CX300880

Overview
NameCX300880
Unique NameCX300880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MYLKE_DICDI (Probable myosin light chain kinase DDB_G0284661 OS=Dictyostelium discoideum GN=DDB_G0284661 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22
Identity = 66/202 (32.67%), Postives = 92/202 (45.54%), Query Frame = 2
Query:    2 ACGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHEDGXXXXXXXXXXXXXYNARRRFRSAIRAVQITQLLRKLHPGASAKPVSILSAVESEETSGENTTQPNTSN--HSNEGSEPATHANSFKS-PLESDSEEDTN 598
            ACGT  Y APEI     Y K VD+WS G ILY +L G PPFY D+  ++F  I    + FP       S   KDL+  LL  DPNKRL   Q LAH W+                   ++++ + +  ++ ++          S KP+S L A+  ++    N  Q    N  HS+       HA+S  S  ++   EED N
Sbjct:  171 ACGTLAYSAPEITNNQVYRKSVDMWSCGCILYFILFGRPPFYSDDESEMFELITKGQWEFPSKTQHKYSDQVKDLIKLLLENDPNKRLTVKQSLAHKWIQSIDERSFSSVIKQSPLITSQQQQQQSPSSL-LSSSSSSTASSPSLKPLSPLVAIIEQQEYNYNHQQLQNHNILHSSNSHSRHHHASSANSTTVDQQQEEDNN 371          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MAPK3_BOVIN (MAP kinase-activated protein kinase 3 OS=Bos taurus GN=MAPKAPK3 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22
Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLF----AQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE 304
            C TP YVAPE+L    Y K  D+WS+GVI+YILLCGFPPFY +  + +      +I    Y FP P W+ +S  AK L+  LL  DP +RL   Q + HPW+++
Sbjct:  205 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPSPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 308          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: KPSH2_HUMAN (Serine/threonine-protein kinase H2 OS=Homo sapiens GN=PSKH2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21
Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWM 298
            CGTP Y+APE+L    Y   VD+W++GVI Y LL GF PF D++  +L+ +I+   Y++    W +IS LAKD + KLLI++   R++A Q L HPW+
Sbjct:  223 CGTPEYIAPEVLLRKPYTSAVDMWALGVITYALLSGFLPFDDESQTRLYRKILKGKYNYTGEPWPSISHLAKDFIDKLLILEAGHRMSAGQALDHPWV 320          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: DAPK1_HUMAN (Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=5)

HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21
Identity = 57/166 (34.34%), Postives = 84/166 (50.60%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED------GXXXXXXXXXXXXXYNARRRFRSAIRAVQITQLLRKLHPGASAKPVSILSAVESEETSGE 487
            GTP +VAPEI+     G + D+WSIGVI YILL G  PF  D  ++  A +   NY F D Y++N S LAKD + +LL+ DP KR+     L HPW+                       + AR++++ ++R + + Q L +     S    S +S   S++T  E
Sbjct:  179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAARKKWKQSVRLISLCQRLSR-----SFLSRSNMSVARSDDTLDE 339          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21
Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAY-GKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED 307
            CGTP YVAPE+LR   Y G + D+WS G+ILY+LL GF PF D+N  K++ +I  + + +P   W   SP +K L+SKLL+VDPNKR++   I+  PW  ++
Sbjct:  203 CGTPAYVAPEVLRKKGYDGAKGDIWSCGIILYVLLAGFLPFQDENLMKMYRKIFKSEFEYPP--W--FSPESKRLISKLLVVDPNKRISIPAIMRTPWFRKN 300          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PHKG2_HUMAN (Phosphorylase b kinase gamma catalytic chain, testis/liver isoform OS=Homo sapiens GN=PHKG2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 50/103 (48.54%), Postives = 64/103 (62.14%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGT------AYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPW 295
            CGTPGY+APEIL+ +       YGK+VDLW+ GVIL+ LL G PPF+      +   I+   Y F  P W + S   KDL+S+LL VDP  RL A+Q L HP+
Sbjct:  188 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPF 290          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PHKG1_HUMAN (Phosphorylase b kinase gamma catalytic chain, skeletal muscle isoform OS=Homo sapiens GN=PHKG1 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 47/106 (44.34%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGT------AYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE 304
            CGTP Y+APEI+  +       YGK+VD+WS GVI+Y LL G PPF+      +   I++ NY F  P W + S   KDLVS+ L+V P  R  A++ LAHP+  +
Sbjct:  185 CGTPSYLAPEIIECSMNEDHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQNRYTAEEALAHPFFQQ 290          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: MAPK3_RAT (MAP kinase-activated protein kinase 3 OS=Rattus norvegicus GN=Mapkapk3 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLF----AQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHE 304
            C TP YVAPE+L    Y K  D+WS+GVI+YILLCGFPPFY +  + +      +I    Y FP P W ++S  AK L+  LL  DP +RL   Q + HPW+++
Sbjct:  205 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPKPEWADVSEDAKQLIRLLLKTDPTERLTIMQFMNHPWINQ 308          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 2
Query:    8 GTPGYVAPEILRGTAYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPWMHED 307
            G+  YVAPE+L    YG + D+WS GVILYILLCGFPPF+ ++   +F +I+     F    W +IS  AKDL+ K+L  +P KRL A Q+L HPW+ +D
Sbjct:  185 GSAYYVAPEVLH-KHYGPECDVWSAGVILYILLCGFPPFWAESEIGIFRKILQGKLEFEINPWPSISESAKDLIKKMLESNPKKRLTAHQVLCHPWIVDD 283          
BLAST of CX300880 vs. ExPASy Swiss-Prot
Match: PHKG2_BOVIN (Phosphorylase b kinase gamma catalytic chain, testis/liver isoform OS=Bos taurus GN=PHKG2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.923e-21
Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 2
Query:    5 CGTPGYVAPEILRGT------AYGKQVDLWSIGVILYILLCGFPPFYDDNNKKLFAQIINANYSFPDPYWTNISPLAKDLVSKLLIVDPNKRLNADQILAHPW 295
            CGTPGY+APEIL+ +       YGK+VDLW+ GVIL+ LL G PPF+      +   I+   Y F  P W + S   KDL+S+LL VDP +RL A+Q L HP+
Sbjct:  188 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSDTVKDLISRLLQVDPVERLTAEQALQHPF 290          
The following BLAST results are available for this feature:
BLAST of CX300880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MYLKE_DICDI6.610e-2232.67Probable myosin light chain kinase DDB_G0284661 OS... [more]
MAPK3_BOVIN6.610e-2246.15MAP kinase-activated protein kinase 3 OS=Bos tauru... [more]
KPSH2_HUMAN1.127e-2145.92Serine/threonine-protein kinase H2 OS=Homo sapiens... [more]
DAPK1_HUMAN1.127e-2134.34Death-associated protein kinase 1 OS=Homo sapiens ... [more]
CIPKP_ARATH1.127e-2148.04CBL-interacting serine/threonine-protein kinase 25... [more]
PHKG2_HUMAN1.473e-2148.54Phosphorylase b kinase gamma catalytic chain, test... [more]
PHKG1_HUMAN1.473e-2144.34Phosphorylase b kinase gamma catalytic chain, skel... [more]
MAPK3_RAT1.473e-2146.15MAP kinase-activated protein kinase 3 OS=Rattus no... [more]
CDPKC_ARATH1.473e-2149.00Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
PHKG2_BOVIN1.923e-2148.54Phosphorylase b kinase gamma catalytic chain, test... [more]

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Properties
Property NameValue
Genbank descriptionC08003C04SK PhyRootSw1 Citrus sinensis cDNA clone C08003C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300880 ID=CX300880; Name=CX300880; organism=Citrus sinensis; type=EST; length=630bp
AGCTTGTGGCACCCCAGGATATGTAGCTCCAGAAATTTTACGCGGTACGG
CCTACGGGAAACAAGTCGATCTATGGTCCATTGGTGTGATTCTATACATT
CTATTATGTGGGTTCCCACCTTTTTATGACGACAATAATAAAAAACTCTT
TGCTCAGATTATAAATGCAAATTATTCATTCCCTGATCCCTACTGGACGA
ATATTTCGCCATTAGCAAAAGATTTAGTATCAAAATTATTAATAGTCGAT
CCTAATAAACGATTAAATGCTGATCAGATTTTAGCTCATCCATGGATGCA
TGAAGACGGATCAAAATTATCATTAGATTTAAAATCGAATTTAAAATCAT
ATAATGCACGAAGAAGATTTAGATCAGCGATTAGAGCTGTACAAATAACA
CAATTATTACGAAAATTACATCCTGGTGCATCAGCAAAACCAGTTTCTAT
TCTCTCTGCAGTCGAATCAGAGGAAACGAGTGGTGAGAATACCACACAAC
CAAATACTAGCAATCATAGTAATGAAGGCAGTGAACCTGCAACACATGCA
AACTCTTTTAAATCACCTTTAGAATCTGATTCAGAAGAAGATACGAATAC
AACTGCTGCTAGTAGCATTGGGAATATAGG
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