EY702460

Overview
NameEY702460
Unique NameEY702460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_METM7 (Pyridoxal biosynthesis lyase pdxS OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pdxS PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.188e-15
Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHV 192
            HI+K  F  PF+CG RNLGEALRRI +GA ++RT GEAGTGN++EAV+H+
Sbjct:  115 HIDKRAFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNVVEAVKHM 164

HSP 2 Score: 26.1794 bits (56), Expect = 3.188e-15
Identity = 12/46 (26.09%), Postives = 19/46 (41.30%), Query Frame = 3 
Query:  252 LSQTTYAAPHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQLAC 389
            +++     P  L+    +L RLP V+F             MMQ+ C
Sbjct:  189 MARNELKVPMELISEVAELKRLPVVNFAAGGIATPADAALMMQMGC 234
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_METM6 (Pyridoxal biosynthesis lyase pdxS OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pdxS PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.188e-15
Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHV 192
            HI+K  F  PF+CG RNLGEALRRI +GA ++RT GEAGTGN++EAV+H+
Sbjct:  115 HIDKRAFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNVVEAVKHM 164

HSP 2 Score: 26.1794 bits (56), Expect = 3.188e-15
Identity = 12/46 (26.09%), Postives = 19/46 (41.30%), Query Frame = 3 
Query:  252 LSQTTYAAPHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQLAC 389
            +++     P  L+    +L RLP V+F             MMQ+ C
Sbjct:  189 MARNELKVPMELISEVAELKRLPVVNFAAGGIATPADAALMMQMGC 234
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_METM5 (Pyridoxal biosynthesis lyase pdxS OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pdxS PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.188e-15
Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHV 192
            HI+K  F  PF+CG RNLGEALRRI +GA ++RT GEAGTGN++EAV+H+
Sbjct:  115 HIDKRAFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNVVEAVKHM 164

HSP 2 Score: 26.1794 bits (56), Expect = 3.188e-15
Identity = 12/46 (26.09%), Postives = 19/46 (41.30%), Query Frame = 3 
Query:  252 LSQTTYAAPHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQLAC 389
            +++     P  L+    +L RLP V+F             MMQ+ C
Sbjct:  189 MARNELKVPMELISEVAELKRLPVVNFAAGGIATPADAALMMQMGC 234
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_METVS (Pyridoxal biosynthesis lyase pdxS OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pdxS PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.142e-15
Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHV 192
            HINK  F  PF+CG RNLGEALRRI +GA ++RT GEAGTGN++EAV+H+
Sbjct:  115 HINKKAFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNVVEAVKHM 164

HSP 2 Score: 24.2534 bits (51), Expect = 4.142e-15
Identity = 11/46 (23.91%), Postives = 19/46 (41.30%), Query Frame = 3 
Query:  252 LSQTTYAAPHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQLAC 389
            +++     P  ++    +L RLP V+F             MMQ+ C
Sbjct:  189 MARNELKVPMEIILEVAKLKRLPVVNFAAGGIATPADAALMMQMGC 234
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_BACLD (Pyridoxal biosynthesis lyase pdxS OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pdxS PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.144e-15
Identity = 33/50 (66.00%), Postives = 43/50 (86.00%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHV 192
            H+NK+ F +PF+CGCR+LGEA RRI +GA ++RT GE GTGNI+EAVRH+
Sbjct:  115 HLNKNEFTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHM 164

HSP 2 Score: 23.0978 bits (48), Expect = 4.144e-15
Identity = 13/37 (35.14%), Postives = 16/37 (43.24%), Query Frame = 3 
Query:  273 APHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQL 383
            AP+ LL+      RLP V+F             MMQL
Sbjct:  191 APYELLKEIKAEGRLPVVNFAAGGVATPADAALMMQL 227
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_BACCN (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pdxS PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.144e-15
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHVPPCMGDITVPTN 228
            H+NK ++ +PF+CGCR++GEA RRI +GA ++RT GE GTGNI+EAVRH+     +I    N
Sbjct:  116 HLNKRDYTVPFVCGCRDIGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRQVNAEIRQVAN 177

HSP 2 Score: 24.6386 bits (52), Expect = 4.144e-15
Identity = 16/44 (36.36%), Postives = 20/44 (45.45%), Query Frame = 3 
Query:  264 TYA----APHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQL 383
            TYA    AP+ +L    +L RLP V+F             MMQL
Sbjct:  185 TYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQL 228
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_METVA (Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Methanococcus vannielii GN=pdxS PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.174e-15
Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHV 192
            HINK  F  PF+CG RNLGEALRRI +GA ++RT GEAGTGN++EAV+H+
Sbjct:   53 HINKKAFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNVVEAVKHM 102

HSP 2 Score: 24.2534 bits (51), Expect = 4.174e-15
Identity = 11/46 (23.91%), Postives = 19/46 (41.30%), Query Frame = 3 
Query:  252 LSQTTYAAPHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQLAC 389
            +++     P  ++    +L RLP V+F             MMQ+ C
Sbjct:  127 MARNELKVPMEIILEVAKLKRLPVVNFAAGGIATPADAALMMQMGC 172
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_BACWK (Pyridoxal biosynthesis lyase pdxS OS=Bacillus weihenstephanensis (strain KBAB4) GN=pdxS PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.385e-15
Identity = 31/50 (62.00%), Postives = 43/50 (86.00%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHV 192
            H+NK ++ +PF+CGCR++GEA RRI +GA ++RT GE GTGNI+EAVRH+
Sbjct:  116 HLNKRDYTVPFVCGCRDIGEAARRIAEGAAMLRTKGEPGTGNIVEAVRHM 165

HSP 2 Score: 24.6386 bits (52), Expect = 5.385e-15
Identity = 16/44 (36.36%), Postives = 20/44 (45.45%), Query Frame = 3 
Query:  264 TYA----APHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQL 383
            TYA    AP+ +L    +L RLP V+F             MMQL
Sbjct:  185 TYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQL 228
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_BACHK (Pyridoxal biosynthesis lyase pdxS OS=Bacillus thuringiensis subsp. konkukian GN=pdxS PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.385e-15
Identity = 31/50 (62.00%), Postives = 43/50 (86.00%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHV 192
            H+NK ++ +PF+CGCR++GEA RRI +GA ++RT GE GTGNI+EAVRH+
Sbjct:  116 HLNKRDYTVPFVCGCRDIGEAARRIAEGASMLRTKGEPGTGNIVEAVRHM 165

HSP 2 Score: 24.6386 bits (52), Expect = 5.385e-15
Identity = 16/44 (36.36%), Postives = 20/44 (45.45%), Query Frame = 3 
Query:  264 TYA----APHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQL 383
            TYA    AP+ +L    +L RLP V+F             MMQL
Sbjct:  185 TYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQL 228
[Close]
BLAST of EY702460 vs. ExPASy Swiss-Prot
Match: PDXS_BACCZ (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus (strain ZK / E33L) GN=pdxS PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.385e-15
Identity = 31/50 (62.00%), Postives = 43/50 (86.00%), Query Frame = 1 
Query:   43 HINKHNFRIPFLCGCRNLGEALRRIRQGAGVVRTHGEAGTGNIIEAVRHV 192
            H+NK ++ +PF+CGCR++GEA RRI +GA ++RT GE GTGNI+EAVRH+
Sbjct:  116 HLNKRDYTVPFVCGCRDIGEAARRIAEGASMLRTKGEPGTGNIVEAVRHM 165

HSP 2 Score: 24.6386 bits (52), Expect = 5.385e-15
Identity = 16/44 (36.36%), Postives = 20/44 (45.45%), Query Frame = 3 
Query:  264 TYA----APHHLLQPTTQLARLPAVHFRXXXXXXXXXXXXMMQL 383
            TYA    AP+ +L    +L RLP V+F             MMQL
Sbjct:  185 TYAKNTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQL 228
The following BLAST results are available for this feature:
BLAST of EY702460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
PDXS_METM73.188e-1566.00Pyridoxal biosynthesis lyase pdxS OS=Methanococcus... [more]
PDXS_METM63.188e-1566.00Pyridoxal biosynthesis lyase pdxS OS=Methanococcus... [more]
PDXS_METM53.188e-1566.00Pyridoxal biosynthesis lyase pdxS OS=Methanococcus... [more]
PDXS_METVS4.142e-1568.00Pyridoxal biosynthesis lyase pdxS OS=Methanococcus... [more]
PDXS_BACLD4.144e-1566.00Pyridoxal biosynthesis lyase pdxS OS=Bacillus lich... [more]
PDXS_BACCN4.144e-1553.23Pyridoxal biosynthesis lyase pdxS OS=Bacillus cere... [more]
PDXS_METVA4.174e-1568.00Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Me... [more]
PDXS_BACWK5.385e-1562.00Pyridoxal biosynthesis lyase pdxS OS=Bacillus weih... [more]
PDXS_BACHK5.385e-1562.00Pyridoxal biosynthesis lyase pdxS OS=Bacillus thur... [more]
PDXS_BACCZ5.385e-1562.00Pyridoxal biosynthesis lyase pdxS OS=Bacillus cere... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-B12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702460 ID=EY702460; Name=EY702460; organism=Citrus sinensis; type=EST; length=856bp
CCACGCGTCCGGCGAAGTCTTGACTCCCGCCGACCAAGAGATCACATCAA
CAAGCACAACTTTCGTATCCCCTTCCTATGCGGCTGCCGGAACTTGGGGG
AAGCTTTGAGGAGGATTCGCCAAGGCGCGGGGGTGGTAAGAACGCACGGC
GAGGCCGGAACGGGGAATATTATCGAAGCGGTGAGGCACGTGCCGCCCTG
CATGGGGGATATTACGGTTCCGACGAACCACGGACGATGACCACGCGCTC
CCTTTCCCAAACAACATACGCGGCGCCCCACCACTTGCTGCAGCCCACCA
CGCAGCTGGCGCGGTTGCCCGCGGTGCACTTCCGAGCGGGAGGAGCGGGG
ACCCCGGCGGATCCAGCGACGATGATGCAACTTGCATGCCGACGGAGTCT
CTGCCCGCCCGGGCGCCCTCAAGAGCCGCGACCCCCCCAAGCGCCCCCAC
CCCCTCCGACCCCCGGCGCCCACTACAGTGACCCGGAGGTGCGGGGGGAC
GCGGCCTGCCGCGCCGCGCCAGGCCCCCGCCGGTCCCACTTTGAGCGACC
ACAAGGGGTTACGGTCGCCTAGCCCCCCCCATACCCGACCCACACCACCG
CCCCCGCCCCGCCATCCATGCACCACCCCATCTCTACCGCCCGCCCTCCG
GGCGGCGGACCCCCTCCCAACTTCACAAAGCCTCCTCGTTGCCCCTCCCC
GCCCCCCCCCCCCTCTCCAGCAACATACCTCACCCCCTCCCCCACGCGTC
GCGCTCCCCGCGATCCCCCCGGCTGCACCTCACTACTCCGCCTCCCCCCC
CCGCCCCCCCCCCCGCCTCCCCCCGACCACCCCCCCCGCCGCCCTTCCCC
CCCCCC
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