGGG+ + RV++++DGG+ W + DH W W F+ + ++D+ + +I +A D N QPE + IWN+ G++N W RV++ V Sbjct: 311 QESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEILPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVCT----------LDHPEKPTKYGKYWCWCFWSLEVEVLDLLSAKEIAVRAWDETLNTQPEKL--IWNVMGMMNNCWFRVKMNV 476 The following BLAST results are available for this feature:
BLAST of CX300896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300896 ID=CX300896; Name=CX300896; organism=Citrus sinensis; type=EST; length=633bpback to top |