CX300890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: CDC42_HUMAN (Cell division control protein 42 homolog OS=Homo sapiens GN=CDC42 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.226e-50 Identity = 94/162 (58.02%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ +FP YVPTVF+NY V + G+ L L+DTAGQEDYDRLRPLSYP + V LVCFSV +P S ENV+EKW+ E+ H C P +LVG + DLRDD TIE+LAKNKQKP++ E +A + A KY+ECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: CDC42_CANFA (Cell division control protein 42 homolog OS=Canis familiaris GN=CDC42 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.226e-50 Identity = 94/162 (58.02%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ +FP YVPTVF+NY V + G+ L L+DTAGQEDYDRLRPLSYP + V LVCFSV +P S ENV+EKW+ E+ H C P +LVG + DLRDD TIE+LAKNKQKP++ E +A + A KY+ECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RAC2_MOUSE (Ras-related C3 botulinum toxin substrate 2 OS=Mus musculus GN=Rac2 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.826e-50 Identity = 96/162 (59.26%), Postives = 116/162 (71.60%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VD K V L LWDTAGQEDYDRLRPLSYP + V L+CFS+ +P S ENV+ KW EV H C PIILVG K DLRDD TIE+L + K P++ +G A+A I + KYLECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKDIDSVKYLECSALTQRGLKTVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: CDC42_MACFA (Cell division control protein 42 homolog OS=Macaca fascicularis GN=CDC42 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.826e-50 Identity = 94/162 (58.02%), Postives = 116/162 (71.60%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ +FP YVPTVF NY V + G+ L L+DTAGQEDYDRLRPLSYP + V LVCFSV +P S ENV+EKW+ E+ H C P +LVG + DLRDD TIE+LAKNKQKP++ E +A + A KY+ECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNKFPSEYVPTVFNNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: CDC42_CAEEL (Cell division control protein 42 homolog OS=Caenorhabditis elegans GN=cdc-42 PE=1 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 2.594e-49 Identity = 94/162 (58.02%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ +FP YVPTVF+NY V + G+ L L+DTAGQEDYDRLRPLSYP + V LVCFSV P S ENV+EKW+ E+ H C P +LVG + DLRDD +E+LAKNKQKPVS + G +A ++ A KY+ECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLVGTQVDLRDDPGMLEKLAKNKQKPVSTDVGEKLAKELKAVKYVECSALTQKGLKNVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOC_EMENI (GTP-binding protein rhoC OS=Emericella nidulans GN=rhoC PE=3 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 5.779e-49 Identity = 97/164 (59.15%), Postives = 117/164 (71.34%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADV--EVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDG CGKTCLLI +S+G FPE YVPTVFENY+ GK VELALWDTAGQE+YDRLRPLSYP++ ++ VCF++D P SLENV +KW EVLHFC PIILVG K DLR+ IE L PV+ E+G AVA ++ A Y+ECS++ GV VF+ Sbjct: 75 VGDGGCGKTCLLISYSQGYFPEKYVPTVFENYITQTLHRRSGKTVELALWDTAGQEEYDRLRPLSYPETDLLFVCFAIDCPASLENVMDKWYPEVLHFCPTTPIILVGLKSDLRNKRTCIELLKTQGLTPVTPEQGQAVAGRMNA-SYVECSSKEMRGVDSVFQ 237
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO3_SCHCO (GTP-binding protein Rho3 OS=Schizophyllum commune GN=RHO3 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 5.779e-49 Identity = 91/160 (56.88%), Postives = 118/160 (73.75%), Query Frame = 2 Query: 5 GDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 GDGACGKT LL VF++G F +VY PTVFENYV D+ +D + VEL+LWDTAGQE++DRLR LSY ++HVI++CFSVDNP SLENV+ KW+ E+L +C G+ ++LV K DLRDD ++ L + EEG VA +I A +YLECS++ GV EVF Sbjct: 24 GDGACGKTSLLNVFTRGFFTQVYEPTVFENYVHDLYIDDQLVELSLWDTAGQEEFDRLRSLSYAETHVIMICFSVDNPTSLENVESKWLDEILEYCPGVKLVLVDSKCDLRDDPAVLDRLQRYGTHTDQYEEGLGVARRIRASRYLECSSKHNRGVNEVF 183
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RAC1C_DICDI (Rho-related protein rac1C OS=Dictyostelium discoideum GN=rac1C PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 7.547e-49 Identity = 93/162 (57.41%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDGK + L LWDTAGQEDYDRLRPLSYP + V L+CFS+ +P S ENV KW EV H +PIILVG K D+R+D +T + L + K PVS E+G +I A+KYLECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSYENVSGKWGPEVFHHAPNVPIILVGTKMDMREDKETQDRLKEKKLYPVSYEQGLLKMKEINAFKYLECSALTQKGLKTVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RAC2_CAVPO (Ras-related C3 botulinum toxin substrate 2 OS=Cavia porcellus GN=RAC2 PE=2 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 9.857e-49 Identity = 93/162 (57.41%), Postives = 116/162 (71.60%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VD K V L LWDTAGQEDYDRLRPLSYP + V L+CFS+ +P S ENV W +V H C PIIL+G K DLRDD +TIE+L + K P++ +G A+A +I + KYLECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVHANWYPKVRHHCPSTPIILLGTKLDLRDDKETIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RAC1A_DICDI (Rho-related protein rac1A OS=Dictyostelium discoideum GN=rac1A PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 9.857e-49 Identity = 92/162 (56.79%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDGK + L LWDTAGQEDYDRLRPLSYP + V L+CFS+ +P S ENV KW E+ H +PIILVG K D+R+D +T + L + K P+S E+G A +I A KYLECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSFENVNGKWHPEICHHAPNVPIILVGTKLDMREDKETQDRLKEKKLYPISYEQGLAKMKEINAVKYLECSALTQKGLKTVFD 170 The following BLAST results are available for this feature:
BLAST of CX300890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 427
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300890 ID=CX300890; Name=CX300890; organism=Citrus sinensis; type=EST; length=599bpback to top |