EY702453

Overview
NameEY702453
Unique NameEY702453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: YME1_CAEEL (Protein YME1 homolog OS=Caenorhabditis elegans GN=ymel-1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.324e-23
Identity = 63/184 (34.24%), Postives = 103/184 (55.98%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSK--PYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFK 544
            A  E+GH +   + + A PL KVTI+PRG +    A     ++  LTK Q+     + +GGR AE+++ G  K++TGA +DL K T++    V V+G S+KVGL  F  +++   + K    + +T  +IDAE+   + ++Y R   ++E  K+    +AE LLE E L  D++ RV+  +  K
Sbjct:  460 AYHEAGHTLVSLYTKDATPLHKVTIIPRGQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSDKVGLRDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADEVKRVISGQKIK 643          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.324e-23
Identity = 62/183 (33.88%), Postives = 103/183 (56.28%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL----LTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSF------PQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLL 517
            A  E+GHA+ G  +   +P+ K++I+PRG A  G   + P+E  L     ++  L +   + LGGR AE+V+ G   ++TGA ND  +V+++    +  +GFS+K+G ++       P         K YS  T  I+DAEVRE V KAY R  ++I  H + + ++A+LL+EKE +  ++ +
Sbjct:  522 AYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFM 703          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.409e-22
Identity = 62/183 (33.88%), Postives = 104/183 (56.83%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL----LTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSF------PQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLL 517
            A  E+GHA+ G  +   +P+ K++I+PRG A  G   + P+E  L     ++  L +   + LGGR AE+V+ G   ++TGA ND  +V+++    V  +GFS+K+G ++       P    +    K YS  T  ++DAEVRE V KAYVR  ++I    + + ++A+LL+EKE +  ++ +
Sbjct:  510 AYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFM 691          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.403e-22
Identity = 74/227 (32.60%), Postives = 113/227 (49.78%), Query Frame = 2
Query:   14 ESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRED-------TFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEK----SSAPPETGTVDDGSSPLEP 658
            E+GH V G  LE+A+ + KVTIVPRG A  G+A  +P E+   +T+ +L D     LGGR AE+V  G++STGA ND ++ T +    V  YG SEK+G + F              +  + YS      ID EV+  + + Y R  Q++ E+K+ +  +A+ LL+ E L  + +  ++ E         N    K+   E +     +S   ET  V +   P EP
Sbjct:  429 EAGHTVVGVKLENADMVHKVTIVPRGMAG-GYAVMLPKEDRYFMTQPELLDKIIGLLGGRVAEEVTFGEVSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHEGKLPDDHHLNAHPEKEKASESDVKVNINSKKEETPQV-EAEQPQEP 653          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 62/182 (34.07%), Postives = 100/182 (54.95%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDT-----FEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 532
            A  ESGHAV     + +  + KV+I+PRG AALG+    P EN  L+ K +L     + LGGRAAE V L +ISTGA NDLE+ T +    V+ YG S+  GL+   ++ ++     F   + +S K    +D+ ++  + + YV   Q + ++K+ +  +   L EKEV+  + +  ++ E
Sbjct:  438 AYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVFLQEISTGASNDLERATDIIKGMVSYYGMSDVSGLMVLEKQRNSFLGGGFGSGREFSEKMAEEMDSFIKNLLEERYVHVKQTLSDYKDAIEVMVNELFEKEVITGERVREIISE 619          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 69/230 (30.00%), Postives = 114/230 (49.57%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSF------PQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 673
            A  E GH +A W +   EP+ KVTI+ RG    G A  VP E+  L T+ ++       +GGRAAE+++  + +TGA +D+E+ TK+  + V  +G S K+G + +      P    T      YS +    ID EVR+ +  A+    +++ E+++ +  +A  LLEKE LH+ +L  +  +   K   LT +D F      ++     P    ++ G    +P   PA
Sbjct:  423 AYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPA 650          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 69/230 (30.00%), Postives = 114/230 (49.57%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSF------PQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 673
            A  E GH +A W +   EP+ KVTI+ RG    G A  VP E+  L T+ ++       +GGRAAE+++  + +TGA +D+E+ TK+  + V  +G S K+G + +      P    T      YS +    ID EVR+ +  A+    +++ E+++ +  +A  LLEKE LH+ +L  +  +   K   LT +D F      ++     P    ++ G    +P   PA
Sbjct:  423 AYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPA 650          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 69/230 (30.00%), Postives = 114/230 (49.57%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSF------PQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 673
            A  E GH +A W +   EP+ KVTI+ RG    G A  VP E+  L T+ ++       +GGRAAE+++  + +TGA +D+E+ TK+  + V  +G S K+G + +      P    T      YS +    ID EVR+ +  A+    +++ E+++ +  +A  LLEKE LH+ +L  +  +   K   LT +D F      ++     P    ++ G    +P   PA
Sbjct:  423 AYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPA 650          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.992e-22
Identity = 62/182 (34.07%), Postives = 100/182 (54.95%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL----LTKEQLFDMTCMTLGGRAAEQVL-LGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSF------PQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLL 517
            A  E+GHA+ G  +   +P+ K++I+PRG A  G   + P+E  L     ++  L +   + LGGR AE+V     ++TGA ND  +V+++    V  +GFS+K+G ++       P         K YS  T  I+D EVRE V KAY R  Q+I  H + + ++A+LL+EKE +  ++ +
Sbjct:  513 AYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVFGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFM 693          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22
Identity = 70/230 (30.43%), Postives = 113/230 (49.13%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSF------PQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 673
            A  E GH +A W +   EP+ KVTI+ RG    G A  VP E+  L T+ ++       +GGRAAE+++  + +TGA +D+EK TK+  + V  +G S K+G + +      P    T      YS +    ID EVR+ +  A+    +++ E+++ +  +A  LLEKE LH+ +L  +      K   LT +D F      ++     P    ++ G    +P   PA
Sbjct:  423 AYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAVSDIEKATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQADYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIFASVE-KRPRLTMFDDFGGRIPSDKPPIKTPGELAIERGEPWPQPVPEPA 650          
The following BLAST results are available for this feature:
BLAST of EY702453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
YME1_CAEEL6.324e-2334.24Protein YME1 homolog OS=Caenorhabditis elegans GN=... [more]
FTSH1_ARATH6.324e-2333.88Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH5_ARATH1.409e-2233.88Cell division protease ftsH homolog 5, chloroplast... [more]
FTSH_BACPF2.403e-2232.60Cell division protease ftsH homolog OS=Bacillus ps... [more]
FTSH_HELFE5.354e-2234.07Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_MYCTU6.992e-2230.00Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCTA6.992e-2230.00Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCBO6.992e-2230.00Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MEDSA6.992e-2234.07Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_MYCLE9.132e-2230.43Cell division protease ftsH homolog OS=Mycobacteri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-B05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702453 ID=EY702453; Name=EY702453; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGATGAATCCGGCCATGCTGTTGCTGGATGGTTTCTGGAAC
ATGCAGAACCCTTGTTAAAAGTGACAATTGTTCCTCGAGGGACAGCTGCA
CTTGGATTTGCCCAGTATGTCCCTAACGAGAACCTTCTTCTGACAAAGGA
GCAGCTTTTTGATATGACGTGTATGACCCTTGGCGGTCGAGCAGCTGAGC
AGGTTTTGTTGGGGAAGATATCTACTGGAGCTCAAAATGACTTGGAGAAG
GTAACAAAGATGACCTATGCCCAAGTTGCCGTGTATGGTTTTAGCGAAAA
GGTTGGTCTCTTGTCTTTCCCACAAAGAGAAGACACATTCGAAATGAGTA
AGCCATACAGTAGCAAGACTGGGGCAATCATAGATGCCGAGGTTCGAGAA
TGGGTAGGCAAGGCATATGTACGCACAGTCCAACTTATTGAGGAACACAA
AGAGCATGTAGCTCAGATTGCCGAGTTATTGCTTGAAAAGGAAGTTCTTC
ACCAAGATGATCTGCTTCGAGTTCTGGGTGAACGGCCATTCAAATCCAGT
GAGCTCACAAATTATGACAGATTCAAGCAAGGTTTCGAAGAGGAAGAGAA
GAGCTCAGCGCCCCCAGAGACTGGAACCGTGGATGATGGTTCTTCACCAC
TCGAGCCTCAGGTTGCTCCGGCATGAGAAACCATGTAGGTTAAATGTTTG
TAATTCATACTTGAGATGATTTTTTCTTTTTTTTTCCCCGCCCGGTGGGA
TTAGGGTACTCTGGAATTTGTAATCATATTCATAGGGGTCCATTTTTATT
TTAATTTATCCCTAGGATCTTTCTGACGGATGAAGTCTCTATTTGTCAAT
TTGTAGACCCCGAGTTAGGCTGTTTTATTGACGT
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