EY702453

Overview
NameEY702453
Unique NameEY702453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.322e-12
Identity = 61/183 (33.33%), Postives = 88/183 (48.09%), Query Frame = 2
Query:    5 ASDESGHAVAGW----FLEHAEPLLKVTIVPRGTAALGFAQYVP---NENLLLTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLG 529
            A  E+GHAV G      L     + K++I+PR   ALGF  Y+P    +  LL  ++L       LGGRAAE+V+  G+ISTGA +D+ + T M Y  VA YG +EK+G +S              +   G I D+    W G+     V L++    ++ Q A  +    V    D+L  LG
Sbjct:  592 ARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFT-YIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSGRISTGALDDIRRATDMAYKAVAEYGLNEKIGPVSVA------------TLSAGGIDDSGGSPW-GRDQGHLVDLVQREVTNLLQSALDVALTVVRANPDVLEGLG 760          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 58/188 (30.85%), Postives = 95/188 (50.53%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEH---AEPLL-KVTIVPRGTAALGFAQYVP---NENLLLTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRED---TFEMSKPYSSKTGAIID---AEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVL 526
            A  E+GHAV G  + +    +P + K++I+PR   ALGF  Y+P    +  LL  ++L       LGGRAAE+V+  G+ISTGA +D+ + T M Y  VA YG ++K+G +S               P+    G ++D    EV   +  A    + ++  + + +  +   L EKE +  ++L + L
Sbjct:  588 ARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFT-YIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTGAFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWL 774          
The following BLAST results are available for this feature:
BLAST of EY702453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FTSH9_ARATH1.322e-1233.33Cell division protease ftsH homolog 9, chloroplast... [more]
FTSH7_ARATH1.119e-1130.85Cell division protease ftsH homolog 7, chloroplast... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-B05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702453 ID=EY702453; Name=EY702453; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGATGAATCCGGCCATGCTGTTGCTGGATGGTTTCTGGAAC
ATGCAGAACCCTTGTTAAAAGTGACAATTGTTCCTCGAGGGACAGCTGCA
CTTGGATTTGCCCAGTATGTCCCTAACGAGAACCTTCTTCTGACAAAGGA
GCAGCTTTTTGATATGACGTGTATGACCCTTGGCGGTCGAGCAGCTGAGC
AGGTTTTGTTGGGGAAGATATCTACTGGAGCTCAAAATGACTTGGAGAAG
GTAACAAAGATGACCTATGCCCAAGTTGCCGTGTATGGTTTTAGCGAAAA
GGTTGGTCTCTTGTCTTTCCCACAAAGAGAAGACACATTCGAAATGAGTA
AGCCATACAGTAGCAAGACTGGGGCAATCATAGATGCCGAGGTTCGAGAA
TGGGTAGGCAAGGCATATGTACGCACAGTCCAACTTATTGAGGAACACAA
AGAGCATGTAGCTCAGATTGCCGAGTTATTGCTTGAAAAGGAAGTTCTTC
ACCAAGATGATCTGCTTCGAGTTCTGGGTGAACGGCCATTCAAATCCAGT
GAGCTCACAAATTATGACAGATTCAAGCAAGGTTTCGAAGAGGAAGAGAA
GAGCTCAGCGCCCCCAGAGACTGGAACCGTGGATGATGGTTCTTCACCAC
TCGAGCCTCAGGTTGCTCCGGCATGAGAAACCATGTAGGTTAAATGTTTG
TAATTCATACTTGAGATGATTTTTTCTTTTTTTTTCCCCGCCCGGTGGGA
TTAGGGTACTCTGGAATTTGTAATCATATTCATAGGGGTCCATTTTTATT
TTAATTTATCCCTAGGATCTTTCTGACGGATGAAGTCTCTATTTGTCAAT
TTGTAGACCCCGAGTTAGGCTGTTTTATTGACGT
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