CX300890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOD_HUMAN (Rho-related GTP-binding protein RhoD OS=Homo sapiens GN=RHOD PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.287e-48 Identity = 88/162 (54.32%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDG CGKT LL+VF+ G FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DYDRLRPL YPD+ V+L+CF V +P+S +N+ +W EV HFC+ +PII+VGCK DL D + +L +N +PV+ G +A +GA YLECSAR D V VF+ Sbjct: 23 VGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RACC_DICDI (Rho-related protein racC OS=Dictyostelium discoideum GN=racC PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.287e-48 Identity = 85/162 (52.47%), Postives = 119/162 (73.46%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 +GDGA GKTCLLI ++ FPE Y+PTVF+NYV ++ +++EL LWDTAGQE+YD+LRPLSY +++V L+CFS+ NP S ENV KW EV+HFC +P ILVG K D RDD +++L + KP++ E+G +A +I A KY+ECSA++ +K+VF+ Sbjct: 12 IGDGAVGKTCLLISYANNRFPEDYIPTVFDNYVVNLTAGDRNIELGLWDTAGQEEYDKLRPLSYANANVFLICFSITNPVSFENVYTKWYPEVMHFCPEVPQILVGTKLDTRDDRGVLDKLQQTGHKPITTEQGNDLARRIKAIKYMECSAKTSQNLKQVFD 173
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOG_MOUSE (Rho-related GTP-binding protein RhoG OS=Mus musculus GN=Rhog PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.681e-48 Identity = 90/161 (55.90%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 VGDGA GKTCLLI ++ FP+ Y+PTVF+NY A VDG+ V L LWDTAGQE+YDRLR LSYP ++V ++CFS+ +P S ENV+ KW EV H C +PI+LVG K+DLR T+ L + Q P++ ++G A+A +I A +YLECSA DGVKEVF Sbjct: 9 VGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQDGVKEVF 169
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOG_HUMAN (Rho-related GTP-binding protein RhoG OS=Homo sapiens GN=RHOG PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.681e-48 Identity = 90/161 (55.90%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 VGDGA GKTCLLI ++ FP+ Y+PTVF+NY A VDG+ V L LWDTAGQE+YDRLR LSYP ++V ++CFS+ +P S ENV+ KW EV H C +PI+LVG K+DLR T+ L + Q P++ ++G A+A +I A +YLECSA DGVKEVF Sbjct: 9 VGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQDGVKEVF 169
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOG_CRICR (Rho-related GTP-binding protein RhoG OS=Cricetus cricetus GN=RHOG PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.681e-48 Identity = 90/161 (55.90%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 VGDGA GKTCLLI ++ FP+ Y+PTVF+NY A VDG+ V L LWDTAGQE+YDRLR LSYP ++V ++CFS+ +P S ENV+ KW EV H C +PI+LVG K+DLR T+ L + Q P++ ++G A+A +I A +YLECSA DGVKEVF Sbjct: 9 VGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQDGVKEVF 169
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RAC1B_DICDI (Rho-related protein rac1B OS=Dictyostelium discoideum GN=rac1B PE=1 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 4.892e-48 Identity = 92/162 (56.79%), Postives = 114/162 (70.37%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ FP Y+PTVF+NY A+V VDGK + L LWDTAGQEDYDRLRPLSYP + V L+CFS+ +P S ENV KW E+ H +PIILVG K D+R+D T + L + K PVS E+G + +I A KYLECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIVSPASFENVNGKWHPEICHHAPNVPIILVGTKLDMREDRDTQDRLKEKKLYPVSYEQGLSKMKEINAVKYLECSALTQKGLKTVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RACD_DICDI (Rho-related protein racD OS=Dictyostelium discoideum GN=racD PE=2 SV=3) HSP 1 Score: 189.119 bits (479), Expect = 1.423e-47 Identity = 89/161 (55.28%), Postives = 120/161 (74.53%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 VGDGA GKT LLI+++ FP+ YVPTVF+N+ D K V L LWDTAGQEDYD LRPLSYP + V ++C+SV DSL+N++ KW+ E+ QG PIILVG K DLR+D KT+ +L ++KQ+PVS++EG A+A +IGA ++ ECSA +G+GV ++F Sbjct: 14 VGDGAVGKTSLLILYTTKAFPKDYVPTVFDNFNCLEMYDNKPVNLVLWDTAGQEDYDNLRPLSYPQTDVFIICYSVVKRDSLDNIKYKWLPEINQTNQGTPIILVGTKTDLREDKKTLSQLQESKQEPVSRDEGVALAKEIGAVQFFECSALTGNGVNDIF 174
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: CDC42_SCHPO (Cell division control protein 42 homolog OS=Schizosaccharomyces pombe GN=cdc42 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.859e-47 Identity = 89/162 (54.94%), Postives = 116/162 (71.60%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ +FP YVPTVF+NY V + + L L+DTAGQEDYDRLRPLSYP + V LVCFSV +P S ENV+EKW EV H C G+P ++VG + DLRDD ++LA+ Q P++ E+G +A ++GA KY+ECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOF_BOVIN (Rho-related GTP-binding protein RhoF OS=Bos taurus GN=RHOF PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.141e-47 Identity = 85/161 (52.80%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 VGDG CGKT LL+V+S+G FPE Y P+VFE Y A V V K V L L+DTAGQEDYDRLRPLSY ++H++L+C+ V NP S +NV KW EV HFC+G+P++L+GCK DLR D + + +L + +P++ +G + +I A YLECSA+ + V++VF Sbjct: 29 VGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGQSACEQIRAALYLECSAKFRENVEDVF 189
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOF_HUMAN (Rho-related GTP-binding protein RhoF OS=Homo sapiens GN=RHOF PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 5.409e-47 Identity = 85/161 (52.80%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 VGDG CGKT LL+V+S+G FPE Y P+VFE Y A V V K V L L+DTAGQEDYDRLRPLSY ++H++L+C+ V NP S +NV KW EV HFC+G+P++L+GCK DLR D + + +L + +P++ +G + +I A YLECSA+ + V++VF Sbjct: 25 VGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAKFRENVEDVF 185 The following BLAST results are available for this feature:
BLAST of CX300890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 427
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300890 ID=CX300890; Name=CX300890; organism=Citrus sinensis; type=EST; length=599bpback to top |