CX300890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOQ_RAT (Rho-related GTP-binding protein RhoQ OS=Rattus norvegicus GN=Rhoq PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.980e-46 Identity = 88/162 (54.32%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLL+ ++ FPE YVPTVF++Y V V GK L L+DTAGQEDYDRLRPLSYP + V L+CFSV NP S +NV+E+W+ E+ + +P +L+G + DLRDD KT+ L K+KPV E+G +A +IGA Y+ECSA + G+K VF+ Sbjct: 15 VGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOQ_MOUSE (Rho-related GTP-binding protein RhoQ OS=Mus musculus GN=Rhoq PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 5.980e-46 Identity = 88/162 (54.32%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLL+ ++ FPE YVPTVF++Y V V GK L L+DTAGQEDYDRLRPLSYP + V L+CFSV NP S +NV+E+W+ E+ + +P +L+G + DLRDD KT+ L K+KPV E+G +A +IGA Y+ECSA + G+K VF+ Sbjct: 15 VGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOQ_HUMAN (Rho-related GTP-binding protein RhoQ OS=Homo sapiens GN=RHOQ PE=1 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 7.810e-46 Identity = 87/162 (53.70%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLL+ ++ FPE YVPTVF++Y V V GK L L+DTAGQEDYDRLRPLSYP + V L+CFSV NP S +NV+E+W+ E+ + +P +L+G + DLRDD KT+ L K+KP+ E+G +A +IGA Y+ECSA + G+K VF+ Sbjct: 15 VGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO3_ASHGO (GTP-binding protein RHO3 OS=Ashbya gossypii GN=RHO3 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 7.810e-46 Identity = 90/174 (51.72%), Postives = 120/174 (68.97%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLR-------DDAKTIEELAKNKQKP------VSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 +GDGACGKT LL VF++G FP+VY PTVFENY+ D+ VD +H+ L+LWDTAGQE++DRLR LSY D+H I++CFSVD+ DSLENV+ KW+SE+ C+G+ ++LV K DLR + A T + K + +EG A+A +IGA +YLECSA+ GV E F Sbjct: 21 LGDGACGKTSLLNVFTRGYFPKVYEPTVFENYIHDIFVDNQHITLSLWDTAGQEEFDRLRSLSYSDTHTIMLCFSVDSRDSLENVKNKWVSEIADHCEGVKLVLVALKCDLRSSDEYGNESAITPGSIQNQKYNGGGGNGLIPYDEGLAMAKQIGALRYLECSAKMNRGVNEAF 194
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RAC2_CAEEL (Ras-related protein rac-2 OS=Caenorhabditis elegans GN=rac-2 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 7.810e-46 Identity = 87/162 (53.70%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLL+ ++ FP Y+ TVF+ Y +V VDG+ + L+LWDTAGQ+DYD+ R LS+P + V LVCF+++NP S ENV+ KW EV H C PIILVG K DLR+D TIE L + + +PVS +G +A +I A KYLECSA + G+K+VF+ Sbjct: 9 VGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTIERLRERRLQPVSHTQGYVMAKEIKAVKYLECSALTQIGLKQVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO3_SCHPO (GTP-binding protein rho3 OS=Schizosaccharomyces pombe GN=rho3 PE=1 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.332e-45 Identity = 90/161 (55.90%), Postives = 114/161 (70.81%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 +GDGA GKT LL VF+KG FP+VY PT+FENY+ D+ VDG +EL+LWDTAGQE+YD+LR LSY D+HVI++CF+VD+ DSLENV KW+ EV C G+ ++LV K DLR +E + K + EEG A A KI A +YLECSA+ GV E F Sbjct: 19 LGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRG----ADEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAF 175
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RECG_ENTHI (Rho-related protein racG OS=Entamoeba histolytica GN=RACG PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.332e-45 Identity = 89/162 (54.94%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTC+LI ++ FP Y+PTVFENY + + VD + L LWDTAGQEDYDRLRPLSYP + V LVCFSV P S ENV+ KW E+ C +PIILVG K D+RDD + ++ LA+ P+ +G +A KIGA KY+ECSA + +K VFE Sbjct: 9 VGDGAVGKTCMLISYTTNAFPNEYIPTVFENYNSSLVVDDVKINLGLWDTAGQEDYDRLRPLSYPSTDVFLVCFSVIAPASYENVEGKWKPEIDQHCPNVPIILVGTKIDIRDDPEQVKRLAEKNIVPIQPPQGDELAKKIGAVKYIECSALTQANLKLVFE 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 1.740e-45 Identity = 91/162 (56.17%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 +GDGACGKT LL VF+ G+FPE Y PTVFENYV D VDG V L LWDTAGQE+Y+RLRP SY + +IL+ F+VDN +SL N + KW E L +C PI+LVG K+DLR +A +E A ++ P+ E+ VA IGA KY+ECSA +G+GV +VFE Sbjct: 13 IGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAH-FKENATDEMVPI--EDAKQVARAIGAKKYMECSALTGEGVDDVFE 171
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: CDC42_ASHGO (Cell division control protein 42 OS=Ashbya gossypii GN=CDC42 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.740e-45 Identity = 86/162 (53.09%), Postives = 115/162 (70.99%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVFE 487 VGDGA GKTCLLI ++ +FP YVPTVF+NY V + + L L+DTAGQEDYDRLRPLSYP + V LVCFSV +P S ENV+EKW EV H C G+P ++VG + DLR++ IE+L + + +P++ E+G A ++ A KY+ECSA + G+K VF+ Sbjct: 9 VGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVVSPPSFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRENKMVIEKLQRQRLRPITPEQGEKFARELRAVKYVECSALTQRGLKNVFD 170
BLAST of CX300890 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.876e-45 Identity = 82/161 (50.93%), Postives = 112/161 (69.57%), Query Frame = 2 Query: 2 VGDGACGKTCLLIVFSKGEFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILVCFSVDNPDSLENVQEKWISEVLHFCQGLPIILVGCKRDLRDDAKTIEELAKNKQKPVSQEEGAAVAAKIGAYKYLECSARSGDGVKEVF 484 VGDG CGKT LL+V+ +G FPE Y P+VFE Y A V V K V L L+DTAGQEDYDRLRPLSY ++H++L+C+ V NP S +NV KW EV HFC+G+P +L+GCK DLR D + + +L + +P++ +G ++ YLECSA+ + V++VF Sbjct: 25 VGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLNACEQMRGALYLECSAKFRENVEDVF 185 The following BLAST results are available for this feature:
BLAST of CX300890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 427
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300890 ID=CX300890; Name=CX300890; organism=Citrus sinensis; type=EST; length=599bpback to top |