EY702453

Overview
NameEY702453
Unique NameEY702453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.365e-17
Identity = 52/178 (29.21%), Postives = 94/178 (52.81%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 532
            A  E GHA+     E A P+ K TIVPRG      +Q    +    +++Q+     +++ GR AE+++ G  ++++GA +D +  TKM  A V  YG S+++G +S+   +D     K  S++T  +I+ EV+  +  AY     ++ +H +    +A+ LLE E L    + ++L +
Sbjct:  480 AYHEGGHALVAIHTEGARPVHKATIVPRGRTLGMVSQLPEKDETSFSRKQMLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATKMARAMVTKYGMSKQLGFVSYNYEDD----GKSMSTETRLLIEQEVKSLLENAYNNAKTILTKHSKEHHVLAQALLEHETLTGAQIKKILAQ 653          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 60/184 (32.61%), Postives = 99/184 (53.80%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTF-----EMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 532
            A  E+GHA+    L +  P+ KVT++PR  A  G   ++  NE  LL+K QL  M  + LGGRAAE+ + G  +++TGA NDL++VT +    V  +G S    L      E+ F      +    S +  A IDA+VR  +   Y + ++L++ ++  + +I E L+EKE L   +  +++ +
Sbjct:  413 AYHETGHALTATLLPNHPPVQKVTLIPRRQAK-GLTWFMQDNERDLLSKSQLMSMIMVALGGRAAEEAVFGNAEVTTGASNDLQQVTNLARQMVTRFGMSSLGPLCLETGNEEIFLGRDMRLMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKEFRQLVSQ 595          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 65/226 (28.76%), Postives = 114/226 (50.44%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA 673
            A  E GHA+     E A P+ K TIVPRG  ALG    +P+ +   ++++Q+     + +GGR AE+++ G  ++++GA +DLE+ TK+  A V  +G S++VGL++    ++     K  S++T  +I++EV++ + KAY     ++  + + +  +A  LL+ E L    +  +L +         N    ++  E   K S P    T    SS      A A
Sbjct:  484 AFHEGGHALVAIHTEGALPVHKATIVPRG-MALGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKFGMSKEVGLVAHNYDDN----GKSMSTETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELLTD--------LNSPLLQKRQEVVTKQSNPVPPSTPSSASSAAAAAAAAA 696          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 56/189 (29.63%), Postives = 94/189 (49.74%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTF---EMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSE 553
            A  E GHA+ G +   A P+ K TI+PRG A LG  Q +P  +     +EQ+     + + GR AE+++ GK  +++GA +D++  T +  A V   G S+ +G +      D     + S   S  T  +IDAEV++ + + Y     ++ +H + +  +A  L+E E L    +  +L  R   S E
Sbjct:  415 AYHEGGHALVGLYCPAASPIHKATIIPRGNA-LGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGKNKVTSGAASDIKGATNIARAMVTKAGLSDLIGPIFHGSSSDDMYGRQQSNEISEATAKLIDAEVKKIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRALDSEE 602          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 56/189 (29.63%), Postives = 93/189 (49.21%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTF---EMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSE 553
            A  E GHA+ G +   A P+ K TI+PRG A LG  Q +P  +     +EQ+     + + GR AE+++ G  K+++GA +D++  T +  A V   G S+ +G +      D     + S   S  T  +IDAEV+  + + Y     ++ +H + +  +A  L+E E L    +  +L  R   S E
Sbjct:  415 AYHEGGHALVGLYCPAASPIHKATIIPRGNA-LGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIFHGSNSDDMYGRQSSNEISEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRALDSEE 602          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_RICFE (Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 57/189 (30.16%), Postives = 94/189 (49.74%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTF---EMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSE 553
            A  E GHA+ G +   A PL K TI+PRG  ALG  Q +P  +     +EQ+     + + GR AE+++ G  K+++GA +D++  T +  A V   G S+ +G +      D     + S   S  T  +IDAEV++ + + Y     ++ +H + +  +A  L+E E L    +  +L  R   S E
Sbjct:  415 AYHEGGHALVGLYCPAASPLHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIFHGSSSDDMYGRQPSNETSEATAELIDAEVKKIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRALDSEE 602          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17
Identity = 57/177 (32.20%), Postives = 98/177 (55.37%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL 526
            A  ESGHA+  ++ + A P+ K TI+PRG   LG    +P N+     + QL     +++GGR AE+++ G   I+TGA +D +  TK+    V  +G SEK+G++++    DT ++    S +T + I+ E+R  + ++Y R   +++ H +    +AE LL  E L   ++  VL
Sbjct:  539 AYHESGHAIIAYYTKDAMPINKATIMPRG-PTLGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVL 707          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.186e-17
Identity = 65/229 (28.38%), Postives = 105/229 (45.85%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSSPLEPQVAPA*ET 682
            A  E+GHA+       + PL KVTI+PRG A  G   ++  +++  +T+ QL     + +GGR  E+++ G  K++ GA +D  K T +    V  +GFS K+G    P  +D     +     T  +ID EV + +  +  R   L+    +    +AE LL  E L +D++L VL  +                         PP+T +V   S+ L PQ+ P+  T
Sbjct:  423 AFHEAGHALVALLTADSIPLHKVTIIPRGEAG-GLTSFLQEKDISFMTRAQLLAQLDVLMGGRVGEELVFGADKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRVIPDTQD-----EQLGEATRDLIDKEVDQLLNDSLTRVRTLLSSQSKQHKLLAEALLHFETLTKDEVLAVLAGK-----------------------MKPPKTQSVTSKSTTLLPQLGPSTST 622          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.186e-17
Identity = 61/186 (32.80%), Postives = 97/186 (52.15%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSF----PQREDTFEMS---KPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 532
            A  E GHA+ G      +P+ KVT++PRG A  G   ++P ++  L++++QLF      LGGRAAE+++ G+  ++TGA  DL+++T +    V  +G S+ +G  S      Q  D           S K    ID  V+    +AY   +  I  ++E + +I E+LLEKE L  D+   +L E
Sbjct:  473 AYHEVGHAICGTLTPGHDPVQKVTLIPRGQAR-GLTWFIPMDDPTLISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAKQMVVTFGMSD-IGPWSLMDSGAQSGDVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSE 656          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.773e-17
Identity = 60/184 (32.61%), Postives = 96/184 (52.17%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRED------TFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQ---DDLLR 520
            A  E+GH + G  +   +P  KVTI+PRG A LG   ++P  + L    Q  +    TL GGR AE+++ G   +STGA ND++  T +    V  +GFSEK+G L + + E       +   +K  S +T  IID EV+  +   Y R   ++ E+ + +  + E L++ E +     DDL++
Sbjct:  412 AYHEAGHVIIGRLVPDHDPAHKVTIIPRGRA-LGVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETIDAFQIDDLMK 594          
The following BLAST results are available for this feature:
BLAST of EY702453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FTSH4_ORYSJ1.365e-1729.21Cell division protease ftsH homolog 4, mitochondri... [more]
FTSH_CYAME1.782e-1732.61Cell division protease ftsH homolog OS=Cyanidiosch... [more]
FTSH4_ARATH1.782e-1728.76Cell division protease ftsH homolog 4, mitochondri... [more]
FTSH_RICTY2.328e-1729.63Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICPR2.328e-1729.63Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICFE2.328e-1730.16Cell division protease ftsH homolog OS=Rickettsia ... [more]
YMEL1_RAT3.971e-1732.20ATP-dependent metalloprotease YME1L1 OS=Rattus nor... [more]
YME1_SCHMA5.186e-1728.38Protein YME1 homolog OS=Schistosoma mansoni PE=2 S... [more]
FTSH2_ORYSJ5.186e-1732.80Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH_BUCAI6.773e-1732.61Cell division protease ftsH OS=Buchnera aphidicola... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-B05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702453 ID=EY702453; Name=EY702453; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGATGAATCCGGCCATGCTGTTGCTGGATGGTTTCTGGAAC
ATGCAGAACCCTTGTTAAAAGTGACAATTGTTCCTCGAGGGACAGCTGCA
CTTGGATTTGCCCAGTATGTCCCTAACGAGAACCTTCTTCTGACAAAGGA
GCAGCTTTTTGATATGACGTGTATGACCCTTGGCGGTCGAGCAGCTGAGC
AGGTTTTGTTGGGGAAGATATCTACTGGAGCTCAAAATGACTTGGAGAAG
GTAACAAAGATGACCTATGCCCAAGTTGCCGTGTATGGTTTTAGCGAAAA
GGTTGGTCTCTTGTCTTTCCCACAAAGAGAAGACACATTCGAAATGAGTA
AGCCATACAGTAGCAAGACTGGGGCAATCATAGATGCCGAGGTTCGAGAA
TGGGTAGGCAAGGCATATGTACGCACAGTCCAACTTATTGAGGAACACAA
AGAGCATGTAGCTCAGATTGCCGAGTTATTGCTTGAAAAGGAAGTTCTTC
ACCAAGATGATCTGCTTCGAGTTCTGGGTGAACGGCCATTCAAATCCAGT
GAGCTCACAAATTATGACAGATTCAAGCAAGGTTTCGAAGAGGAAGAGAA
GAGCTCAGCGCCCCCAGAGACTGGAACCGTGGATGATGGTTCTTCACCAC
TCGAGCCTCAGGTTGCTCCGGCATGAGAAACCATGTAGGTTAAATGTTTG
TAATTCATACTTGAGATGATTTTTTCTTTTTTTTTCCCCGCCCGGTGGGA
TTAGGGTACTCTGGAATTTGTAATCATATTCATAGGGGTCCATTTTTATT
TTAATTTATCCCTAGGATCTTTCTGACGGATGAAGTCTCTATTTGTCAAT
TTGTAGACCCCGAGTTAGGCTGTTTTATTGACGT
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