CX300880

Overview
NameCX300880
Unique NameCX300880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PDPK1_RAT (3-phosphoinositide-dependent protein kinase 1 OS=Rattus norvegicus GN=Pdpk1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQ------ILAHPW 295
            GT  YV+PE+L   +  K  DLW++G I+Y L+ G PPF   N   +F +II   Y FP+ ++    P A+DLV KLL++D  KRL  ++      + AHP+
Sbjct:  247 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 344          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PDPK1_HUMAN (3-phosphoinositide-dependent protein kinase 1 OS=Homo sapiens GN=PDPK1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQ------ILAHPW 295
            GT  YV+PE+L   +  K  DLW++G I+Y L+ G PPF   N   +F +II   Y FP+ ++    P A+DLV KLL++D  KRL  ++      + AHP+
Sbjct:  244 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 341          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM---HED 307
            CG+P Y APE+ +G  Y G +VD+WS+GVILY L+ G  PF   N K+L  +++   Y  P      +S   ++L+ K LI++P+KR   +QI+   WM   HED
Sbjct:  210 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHED 310          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM---HED 307
            CG+P Y APE+ +G  Y G +VD+WS+GVILY L+ G  PF   N K+L  +++   Y  P      +S   ++L+ K LI++P+KR   +QI+   WM   HED
Sbjct:  210 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHED 310          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KSG1_SCHPO (Serine/threonine-protein kinase ksg1 OS=Schizosaccharomyces pombe GN=ksg1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMH 301
            GT  YV+PE+L     G   D+W+ G IL+ +L G PPF   N    F  I++ +Y  P     +IS +A DL+ KLL++DP  RL  D+I  HP+ +
Sbjct:  274 GTARYVSPEVLSDKIAGTASDIWAFGCILFQMLAGKPPFVAGNEYLTFQSILHLSYEIP----PDISDVASDLIKKLLVLDPKDRLTVDEIHQHPFFN 367          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CIPKQ_ORYSJ (CBL-interacting protein kinase 26 OS=Oryza sativa subsp. japonica GN=CIPK26 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 40/98 (40.82%), Postives = 59/98 (60.20%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPW 295
            CGTP YVAPE+L    Y G + D+WS GVIL++L+ G+ PF+D N  +++ +I  A Y  P     + S   KDL+ K+L  DP+ R++  +I    W
Sbjct:  172 CGTPAYVAPEVLSRRGYDGAKADIWSCGVILFVLVSGYLPFHDTNLIEMYRKIAKAEYKCP----RSFSAELKDLLYKILDPDPSTRISIPKIKRSAW 265          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CIPKE_ARATH (CBL-interacting serine/threonine-protein kinase 14 OS=Arabidopsis thaliana GN=CIPK14 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE 304
            CGTP YVAPE+L    Y G ++D+WS G+IL++L  G+ PF D N   ++ +I    +  P   WT  SP  + L+++LL  +P  R+  ++I+  PW  +
Sbjct:  182 CGTPAYVAPEVLAKKGYDGAKIDIWSCGIILFVLNAGYLPFNDHNLMVMYRKIYKGEFRIPK--WT--SPDLRRLLTRLLDTNPQTRITIEEIIHDPWFKQ 278          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 41/98 (41.84%), Postives = 58/98 (59.18%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPW 295
            CGTP YVAPE++    Y G   DLWS GVIL++LL G+ PF D+N   L+ +I  A ++ P   W   S  AK L++++L  +P  R+   Q+L   W
Sbjct:  180 CGTPNYVAPEVIEDKGYDGALADLWSCGVILFVLLAGYLPFEDENIVSLYNKISGAQFTCPS--W--FSAEAKRLIARILDPNPATRITTSQVLQDQW 273          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDR2_SCHPO (Mitosis inducer protein kinase cdr2 OS=Schizosaccharomyces pombe GN=cdr2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query:    2 ACGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            +CG+P Y +PEI+ G +Y G   D+WS G+I + LL G  PF DDN + L  ++    +  P    +NISP A+ L+ ++L VD + R+  +QI  HP++
Sbjct:  167 SCGSPHYASPEIIMGRSYDGCASDIWSCGIIFFALLTGKLPFDDDNIRSLLLKVCQGQFEMP----SNISPQAQHLLYRMLDVDSSTRITMEQIREHPFL 262          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: ARK1_SCHPO (Serine/threonine-protein kinase ark1 OS=Schizosaccharomyces pombe GN=ark1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14
Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYD-DNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            CGT  Y+ PE++ G  + ++VDLWS+GV+ Y  L G PPF D   +   + +I   +   P    + + P A+DL+S+LL  +P KR++ +Q++ HPW+
Sbjct:  246 CGTLDYLPPEMVEGKEHTEKVDLWSLGVLTYEFLVGAPPFEDMSGHSATYKRIAKVDLKIP----SFVPPDARDLISRLLQHNPEKRMSLEQVMRHPWI 340          
The following BLAST results are available for this feature:
BLAST of CX300880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PDPK1_RAT2.277e-1440.203-phosphoinositide-dependent protein kinase 1 OS=R... [more]
PDPK1_HUMAN2.277e-1440.203-phosphoinositide-dependent protein kinase 1 OS=H... [more]
MARK2_RAT2.277e-1440.95Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_HUMAN2.277e-1440.95Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
KSG1_SCHPO2.277e-1439.80Serine/threonine-protein kinase ksg1 OS=Schizosacc... [more]
CIPKQ_ORYSJ2.277e-1440.82CBL-interacting protein kinase 26 OS=Oryza sativa ... [more]
CIPKE_ARATH2.277e-1437.62CBL-interacting serine/threonine-protein kinase 14... [more]
CIPK3_ORYSJ2.277e-1441.84CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]
CDR2_SCHPO2.277e-1439.00Mitosis inducer protein kinase cdr2 OS=Schizosacch... [more]
ARK1_SCHPO2.277e-1437.37Serine/threonine-protein kinase ark1 OS=Schizosacc... [more]

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Properties
Property NameValue
Genbank descriptionC08003C04SK PhyRootSw1 Citrus sinensis cDNA clone C08003C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300880 ID=CX300880; Name=CX300880; organism=Citrus sinensis; type=EST; length=630bp
AGCTTGTGGCACCCCAGGATATGTAGCTCCAGAAATTTTACGCGGTACGG
CCTACGGGAAACAAGTCGATCTATGGTCCATTGGTGTGATTCTATACATT
CTATTATGTGGGTTCCCACCTTTTTATGACGACAATAATAAAAAACTCTT
TGCTCAGATTATAAATGCAAATTATTCATTCCCTGATCCCTACTGGACGA
ATATTTCGCCATTAGCAAAAGATTTAGTATCAAAATTATTAATAGTCGAT
CCTAATAAACGATTAAATGCTGATCAGATTTTAGCTCATCCATGGATGCA
TGAAGACGGATCAAAATTATCATTAGATTTAAAATCGAATTTAAAATCAT
ATAATGCACGAAGAAGATTTAGATCAGCGATTAGAGCTGTACAAATAACA
CAATTATTACGAAAATTACATCCTGGTGCATCAGCAAAACCAGTTTCTAT
TCTCTCTGCAGTCGAATCAGAGGAAACGAGTGGTGAGAATACCACACAAC
CAAATACTAGCAATCATAGTAATGAAGGCAGTGAACCTGCAACACATGCA
AACTCTTTTAAATCACCTTTAGAATCTGATTCAGAAGAAGATACGAATAC
AACTGCTGCTAGTAGCATTGGGAATATAGG
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