CX300880

Overview
NameCX300880
Unique NameCX300880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: DCLK3_MOUSE (Serine/threonine-protein kinase DCLK3 OS=Mus musculus GN=Dclk3 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.164e-26
Identity = 59/104 (56.73%), Postives = 69/104 (66.35%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFY--DDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDG 310
            CGTP YVAPEIL    YG +VD+W+ GVILYILLCGFPPF   + +  +LF  I    + F  PYW NIS  AKDLV  LL VDP KR  A+Q+L HPW+   G
Sbjct:  501 CGTPTYVAPEILSEKGYGLEVDMWAAGVILYILLCGFPPFRSPERDQDELFNIIQVGQFEFLSPYWDNISDAAKDLVRNLLEVDPKKRYTAEQVLQHPWIEMVG 604          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MYLKG_DICDI (Probable myosin light chain kinase DDB_G0275057 OS=Dictyostelium discoideum GN=DDB_G0275057 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26
Identity = 52/99 (52.53%), Postives = 69/99 (69.70%), Query Frame = 2
Query:    2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            +CGTP YVAPE+L G +Y   VD+WSIGVI YILLCGFPPFY  +   LF +I+ A+Y FP+P WT++S  AK  +  L++ DP++R  A Q L   W+
Sbjct:  215 SCGTPDYVAPEVLTGGSYDNAVDMWSIGVITYILLCGFPPFYASSQNLLFEKILTADYDFPEPEWTHVSEHAKAFIRNLIVKDPDQRHTAKQCLDDLWL 313          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KCC2_SCHPO (Calcium/calmodulin-dependent protein kinase type II OS=Schizosaccharomyces pombe GN=cmk2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.545e-26
Identity = 47/98 (47.96%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            CGT GY APEI+    Y K VD+W++G +L+ +LCGFPPF+D+N K L ++++N  + F  P+W +IS  AKDL++ LL VDP +R +  Q   HPW+
Sbjct:  254 CGTVGYAAPEIVNDELYSKNVDMWAMGCVLHTMLCGFPPFFDENIKDLASKVVNGEFEFLSPWWDDISDSAKDLITHLLTVDPRERYDIHQFFQHPWI 351          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KPSH1_DANRE (Serine/threonine-protein kinase H1 homolog OS=Danio rerio GN=pskh1 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.195e-25
Identity = 59/145 (40.69%), Postives = 79/145 (54.48%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYNARRRFRSAIRAVQITQLLRKLHPGASAK 439
            CGTP Y+APEIL    Y   VD+W++GVI YILL G  PF DDN  +L+ QI+   YSF    W ++S LAKD + ++L VDPN+RL+A Q L HPW+                  N  +R  S   + + +Q  R      S+K
Sbjct:  256 CGTPEYIAPEILVRKPYTNAVDMWALGVISYILLSGTMPFEDDNRMRLYRQILKGKYSFSGEPWPSVSNLAKDFIDRVLTVDPNERLSAGQALKHPWIVSMAASSSMKNLHRSISQNLLKRASSRCHSTKSSQSTRSSRSTKSSK 400          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.745e-25
Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            G+P YVAPE+LR  +YGK++D+WS GVILYILLCG PPF+ DN + +F +I+     F    W +IS  AKDLV K+L  DP +R+ A Q+L HPW+
Sbjct:  232 GSPYYVAPEVLR-QSYGKEIDIWSAGVILYILLCGVPPFWADNEEGVFVEILKCKIDFVREPWPSISDSAKDLVEKMLTEDPKRRITAAQVLEHPWI 327          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CAMKV_TAKRU (CaM kinase-like vesicle-associated protein OS=Takifugu rubripes GN=camkv PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.745e-25
Identity = 68/202 (33.66%), Postives = 100/202 (49.50%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDD--------NNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYNARRRFRSA--IRAVQITQLLRKLH-------------------------PGASAKPVSILSAVESEETSGENTTQPN 505
            CGTP Y+APE++    YG+ VD W+IGVI+YILL G PPFYDD         +K LF +I++ +Y F  PYW +IS  AK LV+ L+ VD ++RL A + +AH W+   G                 + F  A   +AV++T L+++L                          PG S    SI +A+  +    + +T P+
Sbjct:  179 CGTPEYLAPEVIGRQRYGRPVDCWAIGVIMYILLSGNPPFYDDGDEEDSDSRDKNLFLKILSGDYEFDSPYWDDISDSAKTLVASLMEVDQDQRLTAQEAIAHEWI--SGNAASDKNIKDGVCAQIEKNFAKAKWKKAVRVTTLMKRLRASEQGDTGASGLAAGATGGPPDPNMPGGSLLAASIKTALSEKAADAQTSTIPS 378          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: FHKE_DICDI (Probable serine/threonine-protein kinase fhkE OS=Dictyostelium discoideum GN=fhkE PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.342e-25
Identity = 51/103 (49.51%), Postives = 68/103 (66.02%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTA----YGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMH 301
            CGTP Y+APEIL  +     YG +VD WS+G ILYI+LCG+PPF D     +F QI NA + F    W+++S  AKDL+ +LL VDP+KR   + I+ HPW +
Sbjct:  310 CGTPQYLAPEILTSSGGHNGYGLEVDCWSMGAILYIMLCGYPPFDDSREVSIFEQIRNAKFEFDPEDWSSVSEEAKDLIKRLLCVDPHKRYTCNNIIQHPWFN 412          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: FHKD_DICDI (Probable serine/threonine-protein kinase fhkD OS=Dictyostelium discoideum GN=fhkD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.423e-24
Identity = 74/212 (34.91%), Postives = 103/212 (48.58%), Query Frame = 2
Query:    5 CGTPGYVAPEILRG-----------TAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINAN-YSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYNARRRFRSAIRAVQITQLLRKLHPGASAKPVSILSAVESEETSGENTTQPNTSNHSNEGSEPATHANSFKSPLESDSEEDTNTT 604
            CGTP YVAPEI+R            T YGK+VD+WS+G ILYILL G PPF  D+      ++IN   Y+F  P W  ++  AKDL+ KLL VDP KR++    L+H W ++D               N     +S  R+  + QL     P    K  +I   + S  T   NTT PN +N++N  +    +  +    L S+S    N +
Sbjct:  363 CGTPLYVAPEIIRNCLHGDGGAQVNTGYGKEVDVWSLGCILYILLSGRPPFDFDHTNNFNLKLINQGLYNFSLPVWDVVTENAKDLIKKLLNVDPTKRISTKGALSHDWFNDDDLLRCSTVIA-----NQSPISKSPQRSHGVVQL-----PVVDVKSKNIPMTLNSTTT---NTTSPNNNNNNNNNNNNKNNNKNIIKSLNSNSNNYNNNS 561          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CAMKV_HUMAN (CaM kinase-like vesicle-associated protein OS=Homo sapiens GN=CAMKV PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.423e-24
Identity = 64/203 (31.53%), Postives = 107/203 (52.71%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDD--------NNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYNARRRFRSA--IRAVQITQLLRKLHPGASAKPVSILSAVESEETSGENTTQPNTSNHSNEGSEPATHANSFKSPLESDS 583
            CGTP Y+APE++    YG+ VD W+IGVI+YILL G PPFY++        ++K LF +I+  +Y F  PYW +IS  AKDLV++L+ V+ ++R+ A++ ++H W+   G                 + F  A   +AV++T L+++L            +  +S   + ++ +  +T+     G   A  A+   S  E D+
Sbjct:  181 CGTPEYLAPEVVGRQRYGRPVDCWAIGVIMYILLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLMEVEQDQRITAEEAISHEWI--SGNAASDKNIKDGVCAQIEKNFARAKWKKAVRVTTLMKRLR-----------APEQSSTAAAQSASATDTATPGAAGGATAAAASGATSAPEGDA 370          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: DUN1_YEAST (DNA damage response protein kinase DUN1 OS=Saccharomyces cerevisiae GN=DUN1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.858e-24
Identity = 51/101 (50.50%), Postives = 65/101 (64.36%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDD-NNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE 304
            CGTP YVAPE+L    Y  +VDLWS GVILY+ LCGFPPF D      L  QI+ A Y+F  PYW  I      L+S LL+++P++R N D+ L HPW ++
Sbjct:  382 CGTPSYVAPEVLTKKGYTSKVDLWSAGVILYVCLCGFPPFSDQLGPPSLKEQILQAKYAFYSPYWDKIDDSVLHLISNLLVLNPDERYNIDEALNHPWFND 482          
The following BLAST results are available for this feature:
BLAST of CX300880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCLK3_MOUSE1.164e-2656.73Serine/threonine-protein kinase DCLK3 OS=Mus muscu... [more]
MYLKG_DICDI1.986e-2652.53Probable myosin light chain kinase DDB_G0275057 OS... [more]
KCC2_SCHPO7.545e-2647.96Calcium/calmodulin-dependent protein kinase type I... [more]
KPSH1_DANRE2.195e-2540.69Serine/threonine-protein kinase H1 homolog OS=Dani... [more]
CDPKN_ARATH3.745e-2553.61Calcium-dependent protein kinase 23 OS=Arabidopsis... [more]
CAMKV_TAKRU3.745e-2533.66CaM kinase-like vesicle-associated protein OS=Taki... [more]
FHKE_DICDI8.342e-2549.51Probable serine/threonine-protein kinase fhkE OS=D... [more]
FHKD_DICDI1.423e-2434.91Probable serine/threonine-protein kinase fhkD OS=D... [more]
CAMKV_HUMAN1.423e-2431.53CaM kinase-like vesicle-associated protein OS=Homo... [more]
DUN1_YEAST1.858e-2450.50DNA damage response protein kinase DUN1 OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionC08003C04SK PhyRootSw1 Citrus sinensis cDNA clone C08003C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300880 ID=CX300880; Name=CX300880; organism=Citrus sinensis; type=EST; length=630bp
AGCTTGTGGCACCCCAGGATATGTAGCTCCAGAAATTTTACGCGGTACGG
CCTACGGGAAACAAGTCGATCTATGGTCCATTGGTGTGATTCTATACATT
CTATTATGTGGGTTCCCACCTTTTTATGACGACAATAATAAAAAACTCTT
TGCTCAGATTATAAATGCAAATTATTCATTCCCTGATCCCTACTGGACGA
ATATTTCGCCATTAGCAAAAGATTTAGTATCAAAATTATTAATAGTCGAT
CCTAATAAACGATTAAATGCTGATCAGATTTTAGCTCATCCATGGATGCA
TGAAGACGGATCAAAATTATCATTAGATTTAAAATCGAATTTAAAATCAT
ATAATGCACGAAGAAGATTTAGATCAGCGATTAGAGCTGTACAAATAACA
CAATTATTACGAAAATTACATCCTGGTGCATCAGCAAAACCAGTTTCTAT
TCTCTCTGCAGTCGAATCAGAGGAAACGAGTGGTGAGAATACCACACAAC
CAAATACTAGCAATCATAGTAATGAAGGCAGTGAACCTGCAACACATGCA
AACTCTTTTAAATCACCTTTAGAATCTGATTCAGAAGAAGATACGAATAC
AACTGCTGCTAGTAGCATTGGGAATATAGG
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