CX300880

Overview
NameCX300880
Unique NameCX300880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: DCLK1_MOUSE (Serine/threonine-protein kinase DCLK1 OS=Mus musculus GN=Dclk1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.619e-28
Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPF--YDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDG 310
            CGTP YVAPEI+  T YG +VD+W+ GVI YILLCGFPPF    D+ + LF QI+     FP PYW N+S  AK+L++ +L+V+ ++R +A Q+L HPW+++DG
Sbjct:  564 CGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELINMMLLVNVDQRFSAVQVLEHPWVNDDG 667          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: DCLK3_HUMAN (Serine/threonine-protein kinase DCLK3 OS=Homo sapiens GN=DCLK3 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.726e-28
Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFY--DDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDG 310
            CGTP YVAPEIL    YG +VD+W+ GVILYILLCGFPPF   + +  +LF  I   ++ F  PYW NIS  AKDLVS+LL+VDP KR  A Q+L HPW+   G
Sbjct:  514 CGTPTYVAPEILSEKGYGLEVDMWAAGVILYILLCGFPPFRSPERDQDELFNIIQLGHFEFLPPYWDNISDAAKDLVSRLLVVDPKKRYTAHQVLQHPWIETAG 617          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KC2D2_DANRE (Calcium/calmodulin-dependent protein kinase type II delta 2 chain OS=Danio rerio GN=camk2d2 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.172e-28
Identity = 70/204 (34.31%), Postives = 105/204 (51.47%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE----DGXXXXXXXXXXXXXYNARRRFRSAI-RAVQITQLLRKLHPGASAKPVSILSAVESEETSGENTTQPNTSNHSNEGSEPATHANSFKSPLESDSEEDTNTT 604
            GTPGY++PE+LR   YGK VD+W+ GVILYILL G+PPF+D++  +L+ QI    Y FP P W  ++P AKDL++K+L ++P+KR+ A +   HPW+ +                   +NARR+ + AI   + +T+         + KP  +    ++   S    T P  +       EP T           +S E  NTT
Sbjct:  175 GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAPKHPWICQRSTVASMMHRQETVECLKKFNARRKLKGAILTTLLVTRNFSAAKSLLNKKPDGVKVNNKTNLASSPKDTGPAPA------LEPQTTVIHNPVDRNKESTESANTT 372          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: FHKC_DICDI (Probable serine/threonine-protein kinase fhkC OS=Dictyostelium discoideum GN=fhkC PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.172e-28
Identity = 62/106 (58.49%), Postives = 67/106 (63.21%), Query Frame = 2
Query:    5 CGTPGYVAPEIL---RGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM--HED 307
            CGTP YVAPEIL       YGK VDLWSIGVI YILLCGFPPF D   K  F +I N  +SFP PYW  IS  AK L+  L+ VD  KR   DQ L HPW   HE+
Sbjct:  379 CGTPQYVAPEILTKGEREGYGKSVDLWSIGVITYILLCGFPPFGDPQTKDFFEKIKNGGFSFPSPYWDEISDEAKSLIKNLIKVDVEKRFTIDQALNHPWFTNHEE 484          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: DCLK2_HUMAN (Serine/threonine-protein kinase DCLK2 OS=Homo sapiens GN=DCLK2 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 8.061e-28
Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNN--KKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED 307
            CGTP YVAPEI+  T YG +VD+W+ GVI YILLCGFPPF  +NN  + LF QI+     FP PYW NI+  AK+L+S++L V+   R  A QIL+HPW+ +D
Sbjct:  552 CGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGQILSHPWVSDD 654          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CAMKV_XENLA (CaM kinase-like vesicle-associated protein OS=Xenopus laevis GN=camkv PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.061e-28
Identity = 65/186 (34.95%), Postives = 105/186 (56.45%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDD--------NNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYNARRRFRSA--IRAVQITQLLRKLHPGASAKPVSILSAVESEETSGENTTQPNTSNHSNEGS 532
            CGTP Y+APE++    YG+ VD W+IGVI+YILL G PPFYD+        ++K LF +I++ +Y F  PYW +ISP AKDLV++L+ V+ ++R+ A   ++H W+   G                 + F  A   +AV++T ++++L       P +   + +S++T    T  P+ +N   EG+
Sbjct:  182 CGTPEYLAPEVVARQRYGRPVDCWAIGVIMYILLSGNPPFYDELEEEDYESHDKNLFRKILHGDYEFDSPYWDDISPAAKDLVTRLMEVEQDQRVTAADAISHEWI--SGNAASDKNIKDGVCAQIEKNFAKAKWKKAVRVTTMMKRLRAPEQTDPGTPSPSKDSDKTPSMATPAPSPANTPAEGA 365          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CAMKV_DANRE (CaM kinase-like vesicle-associated protein OS=Danio rerio GN=camkv PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.053e-27
Identity = 72/219 (32.88%), Postives = 111/219 (50.68%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDD--------NNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYNARRRFRSA--IRAVQITQLLRKL-----HPGASAKPVSILSAVESEETSGENTTQPNTSNHSNEGSEPATHANSFKSPLESDSEEDTNTTAASS 616
            CGTP Y+APE++    YG+ VD W++GVI+YILL G PPFYD+        ++K LF +I+  +Y F  PYW  IS  AK+LVS+L+ VD ++RL A + + H W+   G                 + F  A   +AV++T ++++L        A+  P +  +A    E       Q      S   + P++ A S  + +E  + E  N  AAS+
Sbjct:  181 CGTPEYLAPEVVGRQRYGRPVDCWALGVIMYILLSGNPPFYDEADDDDYENHDKNLFRKILAGDYEFDSPYWDEISDSAKNLVSRLMEVDQDQRLTAQEAINHEWI--SGNAASDKNIKENVCAQIEKNFAKAKWKKAVRVTTMMKRLRAPENQTAAATAPAAEAAAASPSEADPAAGAQETPQAASEASTAPSSTAESLSASIEVPAVEPANAEAASA 397          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: DCLK2_MOUSE (Serine/threonine-protein kinase DCLK2 OS=Mus musculus GN=Dclk2 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.345e-27
Identity = 56/103 (54.37%), Postives = 73/103 (70.87%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNN--KKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED 307
            CGTP YVAPEI+  T YG +VD+W+ GVI YILLCGFPPF  +NN  + LF QI+     FP PYW NI+  AK+L+S++L V+   R  A +IL+HPW+ +D
Sbjct:  551 CGTPTYVAPEIIAETGYGLKVDVWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGEILSHPWVSDD 653          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: SRK1_SCHPO (Serine/threonine-protein kinase srk1 OS=Schizosaccharomyces pombe GN=srk1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.913e-27
Identity = 52/98 (53.06%), Postives = 67/98 (68.37%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            CGT GY APEI+R   Y K VD+W++G +LY +LCGFPPFYD++   L  ++    YSF  P+W +IS  AKDL+S LL VDP  R +  Q LAHPW+
Sbjct:  324 CGTMGYTAPEIVRDERYSKGVDMWALGCVLYTILCGFPPFYDESISLLTKKVSRGEYSFLSPWWDDISKSAKDLISHLLTVDPESRYDIHQFLAHPWI 421          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC1_SCHPO (Calcium/calmodulin-dependent protein kinase type I OS=Schizosaccharomyces pombe GN=cmk1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.913e-27
Identity = 60/139 (43.17%), Postives = 80/139 (57.55%), Query Frame = 2
Query:    2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYNARRRFRSAIRAVQITQLLRKL 418
            ACGTP Y+APE+ R T YGK VD+W+IGVI Y LL G+ PF   +  ++   I+   Y+F DP W+ IS  AKD + K L  DP+KRL A   L HP++ E               +NAR+ FR+A  AV+     +KL
Sbjct:  193 ACGTPEYMAPEVFRRTGYGKPVDMWAIGVITYFLLSGYTPFARPSQVEVIEAILANEYTFNDPCWSGISETAKDFIKKCLENDPSKRLTAADALKHPFLSEKRPATSNLLPNVRENFNARKTFRTAYNAVRAFNTWKKL 331          
The following BLAST results are available for this feature:
BLAST of CX300880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCLK1_MOUSE3.619e-2852.88Serine/threonine-protein kinase DCLK1 OS=Mus muscu... [more]
DCLK3_HUMAN4.726e-2857.69Serine/threonine-protein kinase DCLK3 OS=Homo sapi... [more]
KC2D2_DANRE6.172e-2834.31Calcium/calmodulin-dependent protein kinase type I... [more]
FHKC_DICDI6.172e-2858.49Probable serine/threonine-protein kinase fhkC OS=D... [more]
DCLK2_HUMAN8.061e-2855.34Serine/threonine-protein kinase DCLK2 OS=Homo sapi... [more]
CAMKV_XENLA8.061e-2834.95CaM kinase-like vesicle-associated protein OS=Xeno... [more]
CAMKV_DANRE1.053e-2732.88CaM kinase-like vesicle-associated protein OS=Dani... [more]
DCLK2_MOUSE2.345e-2754.37Serine/threonine-protein kinase DCLK2 OS=Mus muscu... [more]
SRK1_SCHPO8.913e-2753.06Serine/threonine-protein kinase srk1 OS=Schizosacc... [more]
KCC1_SCHPO8.913e-2743.17Calcium/calmodulin-dependent protein kinase type I... [more]

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Properties
Property NameValue
Genbank descriptionC08003C04SK PhyRootSw1 Citrus sinensis cDNA clone C08003C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300880 ID=CX300880; Name=CX300880; organism=Citrus sinensis; type=EST; length=630bp
AGCTTGTGGCACCCCAGGATATGTAGCTCCAGAAATTTTACGCGGTACGG
CCTACGGGAAACAAGTCGATCTATGGTCCATTGGTGTGATTCTATACATT
CTATTATGTGGGTTCCCACCTTTTTATGACGACAATAATAAAAAACTCTT
TGCTCAGATTATAAATGCAAATTATTCATTCCCTGATCCCTACTGGACGA
ATATTTCGCCATTAGCAAAAGATTTAGTATCAAAATTATTAATAGTCGAT
CCTAATAAACGATTAAATGCTGATCAGATTTTAGCTCATCCATGGATGCA
TGAAGACGGATCAAAATTATCATTAGATTTAAAATCGAATTTAAAATCAT
ATAATGCACGAAGAAGATTTAGATCAGCGATTAGAGCTGTACAAATAACA
CAATTATTACGAAAATTACATCCTGGTGCATCAGCAAAACCAGTTTCTAT
TCTCTCTGCAGTCGAATCAGAGGAAACGAGTGGTGAGAATACCACACAAC
CAAATACTAGCAATCATAGTAATGAAGGCAGTGAACCTGCAACACATGCA
AACTCTTTTAAATCACCTTTAGAATCTGATTCAGAAGAAGATACGAATAC
AACTGCTGCTAGTAGCATTGGGAATATAGG
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