CX300880

Overview
NameCX300880
Unique NameCX300880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MYLKF_DICDI (Probable myosin light chain kinase DDB_G0279831 OS=Dictyostelium discoideum GN=DDB_G0279831 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 55/138 (39.86%), Postives = 71/138 (51.45%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPY-WTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYNARRRFRSAIRAVQITQLLRK 415
            CGTP + APE+++   Y   VD+WS G+ILYILLCG PPF   NN  + + II    +F     W N+S  AKDL+ K+L  DP KRL A Q+L H W+                 Y   RR+ S     +I   L K
Sbjct:  770 CGTPEFQAPEMVKRLGYSYPVDIWSTGIILYILLCGHPPFQGKNNMIVMSLIIKGELNFDSSVGWDNVSESAKDLIRKMLNPDPEKRLTAQQVLLHEWITTSSDVNGSPQLGAPLFYKQLRRYNSQRHFEKIGDTLLK 907          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 47/101 (46.53%), Postives = 66/101 (65.35%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDG 310
            G+P YVAPE+LR   Y  + D+WS GVI+YILL G PPF+D+  + +F Q++  +  F    W ++S  AKDLV ++LI DP KR+   ++L HPW   DG
Sbjct:  297 GSPYYVAPEVLR-KHYSHECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGDLDFISEPWPSVSESAKDLVRRMLIRDPKKRMTTHEVLCHPWARVDG 396          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PHKG2_RAT (Phosphorylase b kinase gamma catalytic chain, testis/liver isoform OS=Rattus norvegicus GN=Phkg2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.875e-22
Identity = 51/103 (49.51%), Postives = 65/103 (63.11%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGT------AYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPW 295
            CGTPGY+APEIL+ +       YGK+VDLW+ GVIL+ LL G PPF+      +   I+   Y F  P W + S   KDL++KLL VDPN RL A+Q L HP+
Sbjct:  188 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSNTVKDLIAKLLQVDPNARLTAEQALQHPF 290          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PHKG1_RABIT (Phosphorylase b kinase gamma catalytic chain, skeletal muscle isoform OS=Oryctolagus cuniculus GN=PHKG1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.875e-22
Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGT------AYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE 304
            CGTP Y+APEI+  +       YGK+VD+WS GVI+Y LL G PPF+      +   I++ NY F  P W + S   KDLVS+ L+V P KR  A++ LAHP+  +
Sbjct:  185 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 290          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MAPK3_MOUSE (MAP kinase-activated protein kinase 3 OS=Mus musculus GN=Mapkapk3 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.875e-22
Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLF----AQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE 304
            C TP YVAPE+L    Y K  D+WS+GVI+YILLCGFPPFY +  + +      +I    YSFP+P W ++S  AK L+  LL  DP +RL   Q + HPW+++
Sbjct:  205 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYSFPNPEWLDVSEDAKQLIRLLLKTDPTERLTIMQFMNHPWINQ 308          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.875e-22
Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE 304
            G+  YVAPE+LR   YGK++D+WS GVILYILL G PPF+ +  K +F  I+     F    W +IS  AKDLV K+L  DP KR+ + Q+L HPW+ +
Sbjct:  248 GSAYYVAPEVLRRN-YGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILQGEIDFESQPWPSISESAKDLVRKMLTQDPKKRITSAQVLQHPWLRD 345          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.875e-22
Identity = 51/101 (50.50%), Postives = 67/101 (66.34%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDG 310
            G+  YVAPE+LR  +YGK++D+WS GVILYILL G PPF+ +  K +F  I++    F    W +IS  AKDLV K+L  DP KRL + Q+L H W+ E G
Sbjct:  228 GSAYYVAPEVLR-RSYGKEIDVWSAGVILYILLSGVPPFWAEIEKGIFDAILHEEIDFESQPWPSISESAKDLVRKMLTRDPKKRLTSAQVLQHQWLREGG 327          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PHKG2_MOUSE (Phosphorylase b kinase gamma catalytic chain, testis/liver isoform OS=Mus musculus GN=Phkg2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.061e-22
Identity = 51/103 (49.51%), Postives = 64/103 (62.14%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGT------AYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPW 295
            CGTPGY+APEIL+ +       YGK+VDLW+ GVIL+ LL G PPF+      +   I+   Y F  P W + S   KDL+SKLL VDP  RL A+Q L HP+
Sbjct:  188 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFTSPEWDDCSNTVKDLISKLLQVDPEARLTAEQALQHPF 290          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MAPK3_HUMAN (MAP kinase-activated protein kinase 3 OS=Homo sapiens GN=MAPKAPK3 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.061e-22
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLF----AQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE 304
            C TP YVAPE+L    Y K  D+WS+GVI+YILLCGFPPFY +  + +      +I    Y FP+P W+ +S  AK L+  LL  DP +RL   Q + HPW+++
Sbjct:  203 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 306          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.061e-22
Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDG 310
            G+  YVAPE+L+   YGK++D+WS G+ILYILL G PPF+ +  K +F  I+     F    W +IS  AKDLV ++L  DP +R++A ++L HPW+ E G
Sbjct:  236 GSAYYVAPEVLK-RRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWPSISNSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGG 335          
The following BLAST results are available for this feature:
BLAST of CX300880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MYLKF_DICDI2.967e-2239.86Probable myosin light chain kinase DDB_G0279831 OS... [more]
CDPKK_ARATH2.967e-2246.53Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
PHKG2_RAT3.875e-2249.51Phosphorylase b kinase gamma catalytic chain, test... [more]
PHKG1_RABIT3.875e-2245.28Phosphorylase b kinase gamma catalytic chain, skel... [more]
MAPK3_MOUSE3.875e-2247.12MAP kinase-activated protein kinase 3 OS=Mus muscu... [more]
CDPK2_ORYSJ3.875e-2249.49Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CDPK2_MAIZE3.875e-2250.50Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]
PHKG2_MOUSE5.061e-2249.51Phosphorylase b kinase gamma catalytic chain, test... [more]
MAPK3_HUMAN5.061e-2246.15MAP kinase-activated protein kinase 3 OS=Homo sapi... [more]
CDPKX_ARATH5.061e-2246.53Calcium-dependent protein kinase 33 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC08003C04SK PhyRootSw1 Citrus sinensis cDNA clone C08003C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300880 ID=CX300880; Name=CX300880; organism=Citrus sinensis; type=EST; length=630bp
AGCTTGTGGCACCCCAGGATATGTAGCTCCAGAAATTTTACGCGGTACGG
CCTACGGGAAACAAGTCGATCTATGGTCCATTGGTGTGATTCTATACATT
CTATTATGTGGGTTCCCACCTTTTTATGACGACAATAATAAAAAACTCTT
TGCTCAGATTATAAATGCAAATTATTCATTCCCTGATCCCTACTGGACGA
ATATTTCGCCATTAGCAAAAGATTTAGTATCAAAATTATTAATAGTCGAT
CCTAATAAACGATTAAATGCTGATCAGATTTTAGCTCATCCATGGATGCA
TGAAGACGGATCAAAATTATCATTAGATTTAAAATCGAATTTAAAATCAT
ATAATGCACGAAGAAGATTTAGATCAGCGATTAGAGCTGTACAAATAACA
CAATTATTACGAAAATTACATCCTGGTGCATCAGCAAAACCAGTTTCTAT
TCTCTCTGCAGTCGAATCAGAGGAAACGAGTGGTGAGAATACCACACAAC
CAAATACTAGCAATCATAGTAATGAAGGCAGTGAACCTGCAACACATGCA
AACTCTTTTAAATCACCTTTAGAATCTGATTCAGAAGAAGATACGAATAC
AACTGCTGCTAGTAGCATTGGGAATATAGG
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