CX300880

Overview
NameCX300880
Unique NameCX300880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21
Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED 307
            G+P YVAPE+L+   YG ++D+WS GVILYILL G PPF+ +    +F QI+     F    W  IS  AKDL+ K+L   P KR++A + L HPW+ ++
Sbjct:  189 GSPYYVAPEVLK-KCYGPEIDVWSAGVILYILLSGVPPFWAETESGIFRQILQGKLDFKSDPWPTISEAAKDLIYKMLERSPKKRISAHEALCHPWIVDE 287          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MYLKC_DICDI (Probable myosin light chain kinase DDB_G0282429 OS=Dictyostelium discoideum GN=DDB_G0282429 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.247e-20
Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDG 310
            CG+P YVAPE+L    Y K  DLWS+GVI Y+LL G  PF+D NN  L+ +I N +Y +P+     +S  AKDLVS L+  +P KR   +Q L HPW+  +G
Sbjct:  195 CGSPEYVAPEVLECKPYDKACDLWSVGVITYVLLTGCFPFWDKNNAVLYEKIRNVDYGWPE--GLEVSNEAKDLVSHLIEKNPEKRFTFEQCLIHPWVTGEG 294          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MKNK1_XENLA (MAP kinase-interacting serine/threonine-protein kinase 1 OS=Xenopus laevis GN=mknk1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.247e-20
Identity = 52/121 (42.98%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 CGTPGYVAPEILR-----GTAYGKQVDLWSIGVILYILLCGFPPFYDDNN---------------KKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED 307
            CG+  Y+APE++       T Y K+ DLWS+GVILYI+L G+PPF  +                  KLF  I    Y FP+  W++IS  AKDL+SKLL+ D  +RL+A Q+L HPW+  D
Sbjct:  204 CGSAEYMAPEVVEVFTEEATFYDKRCDLWSLGVILYIMLSGYPPFVGNCGTDCGWDRGEVCRVCQNKLFESIQEGKYEFPEKDWSHISISAKDLISKLLVRDAKERLSAFQVLQHPWLQGD 324          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.247e-20
Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            G+  YVAPE+L    YGK++D+WS GV+LYILL G PPF+ +  K +F  I+          W  IS  AKDL+ K+LI DP KR+ A + L HPWM
Sbjct:  248 GSAYYVAPEVLHRN-YGKEIDVWSAGVMLYILLSGVPPFWGETEKTIFEAILEGKLDLETSPWPTISESAKDLIRKMLIRDPKKRITAAEALEHPWM 343          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MKNK1_HUMAN (MAP kinase-interacting serine/threonine-protein kinase 1 OS=Homo sapiens GN=MKNK1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 52/118 (44.07%), Postives = 70/118 (59.32%), Query Frame = 2
Query:    5 CGTPGYVAPEIL-----RGTAYGKQVDLWSIGVILYILLCGFPPF---------YDDNN------KKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            CG+  Y+APE++     + T Y K+ DLWS+GV+LYI+L G+PPF         +D          KLF  I    Y FPD  W +IS  AKDL+SKLL+ D  +RL+A Q+L HPW+
Sbjct:  257 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 374          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: DAPK1_MOUSE (Death-associated protein kinase 1 OS=Mus musculus GN=Dapk1 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 55/166 (33.13%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED------GXXXXXXXXXXXXXYNARRRFRSAIRAVQITQLLRKLHPGASAKPVSILSAVESEETSGE 487
            GTP +VAPEI+     G + D+WSIGVI YILL G  PF  D  ++  A +   NY F + ++ N S LAKD + +LL+ DP KR+     L HPW+                       + AR++++ ++R + + Q L +     S    S +S   S++T  E
Sbjct:  179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYDFEEEFFRNTSTLAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAARKKWKQSVRLISLCQRLSR-----SFLSRSNMSVARSDDTLDE 339          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED 307
            G+P YVAPE+LR   YG + D+WS GVILYILL G PPF+ ++   +F QI+     F    W +IS  AKDL+ K+L  +P  RL A ++L HPW+ +D
Sbjct:  197 GSPYYVAPEVLR-KLYGPESDVWSAGVILYILLSGVPPFWAESEPGIFRQILLGKLDFHSEPWPSISDSAKDLIRKMLDQNPKTRLTAHEVLRHPWIVDD 295          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            G+P Y+APE+L+   YG ++D+WS GVILYILLCG PPF+ ++ + +   I+     F    W NIS  AK+LV ++L  DP +RL A Q+L HPW+
Sbjct:  217 GSPYYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGVIDFKREPWPNISETAKNLVRQMLEPDPKRRLTAKQVLEHPWI 312          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAFK (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            GTP YVAP++L G  Y K+ D+WS GVI+Y LLCG+PPFY D + ++  ++    + F +  W +IS  AK+L++KLL  +PN+R   ++ L HPW+
Sbjct:  231 GTPYYVAPQVLDGK-YDKKCDIWSSGVIMYTLLCGYPPFYGDTDNEVLKKVKKGEFCFYENDWGSISSDAKNLITKLLTYNPNERCTIEEALNHPWI 326          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAF7 (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate 3D7) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            GTP YVAP++L G  Y K+ D+WS GVI+Y LLCG+PPFY D + ++  ++    + F +  W +IS  AK+L++KLL  +PN+R   ++ L HPW+
Sbjct:  231 GTPYYVAPQVLDGK-YDKKCDIWSSGVIMYTLLCGYPPFYGDTDNEVLKKVKKGEFCFYENDWGSISSDAKNLITKLLTYNPNERCTIEEALNHPWI 326          
The following BLAST results are available for this feature:
BLAST of CX300880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDPKB_ARATH9.545e-2146.00Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
MYLKC_DICDI1.247e-2048.04Probable myosin light chain kinase DDB_G0282429 OS... [more]
MKNK1_XENLA1.247e-2042.98MAP kinase-interacting serine/threonine-protein ki... [more]
CDPKT_ARATH1.247e-2048.45Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]
MKNK1_HUMAN1.628e-2044.07MAP kinase-interacting serine/threonine-protein ki... [more]
DAPK1_MOUSE1.628e-2033.13Death-associated protein kinase 1 OS=Mus musculus ... [more]
CDPK_SOYBN1.628e-2048.00Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPKD_ARATH1.628e-2047.42Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPK2_PLAFK1.628e-2045.36Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
CDPK2_PLAF71.628e-2045.36Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]

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Properties
Property NameValue
Genbank descriptionC08003C04SK PhyRootSw1 Citrus sinensis cDNA clone C08003C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300880 ID=CX300880; Name=CX300880; organism=Citrus sinensis; type=EST; length=630bp
AGCTTGTGGCACCCCAGGATATGTAGCTCCAGAAATTTTACGCGGTACGG
CCTACGGGAAACAAGTCGATCTATGGTCCATTGGTGTGATTCTATACATT
CTATTATGTGGGTTCCCACCTTTTTATGACGACAATAATAAAAAACTCTT
TGCTCAGATTATAAATGCAAATTATTCATTCCCTGATCCCTACTGGACGA
ATATTTCGCCATTAGCAAAAGATTTAGTATCAAAATTATTAATAGTCGAT
CCTAATAAACGATTAAATGCTGATCAGATTTTAGCTCATCCATGGATGCA
TGAAGACGGATCAAAATTATCATTAGATTTAAAATCGAATTTAAAATCAT
ATAATGCACGAAGAAGATTTAGATCAGCGATTAGAGCTGTACAAATAACA
CAATTATTACGAAAATTACATCCTGGTGCATCAGCAAAACCAGTTTCTAT
TCTCTCTGCAGTCGAATCAGAGGAAACGAGTGGTGAGAATACCACACAAC
CAAATACTAGCAATCATAGTAATGAAGGCAGTGAACCTGCAACACATGCA
AACTCTTTTAAATCACCTTTAGAATCTGATTCAGAAGAAGATACGAATAC
AACTGCTGCTAGTAGCATTGGGAATATAGG
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