CX300853
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_ACISJ (Nucleoside diphosphate kinase OS=Acidovorax sp. (strain JS42) GN=ndk PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.950e-16 Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 254 RPFF L++++ SGPV+ EGE V R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E+A +FP Sbjct: 57 RPFFKDLVDFMISGPVMVQALEGENAVLKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVAFFFP 134
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_THIDA (Nucleoside diphosphate kinase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=ndk PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 254 RPFF L++++ SGPVV + EGE + RT++GAT+P ++ PGTIR D A N +HGSD+ E+A EIA +FP Sbjct: 57 RPFFKDLVDFMVSGPVVLQVLEGEDAIAKNRTLMGATDPKKAEPGTIRADFAESIDANAVHGSDAPETAAVEIAYFFP 134
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_SILPO (Nucleoside diphosphate kinase OS=Silicibacter pomeroyi GN=ndk PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 251 RPF+ L E+++S PVV + EGE + R ++GATNPA +APGTIR + A G N +HGSD+ E+A EIA +F Sbjct: 57 RPFYDELCEFMSSAPVVVQVLEGENAIAKNREVMGATNPADAAPGTIRAEFAESVGENSVHGSDAPETAAVEIAYFF 133
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_PSEF5 (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ndk PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 6 AEFGTRPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 251 AE R FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 52 AEHSERGFFGELVAFMTSGPVVVQVLEGENAIVRNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_PERMH (Nucleoside diphosphate kinase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=ndk PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 251 RPF+ L E+++SGP+VAM+WEGE + R I+GATNP ++ GT+R G N +HGSDS ESA+ EI +F Sbjct: 57 RPFYDELCEFMSSGPIVAMVWEGENAISRIREIMGATNPEEAEEGTLRKLYGTNVGENAVHGSDSPESAKVEIPFFF 133
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_HAEIN (Nucleoside diphosphate kinase OS=Haemophilus influenzae GN=ndk PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 6 AEFGTRPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 266 AE + FF L+EY+ S P+V + E E VK RT+IG TNP +A GTIR D A+ N +HGSDS+ESA +EIA +F + I Sbjct: 52 AEHQGKEFFVPLVEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETAAEGTIRKDFALSQRENSVHGSDSIESANREIAYFFTNSEI 138
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_CLOTH (Nucleoside diphosphate kinase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=ndk PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 257 +PFF +I+YITSGPVV M+ G V++ R+++GAT+ S PGTIRGD N+IH SDS ESA+ EI +FP+ Sbjct: 55 KPFFNDMIDYITSGPVVVMVLSGYRVIEAVRSMVGATSNFDSKPGTIRGDYGYHRFENLIHASDSCESAEIEIKRFFPE 133
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_BORPE (Nucleoside diphosphate kinase OS=Bordetella pertussis GN=ndk PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 257 RPFF L++++ SGPV + EGE ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 57 RPFFKDLVDFMVSGPVFVQVLEGESAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_BORPA (Nucleoside diphosphate kinase OS=Bordetella parapertussis GN=ndk PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 257 RPFF L++++ SGPV + EGE ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 57 RPFFKDLVDFMVSGPVFVQVLEGESAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_BORBR (Nucleoside diphosphate kinase OS=Bordetella bronchiseptica GN=ndk PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 257 RPFF L++++ SGPV + EGE ++ R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +FP+ Sbjct: 57 RPFFKDLVDFMVSGPVFVQVLEGESAIQKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135 The following BLAST results are available for this feature:
BLAST of CX300853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300853 ID=CX300853; Name=CX300853; organism=Citrus sinensis; type=EST; length=532bpback to top |