CX300890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO3_YEAST (GTP-binding protein RHO3 OS=Saccharomyces cerevisiae GN=RHO3 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 7.064e-47 Identity = 91/182 (50.00%), Postives = 119/182 (65.38%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNK---------------------QKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 +GDGACGKT LL VF++G FPEVY PTVFENY+ D+ VD KH+ L+LWDTAGQE++DRLR LSY D+ I++CFS+D+ DSLENVQ KW+ E+ C+G+ ++LV K DLR++ + N + +S EEG A+A KIGA +YLECSA+ GV E F Sbjct: 22 LGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAF 203
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: CDC42_YEAST (Cell division control protein 42 OS=Saccharomyces cerevisiae GN=CDC42 PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 9.226e-47 Identity = 88/162 (54.32%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ +FP YVPTVF+NY V + + L L+DTAGQEDYDRLRPLSYP + V LVCFSV +P S ENV+EKW EV H C G+P ++VG + DLRDD IE+L + + +P++ E+G+ +A ++ A KY+ECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHHHCPGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLARELKAVKYVECSALTQRGLKNVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RND3_RAT (Rho-related GTP-binding protein RhoE OS=Rattus norvegicus GN=Rnd3 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.574e-46 Identity = 85/162 (52.47%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSA-RSGDGVKEVF 484 VGD CGKT LL VF+K FPE YVPTVFENY A E+D + +EL+LWDT+G YD +RPLSYPDS +L+CF + P++L++V +KW E+ FC ++LVGCK DLR D T+ EL+ ++Q PVS ++GA +A +IGA Y+ECSA +S + V+++F Sbjct: 29 VGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIF 190
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RND3_PONAB (Rho-related GTP-binding protein RhoE OS=Pongo abelii GN=RND3 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.574e-46 Identity = 85/162 (52.47%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSA-RSGDGVKEVF 484 VGD CGKT LL VF+K FPE YVPTVFENY A E+D + +EL+LWDT+G YD +RPLSYPDS +L+CF + P++L++V +KW E+ FC ++LVGCK DLR D T+ EL+ ++Q PVS ++GA +A +IGA Y+ECSA +S + V+++F Sbjct: 29 VGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIF 190
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RND3_MOUSE (Rho-related GTP-binding protein RhoE OS=Mus musculus GN=Rnd3 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.574e-46 Identity = 85/162 (52.47%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSA-RSGDGVKEVF 484 VGD CGKT LL VF+K FPE YVPTVFENY A E+D + +EL+LWDT+G YD +RPLSYPDS +L+CF + P++L++V +KW E+ FC ++LVGCK DLR D T+ EL+ ++Q PVS ++GA +A +IGA Y+ECSA +S + V+++F Sbjct: 29 VGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIF 190
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RND3_HUMAN (Rho-related GTP-binding protein RhoE OS=Homo sapiens GN=RND3 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.574e-46 Identity = 85/162 (52.47%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSA-RSGDGVKEVF 484 VGD CGKT LL VF+K FPE YVPTVFENY A E+D + +EL+LWDT+G YD +RPLSYPDS +L+CF + P++L++V +KW E+ FC ++LVGCK DLR D T+ EL+ ++Q PVS ++GA +A +IGA Y+ECSA +S + V+++F Sbjct: 29 VGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIF 190
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RACB_DICDI (Rho-related protein racB OS=Dictyostelium discoideum GN=racB PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.574e-46 Identity = 88/162 (54.32%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ FP YVPTVF+NY A+V VD K V L LWDTAGQEDYDRLRPLSYP + V L+CF++ + S NV+ KW EV H C IILVG K DLR+D +++E+L + Q+P++ ++G +A +I A+ Y+ECSA + G+K+VF+ Sbjct: 9 VGDGAVGKTCLLISYTSNSFPTEYVPTVFDNYSANVMVDNKTVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICFAIISQTSYTNVKSKWWPEVTHHCPNCTIILVGTKCDLREDKESLEKLREKHQQPLTFQQGEQMAKEIKAFCYMECSALTQKGLKQVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: CDC42_CANAL (Cell division control protein 42 homolog OS=Candida albicans GN=CDC42 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.574e-46 Identity = 89/162 (54.94%), Postives = 116/162 (71.60%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ +FP YVPTVF+NY V + + L L+DTAGQEDYDRLRPLSYP + V LVCFSV +P S ENV+EKW EV H C G+PII+VG + DLR+D ++ L + K P++QE+G +A ++ A KY+ECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTSKFPADYVPTVFDNYAVTVMIGDEPFTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPASFENVKEKWFPEVHHHCPGVPIIIVGTQTDLRNDDVILQRLHRQKLSPITQEQGEKLAKELRAVKYVECSALTQRGLKTVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RND3_PIG (Rho-related GTP-binding protein RhoE OS=Sus scrofa GN=RND3 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.506e-46 Identity = 84/162 (51.85%), Postives = 117/162 (72.22%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSA-RSGDGVKEVF 484 VGD CG+T LL VF+K FPE YVPTVFENY A E+D + +EL+LWDT+G YD +RPLSYPDS +L+CF + P++L++V +KW E+ FC ++LVGCK DLR D T+ EL+ ++Q PVS ++GA +A +IGA Y+ECSA +S + V+++F Sbjct: 29 VGDSQCGRTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIF 190
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RACA_ENTHI (Rho-related protein racA OS=Entamoeba histolytica GN=RACA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.506e-46 Identity = 87/162 (53.70%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ FP Y+PTVF+NY A V VD K + L LWDTAGQEDYDRLRPLSYP + V L+CFSV +P S +NV KW EV H C P +LVG K D+R+D + ++ L + K P++ E+G A IGA KY+ECSA + ++ VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNAFPNEYIPTVFDNYSATVMVDSKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPPSFDNVSSKWQPEVSHHCPKTPCLLVGTKLDMREDKEQLKRLEEKKITPITTEQGEAKCKDIGAVKYIECSALTQKNLRLVFD 170 The following BLAST results are available for this feature:
BLAST of CX300890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 427
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300890 ID=CX300890; Name=CX300890; organism=Citrus sinensis; type=EST; length=599bpback to top |