CX300853
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_ARCFU (Nucleoside diphosphate kinase OS=Archaeoglobus fulgidus GN=ndk PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.317e-28 Identity = 56/100 (56.00%), Postives = 77/100 (77.00%), Query Frame = 3 Query: 6 AEFGTRPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 302 AE +PFF +L++YITSGPVVAM+ EG+ +K RT++GATNPA++APGTIRGD + GRN++H SDS +SA++EI+L+F D I NW+ + WIYE Sbjct: 50 AEHREKPFFSALVDYITSGPVVAMVVEGKNAIKVVRTLVGATNPAEAAPGTIRGDFGLDVGRNVVHASDSPQSAEREISLFFSDDEIVNWEKADEDWIYE 149
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_GLOVI (Nucleoside diphosphate kinase OS=Gloeobacter violaceus GN=ndk PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.638e-28 Identity = 60/100 (60.00%), Postives = 74/100 (74.00%), Query Frame = 3 Query: 6 AEFGTRPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 302 AE RPFFG L+ +ITS PVVA++ EG+GVV T R ++G TNP S GTIRGD I GRNIIHGSDS+ESA++EIALWF P + WQ++L W+YE Sbjct: 50 AEHKERPFFGGLVAFITSSPVVAVVLEGKGVVATARAMMGVTNPLNSPLGTIRGDYGIDIGRNIIHGSDSLESAEREIALWFAPAELLEWQATLGSWVYE 149
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.638e-28 Identity = 58/95 (61.05%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 302 + FF LIEYITSGPVV+M WEG GVV + R +IGAT+P Q+ PGTIRGD A+ TGRNIIHGSDS E+ ++EIALWF +G + W PW+ E Sbjct: 136 KSFFPKLIEYITSGPVVSMAWEGVGVVPSARKLIGATDPLQAEPGTIRGDFAVQTGRNIIHGSDSPENGEREIALWFKEGELCEWTPVQEPWLRE 230
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 5.638e-28 Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = 3 Query: 9 EFGTRPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 302 + + FF +LIEYITSGPVV M WEG GVV + R +IG T+P Q+ PGTIRGDLA+ TGRNI+HGSDS E+ ++EI LWF +G + W S+L W+ E Sbjct: 133 DLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALATWLRE 231
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_SYNP2 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndk PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.256e-27 Identity = 54/95 (56.84%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 302 RPFFGSL+E+I S PVVAM+WEG+G + R IIGATNP ++ PGTIRGD + GRN+IHGSD ++A EIALWF + + NW+ + W+YE Sbjct: 55 RPFFGSLVEFIISVPVVAMVWEGKGAIAAARKIIGATNPLEAEPGTIRGDFGVDIGRNLIHGSDGPDTAASEIALWFSESELANWEPATKAWLYE 149
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDKC_DICDI (Nucleoside diphosphate kinase, cytosolic OS=Dictyostelium discoideum GN=ndkC-1 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.640e-27 Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 3 Query: 6 AEFGTRPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 302 AE RPFFG L+ +ITSGPVVAM++EG+GVV + R +IG TNP SAPG+IRGD + GRNIIHGSDSVESA +EIALWF + + +P +YE Sbjct: 57 AEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPNPNLYE 155
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.640e-27 Identity = 53/94 (56.38%), Postives = 74/94 (78.72%), Query Frame = 3 Query: 21 RPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 299 RPFF L ++++SGPV+AM+WEG+GV++ GR +IGAT+P +S PGTIRGDLA+ GRNIIHGSD E+A+ EI+LWF P +++ S+ W+Y Sbjct: 142 RPFFNGLCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGPETAKDEISLWFKPQELVSYTSNSEKWLY 235
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_THEEB (Nucleoside diphosphate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ndk PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.142e-27 Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = 3 Query: 9 EFGTRPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 302 E +PFF L+ +ITSGPVVAM+WEG GV+ R +IGATNP + PGT+RGD A+ GRN+IHGSDS E+A++EI LWF + W+ +L W+YE Sbjct: 51 EHKDKPFFPGLVNFITSGPVVAMVWEGRGVIANARKLIGATNPLNAEPGTLRGDFAVDVGRNVIHGSDSPENAEREINLWFQTQELVPWEPALTSWVYE 149
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.798e-27 Identity = 55/100 (55.00%), Postives = 75/100 (75.00%), Query Frame = 3 Query: 6 AEFGTRPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 302 AE +PFF ++ ++ SGP++A +WEG+ VV+ GRTI+GATNP SAPGTIRGD I GRN+ HGSDSV+SA++EI LWF + ++W+S+ WIYE Sbjct: 54 AEHVGKPFFPKMVSFMKSGPILATVWEGKDVVRQGRTILGATNPLGSAPGTIRGDFGIDLGRNVCHGSDSVDSAEREINLWFKKEELVDWESNQAKWIYE 153
BLAST of CX300853 vs. ExPASy Swiss-Prot
Match: NDK_BRUMA (Nucleoside diphosphate kinase OS=Brugia malayi GN=NDK PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.654e-27 Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = 3 Query: 9 EFGTRPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 302 E +PFF L+ Y++SGPV+AM+WEG VVK R ++GATNP S PGTIRGD +I TGRNI+HGSDS+ SA++EI WF P+ W S+ W+YE Sbjct: 55 ELQGKPFFNDLVGYMSSGPVIAMVWEGLDVVKQARQMLGATNPLNSMPGTIRGDFSIQTGRNIVHGSDSLPSAEREITHWFKPEELCEWSSATATWVYE 153 The following BLAST results are available for this feature:
BLAST of CX300853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300853 ID=CX300853; Name=CX300853; organism=Citrus sinensis; type=EST; length=532bpback to top |