CX300880

Overview
NameCX300880
Unique NameCX300880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSI (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica GN=SAPK2 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDD----NNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPW 295
            GTP Y+APE+L    Y GK  D+WS GV LY++L G  PF D     N +K   +I++  Y  PD  +  +S   + L+S++ + +P +R+   +I  HPW
Sbjct:  161 GTPAYIAPEVLARKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQYMVPD--YVRVSMECRHLLSRIFVANPEQRITIPEIKNHPW 259          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PLK1_MOUSE (Serine/threonine-protein kinase PLK1 OS=Mus musculus GN=Plk1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQIL 283
            CGTP Y+APE+L    +  +VD+WSIG I+Y LL G PPF     K+ + +I    YS P     +I+P+A  L+ K+L  DP  R    ++L
Sbjct:  212 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTIHELL 300          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PAR1_CAEEL (Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMH 301
            CG+P Y APE+  G  Y G +VD+WS+GVILY L+ G  PF   N K+L  +++   Y  P      +S   ++L+ K L+++P +R + D I+   WM+
Sbjct:  327 CGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKKFLVINPQRRSSLDNIMKDRWMN 422          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PAR1_CAEBR (Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae GN=par-1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMH 301
            CG+P Y APE+  G  Y G +VD+WS+GVILY L+ G  PF   N K+L  +++   Y  P      +S   ++L+ K L+++P +R + D I+   WM+
Sbjct:  285 CGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKKFLVINPQRRSSLDNIMKDRWMN 380          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: NRC2_NEUCR (Serine/threonine-protein kinase nrc-2 OS=Neurospora crassa GN=nrc-2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWT-NISPLAKDLVSKLLIVDPNKRL----NADQILAHPW 295
            GT  Y+APE+++G+ +   VD W++G+++Y +L G  PF   N    FA I+  +  FPD      IS L K L+ KLLI D N+RL     A  I  HP+
Sbjct:  431 GTEEYIAPEVIKGSGHTSAVDWWTLGILIYEMLYGTTPFKGKNRNATFANILREDIPFPDHAGAPQISNLCKSLIRKLLIKDENRRLGARAGASDIKTHPF 531          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MYLK3_PONAB (Putative myosin light chain kinase 3 OS=Pongo abelii GN=MYLK3 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMH 301
            GTP ++APE++         D+WS+GVI Y+LL G  PF  + + +    I+N ++ F    +  +S  AKD VS+LL+ + + R++A Q L H W++
Sbjct:  674 GTPEFLAPEVVNYEFVSFPTDMWSVGVITYMLLSGLSPFLGETDAETMNFIVNCSWDFDADTFEGLSEEAKDFVSRLLVKEESCRMSATQCLKHEWLN 771          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MYLK3_HUMAN (Putative myosin light chain kinase 3 OS=Homo sapiens GN=MYLK3 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMH 301
            GTP ++APE++         D+WS+GVI Y+LL G  PF  + + +    I+N ++ F    +  +S  AKD VS+LL+ + + R++A Q L H W++
Sbjct:  674 GTPEFLAPEVVNYEFVSFPTDMWSVGVITYMLLSGLSPFLGETDAETMNFIVNCSWDFDADTFEGLSEEAKDFVSRLLVKEKSCRMSATQCLKHEWLN 771          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 38/98 (38.78%), Postives = 58/98 (59.18%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPW 295
            CGTP YVAPE+L    Y   +VD+WS GVIL++L+ G+ PF+D N   ++ +I    +  P  + T ++     L+SKLL  +P KR    +I+ + W
Sbjct:  186 CGTPAYVAPEVLARKGYDAAKVDIWSCGVILFVLMAGYLPFHDRNVMAMYKKIYRGEFRCPRWFSTELT----RLLSKLLETNPEKRFTFPEIMENSW 279          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: ATG1_CANGA (Serine/threonine-protein kinase ATG1 OS=Candida glabrata GN=ATG1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED 307
            CG+P Y+APEIL    Y  + DLWS+G +L+ + CG PPF   N+ +LF +I  A+     P    +    K+L+  LL  DP KR+  ++   +  + ED
Sbjct:  215 CGSPLYMAPEILNYQKYNAKADLWSVGTVLFEMCCGVPPFTASNHLELFKKIKRAHDEINFPEVCEVEDGLKELICSLLTFDPAKRIGFEEFFNNKIVTED 315          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: Y0700_DICDI (Probable serine/threonine-protein kinase DDB_G0286841 OS=Dictyostelium discoideum GN=DDB_G0286841 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13
Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYD-----------DNNKKLFAQIIN--ANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNA---DQILAHPWMHE 304
            GTP Y+ PE++ G  YGK +D WS+G+ILY  L G+PPF +           DN++K    I N   N+     +   + P+A DL+ KLL  +P+ RL A   D++  HP+  E
Sbjct:  246 GTPYYIPPEVILGKGYGKTIDWWSLGIILYEFLIGYPPFQEDEPNESINPKSDNDEKNVRIIFNKITNHKKKLYFPKKLYPVAIDLIEKLLDPNPSVRLGANGVDEVKCHPFFSE 360          
The following BLAST results are available for this feature:
BLAST of CX300880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SAPK2_ORYSI1.476e-1337.62Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]
PLK1_MOUSE1.476e-1340.86Serine/threonine-protein kinase PLK1 OS=Mus muscul... [more]
PAR1_CAEEL1.476e-1338.00Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
PAR1_CAEBR1.476e-1338.00Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
NRC2_NEUCR1.476e-1339.60Serine/threonine-protein kinase nrc-2 OS=Neurospor... [more]
MYLK3_PONAB1.476e-1335.71Putative myosin light chain kinase 3 OS=Pongo abel... [more]
MYLK3_HUMAN1.476e-1335.71Putative myosin light chain kinase 3 OS=Homo sapie... [more]
CIPKC_ARATH1.476e-1338.78CBL-interacting serine/threonine-protein kinase 12... [more]
ATG1_CANGA1.476e-1336.63Serine/threonine-protein kinase ATG1 OS=Candida gl... [more]
Y0700_DICDI1.928e-1337.39Probable serine/threonine-protein kinase DDB_G0286... [more]

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Properties
Property NameValue
Genbank descriptionC08003C04SK PhyRootSw1 Citrus sinensis cDNA clone C08003C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300880 ID=CX300880; Name=CX300880; organism=Citrus sinensis; type=EST; length=630bp
AGCTTGTGGCACCCCAGGATATGTAGCTCCAGAAATTTTACGCGGTACGG
CCTACGGGAAACAAGTCGATCTATGGTCCATTGGTGTGATTCTATACATT
CTATTATGTGGGTTCCCACCTTTTTATGACGACAATAATAAAAAACTCTT
TGCTCAGATTATAAATGCAAATTATTCATTCCCTGATCCCTACTGGACGA
ATATTTCGCCATTAGCAAAAGATTTAGTATCAAAATTATTAATAGTCGAT
CCTAATAAACGATTAAATGCTGATCAGATTTTAGCTCATCCATGGATGCA
TGAAGACGGATCAAAATTATCATTAGATTTAAAATCGAATTTAAAATCAT
ATAATGCACGAAGAAGATTTAGATCAGCGATTAGAGCTGTACAAATAACA
CAATTATTACGAAAATTACATCCTGGTGCATCAGCAAAACCAGTTTCTAT
TCTCTCTGCAGTCGAATCAGAGGAAACGAGTGGTGAGAATACCACACAAC
CAAATACTAGCAATCATAGTAATGAAGGCAGTGAACCTGCAACACATGCA
AACTCTTTTAAATCACCTTTAGAATCTGATTCAGAAGAAGATACGAATAC
AACTGCTGCTAGTAGCATTGGGAATATAGG
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