EY702453

Overview
NameEY702453
Unique NameEY702453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17
Identity = 58/184 (31.52%), Postives = 98/184 (53.26%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSE--KVGLLSFPQREDT---FEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 532
            A  E GHAV G      + + KVT++PRG A  G   ++P+++  L++K+QLF      LGGRAAE+++ G  +++TGA  DL+++T +    V  +G S+     L+    + D           S K    ID+ V++    AY   +  I+ ++E + ++ E+LLEKE +  D+   +L E
Sbjct:  486 AYHEVGHAVCGTLTPGHDAVQKVTLIPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQMVTTFGMSDIGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSE 668          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16
Identity = 59/183 (32.24%), Postives = 97/183 (53.01%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRED------TFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEV---LHQDDLL 517
            A  E+GH + G  +   +P  KVTI+PRG A LG   ++P  ++L    Q  +    TL GGR AE+++ G   +STGA ND++  T +    V  +GFS+K+G L + + E       +   +K  S +T  IID EV+  +   Y R  +++ E+ + +  + + L++ E    L  DDL+
Sbjct:  412 AYHEAGHVIIGRLVPDHDPAHKVTIIPRGQA-LGITFFLPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETIDSLQIDDLM 593          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16
Identity = 56/174 (32.18%), Postives = 94/174 (54.02%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRED------TFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVL 499
            A  E GHA+ G      +P+ KVT++PRG A  G   + P+E+  L+T+ Q+       LGGR AE+V+ G  +++TGA ND+EK+T +    V   G S  +GL++  +  D       +     YS    A ID E++  V  A+ R  ++IEE++  +  + + L+++E +
Sbjct:  470 AYHEVGHALIGTLCPGHDPVEKVTLIPRGQAQ-GLTWFTPDEDQSLMTRNQMIARIAGLLGGRVAEEVIFGDDEVTTGAGNDIEKITYLARQMVTKLGMS-SLGLVALEEEGDRNFSGGDWGKRSEYSEDIAARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETI 641          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.574e-16
Identity = 59/185 (31.89%), Postives = 99/185 (53.51%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEM--------SKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL 526
            A  E GHA+ G  L+  + + K+T+ PRG  A G   + P E+  LL++  L      TLGGRAAEQV+ G+  ++TGA +DL++VT +    V  +G S  +G L+  + E T ++           Y+      ID EVR+ +   Y + ++++ +++  +  I E LL+KE +  D+   +L
Sbjct:  445 AYHEVGHAITGSVLKSHDEVEKITLTPRG-GAKGLTWFTPEEDQSLLSRSALLARIITTLGGRAAEQVIFGEPEVTTGASSDLQQVTNLARQMVTRFGMSN-IGPLAL-EDESTGQVFLGGNMASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFRELL 626          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 61/187 (32.62%), Postives = 99/187 (52.94%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN--LLLTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGFSEKVG--LLSFPQREDTFEMSK-----PYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGE 532
            A  E GHAV        + + KVT++PRG A  G   ++P E    L++++Q+F      LGGRAAE+V+ G+  ++TGA  DL++VT++    V  +G SE +G   L+ P  +    + +       S +  A IDA VR  V +AY      +  ++  + Q+ ++L+EKE L  D+   +L E
Sbjct:  481 AYHEIGHAVCATLTAGHDEVQKVTLIPRGQAR-GLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGAAGDLQQVTRVARRMVTAFGMSE-IGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAAVRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSE 665          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.081e-14
Identity = 55/178 (30.90%), Postives = 94/178 (52.81%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL-LTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYS-----SKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDL 514
            A  E+GHAV G  ++    + K+TI+PRG A  G+    P E     +K++L       +GGRAAE ++ GK  ISTGA +D+ + TK+    V  +G S  +G + + +  +   + + YS     SK    ID E+R+ +  +    ++ IE++ E +  I + LLE E +  +++
Sbjct:  472 AYHEAGHAVVGLKVKGGNKVQKITIIPRGNAG-GYNLMTPEEEKYNASKKELLATIASYMGGRAAEMIIYGKENISTGASDDISRATKIARKMVTEWGMS-ALGPIKYEEDTENPFLGRDYSKGTFGSKMAHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEEI 647          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14
Identity = 61/213 (28.64%), Postives = 104/213 (48.83%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN--LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMS-KPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGT 628
            A  E+GHA+ G  +   + + K+TI+PRG A  G+    P      L  K  L  M    +GGRAAE+ + G  +I+TGA +D  K T +  A V   G S K+G + +   + T   + K YS +T   ID E+   + + Y +   +I+ +++ +  + E LL  E + + D +  + +      E+    + +Q  ++  KS   PE+ T
Sbjct:  491 AYHEAGHALVGLHVHSNDEVQKITIIPRGQAG-GYTLSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMVTQLGMS-KLGQVQYVPSQGTLPSNVKLYSEQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETILKSD-IDFIHKNTKLPPEILLQKQEQQAKQKLNKSEVKPESET 700          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 53/175 (30.29%), Postives = 89/175 (50.86%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN--LLLTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEM-SKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDL 514
            A  E+GHA+ G  +   + + K+TI+PRG A  G+    P      L  K  L  M    +GGRAAE+ + G  +I+TGA +D  K T +  A V   G S K+G + +   + T    +K +S +T   ID E+   + + Y +   +I+ +++ +  + E LL  E + + D+
Sbjct:  488 AYHEAGHALVGLHVHSNDEVQKITIIPRGQAG-GYTLSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGPLEITTGASSDFYKATNIARAMVTQLGMS-KLGQVQYVPSQGTVPPGTKLFSEQTAKDIDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETILKSDI 660          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.749e-13
Identity = 58/190 (30.53%), Postives = 98/190 (51.58%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN-ENLLLTKEQLFDMTCMTLGGRAAEQVLLGKIST--GAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL-GERPFKSSELTN 562
            A  E+GHA+   +   A PL K TI+PRG  ALG    +P  + + +TK +      + +GG+ AE+++ GK +T  G  +DL+  T    A V  YG S+ VG ++  +  ++      +S+K   I D EV E +  +  R  +L+ +    + ++A+ L+E E L   ++ +V  GE+  K    TN
Sbjct:  538 AFHEAGHAIMAKYTNGATPLYKATILPRG-RALGITFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNLSENWES------WSNKIRDIADNEVIELLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAHEIEQVCKGEKLDKLKTSTN 720          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 61/205 (29.76%), Postives = 100/205 (48.78%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEP----LLKVTIVPRGTAALGFAQYVPN--ENLLLTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRED---TFEMSKPYSSKTGAIID---AEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQ 580
            A  E GHAV G  + +  P    + K++I+PR   ALGF    P   +  LL  ++L       LGGRAAE+V+L G++STGA +D+ + T M Y  VA YG ++++G +S     +         P+    G ++D    EV+  +  A    + ++  +   +  +   L E E +  ++L   L +      ELT++ R KQ
Sbjct:  609 ARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVVLSGRVSTGALDDIRRATDMAYKAVAEYGLNQRIGPISVATLSNGGLDESGGSPWGRDQGHLVDLVQREVKALLQSALDVALSVVRANPTVLEGLGAYLEENEKVEGEELQEWL-KSVVAPKELTSFIRGKQ 812          
The following BLAST results are available for this feature:
BLAST of EY702453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FTSH2_ARATH8.845e-1731.52Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH_BUCAP1.155e-1632.24Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH2_SYNY31.971e-1632.18Cell division protease ftsH homolog 2 OS=Synechocy... [more]
FTSH_ODOSI2.574e-1631.89Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH6_ORYSJ1.277e-1532.62Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH_MYCPU1.081e-1430.90Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_MYCGE1.844e-1428.64Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_MYCPN2.663e-1330.29Cell division protease ftsH homolog OS=Mycoplasma ... [more]
YME1_YEAST7.749e-1330.53Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 P... [more]
FTSH7_ORYSJ1.012e-1229.76Cell division protease ftsH homolog 7, chloroplast... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-B05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702453 ID=EY702453; Name=EY702453; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGATGAATCCGGCCATGCTGTTGCTGGATGGTTTCTGGAAC
ATGCAGAACCCTTGTTAAAAGTGACAATTGTTCCTCGAGGGACAGCTGCA
CTTGGATTTGCCCAGTATGTCCCTAACGAGAACCTTCTTCTGACAAAGGA
GCAGCTTTTTGATATGACGTGTATGACCCTTGGCGGTCGAGCAGCTGAGC
AGGTTTTGTTGGGGAAGATATCTACTGGAGCTCAAAATGACTTGGAGAAG
GTAACAAAGATGACCTATGCCCAAGTTGCCGTGTATGGTTTTAGCGAAAA
GGTTGGTCTCTTGTCTTTCCCACAAAGAGAAGACACATTCGAAATGAGTA
AGCCATACAGTAGCAAGACTGGGGCAATCATAGATGCCGAGGTTCGAGAA
TGGGTAGGCAAGGCATATGTACGCACAGTCCAACTTATTGAGGAACACAA
AGAGCATGTAGCTCAGATTGCCGAGTTATTGCTTGAAAAGGAAGTTCTTC
ACCAAGATGATCTGCTTCGAGTTCTGGGTGAACGGCCATTCAAATCCAGT
GAGCTCACAAATTATGACAGATTCAAGCAAGGTTTCGAAGAGGAAGAGAA
GAGCTCAGCGCCCCCAGAGACTGGAACCGTGGATGATGGTTCTTCACCAC
TCGAGCCTCAGGTTGCTCCGGCATGAGAAACCATGTAGGTTAAATGTTTG
TAATTCATACTTGAGATGATTTTTTCTTTTTTTTTCCCCGCCCGGTGGGA
TTAGGGTACTCTGGAATTTGTAATCATATTCATAGGGGTCCATTTTTATT
TTAATTTATCCCTAGGATCTTTCTGACGGATGAAGTCTCTATTTGTCAAT
TTGTAGACCCCGAGTTAGGCTGTTTTATTGACGT
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